Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g57480 | OGI:01099640 | 13/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:33210230-33216333 | ||||||||
| Gene Symbol | SDS2, OsSDS2 | ||||||||||
| DNA seq | GAAGGTCCATCAAACGCTGCCCCCTGCTGGGACCGGCTCGGCCATGGCTCGTCGGTGGCGGCGGCGGAGGAGGAGAGGAGGAGGAGGAGGAGGTGGAGGAGGAATTGCAGGTGAGGTGATATTCTCACGCTTAGGACCTAGTGATGTCCTACTAGCATCGTTTTATCCAAGCGCCCCTTCTCGGTTTCGTATCGTCTTGTCCGCGAGGCCAGTGCCTGCAAGCCTTTCAAGTGTCGTGAATGCTTTTGGTTTGGTGAATCGCTCTAATTGTTTCCCGTATTCCTGCAGATCGAAACCGGTGCACTGTGCTTGCAACAAAAATTGTGGCTACAGAACTCTGTCAATGGAAGGAGTAGGGAGATGCTACAATAGAAATGATTTTTTTTCCTTTTTTTTTTCAGGGATACAACAGAAAGGAGTTGGTGGAAGAGTGAAATTGGAATTTATTATTCTCCAATTATTTTCTGTGAATCTGTTCTCAAATGTAGACAACATATCGTGGGGCAGATAAACCGGTGGAAATTCTCTGTGCCACCAATGATACAAGTACTTGAGTTGATGGATAGTCACTTCCCAGTCAACACAGGAGAATTGGTTTGATGCTTTGATGTTGATGGTACCACCATGGAGAATGCAAGTAAGAAGAAAGGTATTTATGGGTTAATGGTGCCACCACTGCGATCAGAAGAGTTCAAACAGTTAGTCACATGGTCAAAATTCAGCTATTGGGCCAAAAGAACTACATCCATTCTTGACCTAGTCAATAAGCAGCACTTATTCAATCAATTATTGTCTTATTGTTGTTCAATGTCATGTCATAGATTAGTTTCCTTGGCATGTGTTGACCGCAAGTCTGCAACGTAGACTTCACGGTAAAACACCATATGAAGTTCAAGCTGACAACTCTCAATGTATTGTCCAGAGAAGTTTTGTTATTTGGAACTGCGGCGAAAGGAATTTCCACGCTTTATTTCCAACCTGTCCTTCGGATGAATCTAGAGGTGTGCTAATATGCTTGTATTCTTTGCTTATTCCTTCATTTCAATCCCTATTCATCACTTTAGTTGTGTTTTTCTTTTCTGTTACTTAACCGTCTTTCAAATACAATTTGTTTTGGTTCAAAACTAGCTGATTGGTCTTTTCTGGGAGCCATGATGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAGAAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCATAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATCGATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACAGGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGGTCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGAAAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGTATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGACTCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGGATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCATTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTTCTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCAATTTTCTTCAAATGTAACAATTCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATTGTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGGATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAGGACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTGCAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAGAAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGTACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAACTTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCAGAAGTAGAATCTGGAAGAAACTCAGGTAAGTATTGTATCTGTAGAAAGACTGCAAGAATTCAGCATATATCATGAAAAGTCTCAGTTATCTGCAAGTAGAGTTGTTTATGATATCAAATTCTGTAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTGATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGGAGTCAAAACAAAGGTACCAATATTAACTCATCATAACTGCAAACTGATGATAAAAACTGCATGCAATAACTATGCACAGCAGGTATAACACATGAGGAGGATTATTTTGTTATTGTGCATCAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACGGACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCCTTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGGGGGTTTGGTCCTGTGTACAAGGTAACCTTTTCTTCAATTTCGTACTATCTGACTTATTAGCTGGCATGCTGAAGTTAGATTTGTGTCTGGGGCCTCTGGGTTTGCAATCTACATCTGCAGATTCAGTTTTAAGCAAGCAACAGTAGTGAAGGCCCGGTGAATTGATGCCTGGGCTTGCAATCTACACCTGCAGATTTAGTTTTAGCCAAGTAACAGTAGTGATGACCCCTACCAATATACCACACAATTCAATAAATTTGGATTTTGGAGAGCTAGAGGAATGGAATATATAATTATTCCAACCATGAAGCCTGAGTTCTTTTCTATTTTAGGGGAGACAGATCTGAGTGGAATAATCTTTCGGGAATATATTTCTTTGTTATGTACACAAAATGTACAAGTGGATAACCAACCCCTGCTTGACAAGTCACATCAAATAAAACCTGTCGTAGCACCTCTACTTATTACACAATGGTATTCGCAATAGAACTAGCGCTAACTTGAGGTGTAGTGGCTTAGGAGTGTTCCCCTCAAACTCAAGCATGCAAGGCAACTTTTCACCATAAACATCTAATATAACTCGAGTTAGATTAAACATCTAATATAACTCGAGTTAGGAATGATCAGTTTGTTTAAACATCACGAGTTTGCAAGCACAACAGAGTTTGTTCAAGCCAGTGGTCAAAGATGGTAGCCTGTAAGCTTTTCATAATTGATGTTGTGACCAAAGTTCATTGCCCCTTTTGTTGGGAGGGCTATAGGGGAATTTAGGTAGGTGGGTACTACTGAAGCGGTATGGGGCAAAAGAGCAATTGAGTTGGTGTCGGAAAAAAAACAGGTGAGAATGAGAAACTAGAGGGAAAGGAGTTGTTTTTTGTTTGGTGGGGGATGAGTAGTAGGGTGGTGTGAGAAACGCCTAGGGGTCTTCCGGCTAGCTCCACAAAGTGGTGGGCTAGACGACCTGGGTTCGAAGCCTCACCCCTTCTAATTATTTGATATTAAGTCCTTCCCTAATATTCGTGTCTTTTTGAGTAGTAGGGTGGTGTAATCACAGTAAACTTTGCGAAGTTGACTATGGGCAGTGACTTACCAAGTTCAGAGCCTCATGTCTCTTATGTCATTAATTAACTAGCAAAATAAAAAAAATCTACCTAATCCCTGTGAAGTATGCTTATTCGTCCACTTAGCCTTCTTAGACCTCGTCTGGATGGGTCTCAATCCCTGGCGATCCATGGCTGGGATTTTGAACTAAAAACCTGGCCCTTATAACAAGGTCTCAAGTGCATAATCAGGTATTTTATCCCTTGACTGTGTAAGGAGGTAATTTTGCCTCTGTGTCAAATAACATGGCTGACACATTACCATCACGTTATGTTAAAAAATAATAAGGTCCACTTGTTAAGTTGTCAGAGGCAAGCTTAATTCCCCTTCAAAAATTCCTCGGCAGGACCTACTCATCACTTTGATATAGAGACTGATTGTTAATTAAAATATTTTTAGTTGCCGAGTTGGTCTTAATTGCTCCAAATCATGTCCTGTGTGACTGTCAAAACCGCTCAACGTCACTGGCCACGTGTCAAAACCATCTCCAAAACCCAGCCCAGAGGATTAAATAGACTTTTTCCCATAAACAAAACTTGATACATTAGTTTACAAGATTATTTGCAATAAATTGTGTACAGTTGAACATATCACCCTCTTTATTTAATATCGATACTCATTTGTGCTTCATGTCAAGCAACAGTTATGCTGTTTTTACAAATACATCTTAGATTTAAGAGCATCAGGCCACCAAAGTGCAAGTTCTGTGGCATTCAGTTATTTTGCCTTGAAACAGTCTCTACGATTTAACCTTTTCGAACCATTATCCAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGGCTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCAAAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAGATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGGTGTGTTCTCTTTTCCTTTCTTAATGTATGTCCTTTATCCCCCACCCCTTACCCCTTCCCAATAGCTTTCTTTAAATAACTAGTTTGTTGTGTCTTCTTAAAGAAAAATCAAGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGTCTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATATTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATAGTAAGTATTGCCTGCTTCAAATTTGCATTCGGCACATACACTGAATAGGTGCATTGACAAATGGATGTTGAATTCACTGGACTATTGTTTTTTTTTTCAGTGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGTCAGTAGTCTCTACATTTCTGAAACAATGTCACAAATAAATAGCTAGCTGATACTGAACTTTTCAGGCCTGGGAGTTATGGAGGGAAGGCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTTGGCCTGATGTGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAGGCAGCCTGCTTTCCTCTCCATTGTGCTTCCAGCCGAAATGGATGCCCATGATGGATCCTTTTCTCAAAATGCAATGACAATTACTGATCTGGAGGGTAGATAATAATATCATGTCCACCTGTCCAGCATATGCTGTTCTTAAAGCTTGATCAAATCCATTTGGCATAATGTATTGTATGTTCTTACAGCTGGACATGCTTATTGATTGACAGAGAAAAATCTGAAAATTGATGAGTTTCA
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| CDS seq | ATGATGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAGAAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCATAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATCGATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACAGGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGGTCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGAAAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGTATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGACTCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGGATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCATTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTTCTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCAATTTTCTTCAAATGTAACAATTCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATTGTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGGATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAGGACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTGCAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAGAAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGTACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAACTTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCAGAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTGATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGGAGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACGGACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCCTTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGGGGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGGCTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCAAAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAGATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCAAGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGTCTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATATTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAGGCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTTGGCCTGATGTGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAGGCAGCCTGCTTTCCTCTCCATTGTGCTTCCAGCCGAAATGGATGCCCATGATGGATCCTTTTCTCAAAATGCAATGACAATTACTGATCTGGAGGGTAGATAA
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| Protein seq | MMWKRSSCREVITLLIMSLWLERCLGTDSISANETLPDGQTIVSMKNVFVLGFFSPGASSHRYVGIWYSNPVNRTIVWVANRNEPLLDASGVLMFDVNGNLVIAHGGRSLIVAYGQGTKDMKATILDSGNLALSSMANPSRYIWQSFDSPTDTWLPEMKIGLRTTNQTLISWSSIDDPAMGDYKLGMDPAGLSHPAGLSQFIVWWRGNNFWTSGHWSGDMFSLIPELKFFTTIPIFFKCNNSTNDITCTYSANPSDRMTKIVLNSTGSLSIMQFDSLEKSWILLWRQPSTCEVHNLCGAFGICNDNDAVPKCYCTKGFVPQDIIAYTNGYTREGCNRQTKLQCSSDEFFEIPNVRLPDNRKKLPVMGLSECKLACLMNCSCTAYAYLQLDGCSLWYGDLMNLQDGYDVHGAGTLCLRLAASEVESGRNSGSGHKMLWMACVIPPVVVLSFCSLSFVLWRRRSQNKGKENLHAHHSLMTLDTDSAVKLWESEEAGSQFVLFSFSQIANSTNNFSAQNKLGEGGFGPVYKGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHVNLVRLLGCCIQGEEKILIYEYMPNKSLDFFLFEKSRSVVLDWRKRIHIIEGIAHGLLYLHKHSRLRIIHRDLKASNILLDIDMNPKISDFGLARIFGSKETQANTNRVVGTYGYMAPEYAMQGIFSVKSDVFSFGVLLLEIVSGMRNAGSHRRGRSLNLLGHAWELWREGRWFDLVDPSTRDAYPEHRVLRCVHVGLMCVQENAVDRPTMSDVISMLTSESITLPDPRQPAFLSIVLPAEMDAHDGSFSQNAMTITDLEGR |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [UniProtKB/Swiss-Prot:O81906] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g57480 | LOC_Os01g57480.1 | Chr01 | 33210230 | 33216333 | + | MSU_osa1r7 | ||
| CDS seq | ATGATGTGGAAAAGGAGCTCTTGCAGGGAAGTTATTACTTTGCTGATTATGTCTTTGTGGTTAGAAAGATGTTTAGGAACAGACAGCATCTCTGCAAATGAAACACTTCCAGATGGGCAGACCATAGTGTCCATGAAAAATGTGTTTGTACTTGGTTTCTTTAGCCCTGGAGCTTCAAGTCATCGATATGTTGGTATATGGTACAGCAACCCAGTAAATAGAACAATCGTATGGGTTGCTAACAGGAACGAACCACTATTAGATGCTTCAGGAGTCCTTATGTTTGATGTTAATGGAAACCTGGTCATTGCGCATGGAGGCAGATCACTCATAGTGGCTTATGGACAAGGAACCAAAGACATGAAAGCCACAATCCTGGATTCTGGTAATCTTGCCCTGAGCAGCATGGCTAACCCATCAAGGTATATATGGCAGAGTTTTGATTCTCCTACTGATACATGGCTCCCTGAAATGAAGATTGGACTCAGGACAACAAACCAAACACTCATTTCATGGTCGAGCATTGATGACCCAGCAATGGGGGATTACAAACTTGGAATGGATCCTGCTGGGCTGTCACATCCTGCTGGGCTGTCACAATTCATTGTCTGGTGGAGAGGGAATAATTTTTGGACCAGTGGACACTGGAGTGGTGACATGTTTTCTCTCATCCCAGAACTAAAATTTTTTACCACCATCCCAATTTTCTTCAAATGTAACAATTCTACCAATGACATCACTTGCACATACTCTGCTAACCCATCCGATAGGATGACAAAGATTGTTTTGAATTCAACTGGATCATTAAGCATCATGCAGTTTGATTCTCTTGAGAAATCATGGATTTTGTTATGGAGACAGCCAAGTACTTGTGAAGTTCATAACCTATGTGGAGCTTTTGGTATATGCAATGACAATGATGCAGTGCCTAAGTGTTATTGTACAAAAGGATTTGTTCCACAGGACATAATAGCATATACTAATGGGTATACCAGGGAGGGCTGCAACAGGCAGACCAAGCTGCAATGTAGCAGTGACGAGTTCTTTGAGATTCCTAATGTACGGCTTCCTGATAATAGAAAGAAGCTGCCTGTTATGGGTCTTAGTGAGTGCAAACTGGCATGTTTGATGAACTGCTCTTGTACAGCTTATGCTTATTTGCAGTTGGATGGATGCAGCTTGTGGTATGGTGATCTTATGAACTTGCAGGATGGTTATGATGTTCATGGTGCAGGAACTCTATGCCTTCGTCTGGCAGCGTCAGAAGTAGAATCTGGAAGAAACTCAGGCTCGGGTCACAAAATGCTTTGGATGGCGTGTGTGATTCCACCTGTTGTAGTTCTTTCCTTTTGCTCCCTTTCCTTTGTTCTTTGGAGAAGACGGAGTCAAAACAAAGGTAAAGAAAATTTACATGCTCACCACTCCTTGATGACTCTGGATACGGACAGTGCAGTCAAACTTTGGGAGAGTGAAGAAGCAGGTTCTCAGTTTGTGCTGTTTTCCTTCTCCCAAATAGCAAATTCCACCAACAACTTTTCAGCTCAAAACAAGCTTGGTGAGGGGGGGTTTGGTCCTGTGTACAAGGGAAACTTACCTGATAGGCAGGATATTGCTGTCAAGAGGCTTGCAACAAATTCGGGACAAGGGTTAGTTGAATTTAAGAATGAGGTCCTGCTGATAGCAAAACTTCAACACGTAAATTTGGTTAGGCTTTTAGGCTGCTGCATCCAAGGGGAAGAAAAGATACTTATCTACGAGTACATGCCAAATAAAAGCTTGGATTTCTTCCTCTTTGAAAAATCAAGAAGTGTGGTATTGGACTGGAGAAAGCGAATACATATAATTGAAGGAATTGCTCATGGTCTTCTTTATCTTCACAAACATTCTAGACTGAGAATTATTCATAGGGACTTGAAAGCAAGCAACATTCTGTTAGACATTGATATGAACCCTAAGATCTCTGATTTTGGCTTGGCGAGAATATTTGGCTCTAAAGAAACTCAAGCTAATACAAACAGGGTTGTTGGGACATATGGTTACATGGCTCCTGAGTATGCCATGCAAGGCATTTTCTCGGTTAAGTCTGATGTGTTTAGCTTTGGGGTGTTGCTTTTGGAGATCGTCAGCGGAATGAGAAATGCAGGATCCCACCGACGTGGGCGCTCTCTTAACCTCCTTGGTCATGCCTGGGAGTTATGGAGGGAAGGCAGATGGTTTGATCTCGTTGATCCATCAACACGTGATGCATATCCTGAGCATAGGGTACTGAGATGTGTTCATGTTGGCCTGATGTGCGTCCAAGAGAACGCTGTTGATCGTCCCACTATGAGCGATGTCATCTCAATGCTTACTAGCGAAAGCATCACCTTACCTGATCCTAGGCAGCCTGCTTTCCTCTCCATTGTGCTTCCAGCCGAAATGGATGCCCATGATGGATCCTTTTCTCAAAATGCAATGACAATTACTGATCTGGAGGGTAGATAA
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| Protein seq | MMWKRSSCREVITLLIMSLWLERCLGTDSISANETLPDGQTIVSMKNVFVLGFFSPGASSHRYVGIWYSNPVNRTIVWVANRNEPLLDASGVLMFDVNGNLVIAHGGRSLIVAYGQGTKDMKATILDSGNLALSSMANPSRYIWQSFDSPTDTWLPEMKIGLRTTNQTLISWSSIDDPAMGDYKLGMDPAGLSHPAGLSQFIVWWRGNNFWTSGHWSGDMFSLIPELKFFTTIPIFFKCNNSTNDITCTYSANPSDRMTKIVLNSTGSLSIMQFDSLEKSWILLWRQPSTCEVHNLCGAFGICNDNDAVPKCYCTKGFVPQDIIAYTNGYTREGCNRQTKLQCSSDEFFEIPNVRLPDNRKKLPVMGLSECKLACLMNCSCTAYAYLQLDGCSLWYGDLMNLQDGYDVHGAGTLCLRLAASEVESGRNSGSGHKMLWMACVIPPVVVLSFCSLSFVLWRRRSQNKGKENLHAHHSLMTLDTDSAVKLWESEEAGSQFVLFSFSQIANSTNNFSAQNKLGEGGFGPVYKGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHVNLVRLLGCCIQGEEKILIYEYMPNKSLDFFLFEKSRSVVLDWRKRIHIIEGIAHGLLYLHKHSRLRIIHRDLKASNILLDIDMNPKISDFGLARIFGSKETQANTNRVVGTYGYMAPEYAMQGIFSVKSDVFSFGVLLLEIVSGMRNAGSHRRGRSLNLLGHAWELWREGRWFDLVDPSTRDAYPEHRVLRCVHVGLMCVQENAVDRPTMSDVISMLTSESITLPDPRQPAFLSIVLPAEMDAHDGSFSQNAMTITDLEGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.554730 | 0.800470 | 0.206777 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0783800 | RBH | 0.763628 | 1.197047 | 0.807929 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g42210 | SBH | 0.174927 | 0.061167 | 0.360851 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0783800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0036050 | SBH | 0.308932 | 6.067736 | 2.141576 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0035580 | SBH | 0.283640 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0035950 | SBH | 1.974087 | 0.0 | 0.729463 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0035320 | RBH | 0.118602 | 0.022476 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0035050 | RBH | 2.608514 | 3.096318 | 6.456332 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0548900 | RBH | 1.346978 | 4.691564 | 2.957533 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0034810 | RBH | 0.0 | 0.070117 | 0.207191 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0544700 | RBH | 1.913439 | 9.951241 | 15.4374875 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0034920 | RBH | 0.000000 | 0.040462 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0034990 | RBH | 0.060739 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0035220 | RBH | 0.000000 | 8.410577 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0035300 | RBH | 0.153451 | 0.122858 | 0.246130 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0035120 | RBH | 0.215762 | 1.476701 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G035600 | RBH | 0.609253 | 0.000000 | 0.512910 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0035260 | RBH | 0.214850 | 3.109205 | 1.352426 |
