Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os01g14570 OGI:01025660 | 2/16 Nipponbare | IRGSP 1.0 | MSU Chr01:8163863-8167012
Gene Symbol -
DNA seq

TCACCGACAGTAGCCCCCGGCGTTATGCCAGAGCAATTTCCCTTCCCAAGGGAAGCGGTCAGGTGTGACGCCACTCCTAAAGCCTGGTGACAGGTGGGACCGGTCTGCATAGTTGGGCAAAATCCCCAACGGTCCCAGTCCATACATATTGGTATTGGTAACTTTGGTTGTCCATAATGGGCGGTCTATTCAAGACTGCCACATTACCTGAGCAGCGCACGAATCTGGGCGAGCCGATTTGCTTCGCCTGGAGATATGGTGATGGTGCTTTTCTCGGAGCCATCAGAATAGCGTATAGCATCTTCTGGGCCCGAGGGTATCGGGTTTTGGCGTCCCGGAGGGCCTCACTAACAAAGTAGACGGGCCGCTGCACCTTTCGGCGGGGCCGATCCTCTTCGCTAGGGGCCGCATCTCCAGGGCGCTCTTCATCCGAGAGGCAGCGCGGGGCGCCCTCGGCTTCTGCGCCGATATCCTCGGGGTAAGAGGGCGACAGGCGCGGCCTTCCCGCAGTGGCCCCGAGGCTATCCTGAGGGTCGGGGGCGCCTGACACCGTCGGACAAGCAGGCGGAGGGCCAACTCCGGCCGTCGGGGGCCTTGGGCCGCCGTTCGGCTTGGGGGCCTCTCGGACCCTGACTTCTCCCCGTGGGCGGCGCTGGAAGAGTTCCCTTTCGGAACCGAGGACGGCGCACGCGCGCAGGTCCGGGACGCCGCCGACCACATCGTCCACAGCTTCGAGGGTACGGCCCCTCGGCTCGCGTTCGCCCTCGACTCCGACGAGGAGGGCGGCGACGGTGGTGCGGACGACAGCGACGACAAGGCTGGTGACCCGGGCGCGTCGGAGTGAGCCCCCAGGCCCCCGCCAATCTTGAATAGCTTTTTCTTTCTTCTTCCGAGGCCTTCGGGCCCCCTTCTTGTATAGACTAATTTAATCTGCAACCAAATAAAGAGGAAATTTCTATGTCAATTCTATTTGTGGTGTGTATGAGACGAGGATGGTCTGTGCCGCGGTCCTTCTGTGTCTTGGCTTGATCAAGGGCTCGTGCCCAGGTCCTAGTCCTCAAATGGCTCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCGAGACTGGCCAGGCCGGGAGCGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGTTTTTGCCGATTCCCCCCCGGAGTTCACCACGCCCCGGGGCACGGCTCGGTTCTGGGCCCCGTTTGGCGATTTTAGCTGACCGAACCGAGCCCCCGAGGGCAAGGTTGAGTACGAGTGACCTTATTTCAAGTCAAGATTCTTCAAAAGGAAAAAACGGCACAGACACAGTCCTTTGGAAATCGAAAATGCTTTTATTGAAATACGGAAGAGAAAAGAGATAAGCCCCCGGCCAACCCTGCACGCCCGGGGGGGTGCGGGGTTGGCCCGAGCCCAAGACCTGACACCCGACCCCCACTAGGGGTAGAAGCGACGAAGGTGTTCGATGTTCCATGGGTTAGGCAGCTCTGTGCCGTCGCCCGTGGCCAGCCGAACGGAGCCCGGCCGGGGGACGCCAATCACTCGATACGGACCCTCCCACATTGGTGAGAGCTTGCTCAATCCAGCACGCGTTTGGACGCGGCGTAGGACGAGGTCGTCGACGCAGAGTGATCGGGCCCGGACGTGGCGCTGATGGTAGCGCCGCAGGCTCTGCTGGTAGCGCGCGGCTCGAAGGGCCGCGCGCCGCCTTCGCTCTTCCAAGTAGCCGAGGTCAGGGAGCGTCGGCCTCTTTCTTTTTGTCGCTCGCAGGCCTCCCCTTTCGGGTGGCCCGCGGAGCGCCCTCGACGGCGAGGACATGACCCTCGTCGCCGGAATGGACCGACCTCTTCTTCCTCCTCCTGTCACGCCGCCCTGTCTGAGCGGCGGATCCGGGGGCGGCCGAAGCTGCCACTCCGGAACCGGAGGAGTTCCATGTCCACGCTTCCTCCTTACGAGCCACTCGGTCCGCGAGCTGAAAAAGCTCCGCGGTGGTCTGGGGCTCTTTGGAAGCGATCTTTTCGAGCATGCGGTTGTGCCGCACGCCCCCCTGAACGCGTAGATCACCGCGTGTGCAGGGATGCATGGTATAGTATTGCGGACTTGGCAAAACCGCTGAATGTACGAGCGAAGCGACTCATCATCGCCTCGCTGTACTGCATGCAAGTCCGCTTCTTCGCCTGGGCGCGGATATGTGCCTTGGAAGTTCATGGTGAACTGTTGGCACAGATCCTCCCAGGAGTGGACCGACGCGGGTGGCAAGTTCATCAGCCAACCCCGCGCCTGTCCCTTTAGGGCCATGGGAAAGAAATTCGCCATGACCCTGTCGTCACCCCCAGCGGCCTCGATCCCGGTCGTATAGACCTGGAGAAACTCGGTGGGGTTGACGCTCCCATCGTACTTCTCGGTGATGGTGGGCCGGAACCTTGGGGGCCAACGGACATTCCGAAGACTCGCCACAAAGGCTCTACAGCCGACACCACCAGCCGGGGGCACGGAGGGCTGATCCTCACGTCCATGTCGAGGTGACACTCCGGACGAGGAGGCGCCCTCCGTTGCACGGGGAGTACGCCGGTTATTACGCCGGCGCTCGATGTCGAGGCGGGCATCCGGCTCCCCATGCTGATCCTCCCGAGTTGGAGGTGTCGACGAGGGAGTGGCGGCCGAATGACGTGCAGCCGCCGCCGCTCGCCGCGCCCTCCGCCTTGATGACACGGAGCCGGTGGTAGCGGCGCCGGAGGTCTTGGTGGTGGTGGCGGACCGTCCACCAGCACCCAGGCGCTGCTGTGCCGTCATGACCAAGTTGGCCACGTCTTCCAGCCATCGTTGGGCTGGAGACTCCGGGTCATGGACGACAGGCGGGTGTCGTAGGAGCGCGCCAGCAGCCTGAAGCGCACCCTGAGGTGTGCTGCCGTCGCCGTAGACGAGGAGGCGACGCTCCCCATCTCGCCGTTCTCCTGCATCACCTGCGGCTGGTGACGCCGCGGATTTGTCGACCCTCTCAAGCGCCTCCCCCTGCTTAGGGCTTTGGCGCGGAGGAGGTGGAGGAGTACGAGCTCGACGGCGCGGATTCGGCTCCCCGTCGTCGCCGCTCACACTCGGCGAGAGGTCGTGTGTTTTTCCTTGCTCGGCCAT

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CDS seq

ATGGCCGAGCAAGGAAAAACACACGACCTCTCGCCGAGTGTGAGCGGCGACGACGGGGAGCCGAATCCGCGCCGTCGAGCTCGTACTCCTCCACCTCCTCCGCGCCAAAGCCCTAAGCAGGGGGAGGCGCTTGAGAGGGTCGACAAATCCGCGGCGTCACCAGCCGCAGGTGATGCAGGAGAACGGCGAGATGGGGAGCGTCGCCTCCTCGTCTACGGCGACGGCAGCACACCTCAGGGTGCGCTTCAGGCTGCTGGCGCGCTCCTACGACACCCGCCTGTCGTCCATGACCCGGAGTCTCCAGCCCAACGATGGCTGGAAGACGTGGCCAACTTGGTCATGACGGCACAGCAGCGCCTGGGTGCTGGTGGACGGTCCGCCACCACCACCAAGACCTCCGGCGCCGCTACCACCGGCTCCGTGTCATCAAGGCGGAGGGCGCGGCGAGCGGCGGCGGCTGCACGTCATTCGGCCGCCACTCCCTCGTCGACACCTCCAACTCGGGAGGATCAGCATGGGGAGCCGGATGCCCGCCTCGACATCGAGCGCCGGCGTAATAACCGGCGTACTCCCCGTGCAACGGAGGGCGCCTCCTCGTCCGGAGTGTCACCTCGACATGGACGTGAGGATCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCACCGAGAAGTACGATGGGAGCGTCAACCCCACCGAGTTTCTCCAGGTCTATACGACCGGGATCGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTAAAGGGACAGGCGCGGGGTTGGCTGATGAACTTGCCACCCGCGTCGGTCCACTCCTGGGAGGATCTGTGCCAACAGTTCACCATGAACTTCCAAGGCACATATCCGCGCCCAGGCGAAGAAGCGGACTTGCATGCAGTACAGCGAGGCGATGATGAGTCGCTTCGCTCGTACATTCAGCGGTTTTGCCAAGTCCGCAATACTATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTCAGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACCACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACATGGAACTCCTCCGGTTCCGGAGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCGGTCCATTCCGGCGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTCCGCGGGCCACCCGAAAGGGGAGGCCTGCGAGCGACAAAAAGAAAGAGGCCGACGCTCCCTGACCTCGGCTACTTGGAAGAGCGAAGGCGGCGCGCGGCCCTTCGAGCCGCGCGCTACCAGCAGAGCCTGCGGCGCTACCATCAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTCGTCCTACGCCGCGTCCAAACGCGTGCTGGATTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATTGGCGTCCCCCGGCCGGGCTCCGTTCGGCTGGCCACGGGCGACGGCACAGAGCTGCCTAACCCATGGAACATCGAACACCTTCGTCGCTTCTACCCCTATCTATACAAGAAGGGGGCCCGAAGGCCTCGGAAGAAGAAAGAAAAAGCTATTCAAGATTGGCGGGGGCCTGGGGGCTCACTCCGACGCGCCCGGGTCACCAGCCTTGTCGTCGCTGTCGTCCGCACCACCGTCGCCGCCCTCCTCGTCGGAGTCGAGGGCGAACGCGAGCCGAGGGGCCGTACCCTCGAAGCTGTGGACGATGTGGTCGGCGGCGTCCCGGACCTGCGCGCGTGCGCCGTCCTCGGTTCCGAAAGGGAACTCTTCCAGCGCCGCCCACGGGGAGAAGTCAGGGTCCGAGAGGCCCCCAAGCCGAACGGCGGCCCAAGGCCCCCGACGGCCGGAGTTGGCCCTCCGCCTGCTTGTCCGACGGTGTCAGGCGCCCCCGACCCTCAGGATAGCCTCGGGGCCACTGCGGGAAGGCCGCGCCTGTCGCCCTCTTACCCCGAGGATATCGGCGCAGAAGCCGAGGGCGCCCCGCGCTGCCTCTCGGATGAAGAGCGCCCTGGAGATGCGGCCCCTAGCGAAGAGGATCGGCCCCGCCGAAAGGTGCAGCGGCCCGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAAACCCGATACCCTCGGGCCCAGAAGATGCTATACGCTATTCTGATGGCTCCGAGAAAAGCACCATCACCATATCTCCAGGCGAAGCAAATCGGCTCGCCCAGATTCGTGCGCTGCTCAGACCGGTCCCACCTGTCACCAGGCTTTAGGAGTGGCGTCACACCTGACCGCTTCCCTTGGGAAGGGAAATTGCTCTGGCATAACGCCGGGGGCTACTGTCGGTGA

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Protein seq

MAEQGKTHDLSPSVSGDDGEPNPRRRARTPPPPPRQSPKQGEALERVDKSAASPAAGDAGERRDGERRLLVYGDGSTPQGALQAAGALLRHPPVVHDPESPAQRWLEDVANLVMTAQQRLGAGGRSATTTKTSGAATTGSVSSRRRARRAAAAARHSAATPSSTPPTREDQHGEPDARLDIERRRNNRRTPRATEGASSSGVSPRHGREDQPSVPPAGGVGCRAFVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRFCQVRNTIPCIPAHAVIYAFRGACGTTACSKRSLPKSPRPPRSFFSSRTEWLVRRKRGHGTPPVPEWQLRPPPDPPLRQGGVTGGGRRGRSIPATRVMSSPSRALRGPPERGGLRATKRKRPTLPDLGYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFYPYLYKKGARRPRKKKEKAIQDWRGPGGSLRRARVTSLVVAVVRTTVAALLVGVEGEREPRGRTLEAVDDVVGGVPDLRACAVLGSERELFQRRPRGEVRVREAPKPNGGPRPPTAGVGPPPACPTVSGAPDPQDSLGATAGRPRLSPSYPEDIGAEAEGAPRCLSDEERPGDAAPSEEDRPRRKVQRPVYFVSEALRDAKTRYPRAQKMLYAILMAPRKAPSPYLQAKQIGSPRFVRCSDRSHLSPGFRSGVTPDRFPWEGKLLWHNAGGYCR

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os01g14570 LOC_Os01g14570.1 Chr01 8163863 8167012 - MSU_osa1r7
CDS seq

ATGGCCGAGCAAGGAAAAACACACGACCTCTCGCCGAGTGTGAGCGGCGACGACGGGGAGCCGAATCCGCGCCGTCGAGCTCGTACTCCTCCACCTCCTCCGCGCCAAAGCCCTAAGCAGGGGGAGGCGCTTGAGAGGGTCGACAAATCCGCGGCGTCACCAGCCGCAGGTGATGCAGGAGAACGGCGAGATGGGGAGCGTCGCCTCCTCGTCTACGGCGACGGCAGCACACCTCAGGGTGCGCTTCAGGCTGCTGGCGCGCTCCTACGACACCCGCCTGTCGTCCATGACCCGGAGTCTCCAGCCCAACGATGGCTGGAAGACGTGGCCAACTTGGTCATGACGGCACAGCAGCGCCTGGGTGCTGGTGGACGGTCCGCCACCACCACCAAGACCTCCGGCGCCGCTACCACCGGCTCCGTGTCATCAAGGCGGAGGGCGCGGCGAGCGGCGGCGGCTGCACGTCATTCGGCCGCCACTCCCTCGTCGACACCTCCAACTCGGGAGGATCAGCATGGGGAGCCGGATGCCCGCCTCGACATCGAGCGCCGGCGTAATAACCGGCGTACTCCCCGTGCAACGGAGGGCGCCTCCTCGTCCGGAGTGTCACCTCGACATGGACGTGAGGATCAGCCCTCCGTGCCCCCGGCTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCACCGAGAAGTACGATGGGAGCGTCAACCCCACCGAGTTTCTCCAGGTCTATACGACCGGGATCGAGGCCGCTGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTAAAGGGACAGGCGCGGGGTTGGCTGATGAACTTGCCACCCGCGTCGGTCCACTCCTGGGAGGATCTGTGCCAACAGTTCACCATGAACTTCCAAGGCACATATCCGCGCCCAGGCGAAGAAGCGGACTTGCATGCAGTACAGCGAGGCGATGATGAGTCGCTTCGCTCGTACATTCAGCGGTTTTGCCAAGTCCGCAATACTATACCATGCATCCCTGCACACGCGGTGATCTACGCGTTCAGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCTTCCAAAGAGCCCCAGACCACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGTAAGGAGGAAGCGTGGACATGGAACTCCTCCGGTTCCGGAGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCGGTCCATTCCGGCGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTCCGCGGGCCACCCGAAAGGGGAGGCCTGCGAGCGACAAAAAGAAAGAGGCCGACGCTCCCTGACCTCGGCTACTTGGAAGAGCGAAGGCGGCGCGCGGCCCTTCGAGCCGCGCGCTACCAGCAGAGCCTGCGGCGCTACCATCAGCGCCACGTCCGGGCCCGATCACTCTGCGTCGACGACCTCGTCCTACGCCGCGTCCAAACGCGTGCTGGATTGAGCAAGCTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATTGGCGTCCCCCGGCCGGGCTCCGTTCGGCTGGCCACGGGCGACGGCACAGAGCTGCCTAACCCATGGAACATCGAACACCTTCGTCGCTTCTACCCCTATCTATACAAGAAGGGGGCCCGAAGGCCTCGGAAGAAGAAAGAAAAAGCTATTCAAGATTGGCGGGGGCCTGGGGGCTCACTCCGACGCGCCCGGGTCACCAGCCTTGTCGTCGCTGTCGTCCGCACCACCGTCGCCGCCCTCCTCGTCGGAGTCGAGGGCGAACGCGAGCCGAGGGGCCGTACCCTCGAAGCTGTGGACGATGTGGTCGGCGGCGTCCCGGACCTGCGCGCGTGCGCCGTCCTCGGTTCCGAAAGGGAACTCTTCCAGCGCCGCCCACGGGGAGAAGTCAGGGTCCGAGAGGCCCCCAAGCCGAACGGCGGCCCAAGGCCCCCGACGGCCGGAGTTGGCCCTCCGCCTGCTTGTCCGACGGTGTCAGGCGCCCCCGACCCTCAGGATAGCCTCGGGGCCACTGCGGGAAGGCCGCGCCTGTCGCCCTCTTACCCCGAGGATATCGGCGCAGAAGCCGAGGGCGCCCCGCGCTGCCTCTCGGATGAAGAGCGCCCTGGAGATGCGGCCCCTAGCGAAGAGGATCGGCCCCGCCGAAAGGTGCAGCGGCCCGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAAACCCGATACCCTCGGGCCCAGAAGATGCTATACGCTATTCTGATGGCTCCGAGAAAAGCACCATCACCATATCTCCAGGCGAAGCAAATCGGCTCGCCCAGATTCGTGCGCTGCTCAGACCGGTCCCACCTGTCACCAGGCTTTAGGAGTGGCGTCACACCTGACCGCTTCCCTTGGGAAGGGAAATTGCTCTGGCATAACGCCGGGGGCTACTGTCGGTGA

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Protein seq

MAEQGKTHDLSPSVSGDDGEPNPRRRARTPPPPPRQSPKQGEALERVDKSAASPAAGDAGERRDGERRLLVYGDGSTPQGALQAAGALLRHPPVVHDPESPAQRWLEDVANLVMTAQQRLGAGGRSATTTKTSGAATTGSVSSRRRARRAAAAARHSAATPSSTPPTREDQHGEPDARLDIERRRNNRRTPRATEGASSSGVSPRHGREDQPSVPPAGGVGCRAFVASLRNVRWPPRFRPTITEKYDGSVNPTEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRGDDESLRSYIQRFCQVRNTIPCIPAHAVIYAFRGACGTTACSKRSLPKSPRPPRSFFSSRTEWLVRRKRGHGTPPVPEWQLRPPPDPPLRQGGVTGGGRRGRSIPATRVMSSPSRALRGPPERGGLRATKRKRPTLPDLGYLEERRRRAALRAARYQQSLRRYHQRHVRARSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFYPYLYKKGARRPRKKKEKAIQDWRGPGGSLRRARVTSLVVAVVRTTVAALLVGVEGEREPRGRTLEAVDDVVGGVPDLRACAVLGSERELFQRRPRGEVRVREAPKPNGGPRPPTAGVGPPPACPTVSGAPDPQDSLGATAGRPRLSPSYPEDIGAEAEGAPRCLSDEERPGDAAPSEEDRPRRKVQRPVYFVSEALRDAKTRYPRAQKMLYAILMAPRKAPSPYLQAKQIGSPRFVRCSDRSHLSPGFRSGVTPDRFPWEGKLLWHNAGGYCR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g07510 SBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0008501 SBH 0.367119 3.838377 2.068388
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0134800 RBH 0.004478 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0034900 SBH 0 0.045797 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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Huazhong Agricultural University

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