Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g12040 | OGI:01003660 | 3/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:6546714-6554267 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAATCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGATAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCAAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACTAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGACAGCAATTGGGTGTGATGGGAACAGCCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAAAGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAATGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGAAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCCTAAGGAGAAGTGGTCTCTATTGTTCGACACCGATGGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTATACAACTGGGTAATGTGAGGAGTTCGGGTACTTCCATTGGTTGCTATTGTTGAATTCATCCTTCACGGCACGCAAGCGTACTTTAGGGATCGATACAAGAAAATTGGTCCGTCCATGGCCGATAACAACATAGTGTTTGGCAACGTAGTGACAAAGTACATGGAAGATAAAATCAAAAAGGCACGGAGACATAGAGTTGTTGCTCAAGGCACACAAGTGCATCGGTATGAAATAATGTGTGTTGATAGGAGCAGGCGTGGTATCTATCGCAAGCAAGCCGTGCAGGAATGTGTCTTGAAGGCGGATGGTGGATGTACCTGCAGTTGTATGAAGCCGAAGCTTCATCACCTTCCTTGCTCACACGTTCTTGCTGCTGCCGGTGATTGTGGCATATCTCCCAATGTGTACGTCTCAAATTATTTCAGGAAAGAAGCAATCTTTCATACATGGAGTGAGGAGATATATGGGTTCGGGATCTCAGGATCTTACACAATGCTGAGTGCCCAAGTTTTTTATGTTCCAGATCCATCTAAGTTAAGGGTGAAAAAGGGTCGACGCCAAACTAGACGCATCAGAAATGATATGGATGAGTCAGAAGTAGGTGGGAGGACTTTACGCTGTAGCAAGTGTGATCTGCGCGGCCATACTTACAAGAAATGTCCGAAGAATGCAGAAGTTCCAAGCGGCGCAGATGCTAGTCCATCTGGACATTCAAGTGATGGTAGGCGACCACCTGGTGAAGGAACAACAAGCAGGCGCGCACGGCCAAGGCGTCGTCGCGCAGCAGGCGATTCCATGGTGTAACAATGCTATCGATTTAGGAAATAAAATGCTGTTGTGATGTGATGAGTGTTCGGACTAAATACTTCTATCGTGTAATTTCAATTGAATGTTGTTGTAATGAGTACCTCCGACTATTGTTGTACTAGTAGTATTGCGAACTATTCGGTGTTGTATCATAATGTTATCGTGATGAGTGTTCGGACTAAGTACTCATATCGTGTAACTGCAGTTGTTGTTGTAATCAGAAATATTCCGTATGGTTACACTTTTGTTTGTTTGTACTCTTGTTTAATATGTGTTAGTAATTCGCTTATGAACATTTATTACTTATGTTGAACTAATTATTTATATGTTTCTGATCAATCTATTTGATGCAGGTATGGCGTACGACACACCGGCGCTGTTGAACCGTGAGATTGACAGGAACCACCGCTCGTTCCTGTCAGCAGTCGAGGGTGCACAGCTCGGCACCTTCCGTCCACGCACGTCGCGCGAGTGGTTGCGTGTCGACCCCCGTCACGTTCCTTGGTACGCGTATGTTCACATTTCAACTCAACTTTGCTTTGTGTTGTACTTATGTTTGAAGTTTGCTCTATACAGGTTGCGTGAGGCAGGCCTTCTACCACTTTGTAGGCTTGTTGAGGCGGCGGCGGACGACCGTGACCCAGCGAAGCGGTGGGATGCAGACCGGTCACTCCTTGCCGCTCTGGTAGACCGCTGGAGACCTGAGACGCACACGTTCCACCTTCCCTGTGGGGAGATGGCTCCGACACTGCAGGACGTGTCGTACCTGCTCGGGCTACCGCTGGCGGGAGCACCAGTTGGTCCTGTGGACGGTGTTTTTGGGTGGAATGAGGATATCACTGCGCGCTTCGAGCAGGTGATGCGCCTTCCACACCTAGGACCGGCCAACACCCTTCCTCCGTACTCTACAGTCGGGCCTAGCAAGGCTTGGTTGCTCCAGTTCACTGTAAGTAAATAAGTTGTTATTATCATACATGCTTATTTGCGATCAATAGAGTGTTTTGTACTAACATTTCATTCTTAATTGTAGGCGGACCTTCTACACCCTGACGCTGATGATTACTCGGTCCGACGCTCCCTTGAGGCGTACCTGTTGTGGTTGTTCGGGTGGGTGATGTTCACTAGCACCCACGGGCACGCTGTGGACTTCCGGCTGGTCTACTACGCACGGTCCATCGCGGATGCTCAGCCACAGGACGTGCCGCAGTGGAGCTGGGGTTCTGCCGTGCTAGCAGCCACGTACCGTGCCCTCTGTGAGGCGTGCACGAAGACTGACGCGGGAGCGATCATCGCTGGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGTGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGGTTAGTGCAACTTCGCTGCGTTATAAGTTTATCAGTCGTCTTCTTTTTTTTCTTCACATAACATGTCTAATTCCGATCATGTTTATTGCAGTGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCCTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTGAGTTCGGATTGTTCATTTCTAAATTTTTATGATAATTACTTCATCGAGCCATATAATTTACCTCTCTTCACAGGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGTACGTCGAATTTGTATTAGTTCTTACAATTATTTCATTTATCTTGCATAATATAGGACAACTACTGAATTTTTTATTTCCATCTTGCATAGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTGTTTCGCACGGTACTGCTCAGCCCAGAGGTTTCTTAAGTTTTGTTTATGTTTTTGTACGAAAACATCACCCCGTCGTAACTTGATGTTCCATCCTCGCAGGACCTCATTTGCCTTCGAGCGCCCCTAGCTTCGGAGCAGTGCGACCTACAGCACCGGTTTCGCACGGTACAGTTCAGCCCAGAGATTAGTTCATTTTTGTTTCAGCTTTTGCACGAATATGTCACCATGTTTTAACTGCACGTTTCCTCATCGCAGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCGCGAGCTCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGGTACTTTACTTTTTATTAATACTATTAAATACCTGTATGAAACTGATGGTCCTTGTCCAGCAGGATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCACACCACCACAACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCAGGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGGTAAGAGGCCTCGTCAGTAGTGTTCTACCTCTTCAGTCCTTATGTGACCGTTTTTTTTGGCTTACAAACTTGTAAAGCAATATTACTTTTGCTATTACTACTGCAGTACTACTTGTGTTTGTCTCGTCTACATAGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTTCACGGTAGTGTCAGATCCAGTAGCGCGCACAGTCCACAACAGCACACATGAAAAGCGGCAGCTCGAGTTGTCACTATCAACTTTCGGCGCTGCCTGTTGACATAAAGTGAATCACGCCCACGCATGATCGTCTTGTCACATCTAATGAATAATGTATCTCATTGAGTTCACATATATTGCAGTGAAAACAACGCTATATAATTGATAATCTGAAGGCAACCTCTTCATATCTTCTTTCCCACTAGCACACAACACACGAAAATGGAAGCGCCATTCCTTGAGCGTCTCAACTGGCGAAGCGATCCTTTTGCTGGTTGGTTTCCACCATGGTGTGACCGTCCTTTGTGCGATTGTGGGGATGGATGCATACTCAAGTCTTCCCTCATGATACAAACTCGGGGCAGGAGATTCTTCCAATGCGCGAACTTTGATCAGGTATGCTTCATCTATTCGAAGTTCAAATGGATAAAAAAACTAACTTCTTCGTACACAATTGTAACATCTTACGCAGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGTAAATCCCCTAGGACTCCCCACGTGGCGTGAGCGTCCGGAGTGTCGTTGTGGTGACCGTTGTCAGGTCATAAGGTCCGTAAGGCACCGAACTCGAGGACAAAGGTGTTTCGTGTGTCCAAACATTATCGACGATGATTTCGTGATAATTACAACTATTCTTTTCATCACTCCTCAGTACTATCACTAACTTAACTATCCCAAAATGGATGTACATAGGAGGATGTAAGGAAATGTCAATTCGTACAATGGATTGACACAGTCAGAGTTACTTCAAGTGGCGGGCCGATAACGCAACCTGAACCGACCATACAGTTCATTCATGCTTGGATGGAGTACGAACGTTGGGTGGAAATTGCAAGCTTAGACTGGAGGAACAATCCATTAGGGTTACCTAAATGGTCCGAGCGTCCAAAGTGTGGGTGCAGAGATTGCTGGCAGGTGGCTACATCCTTTGCTGAACAAACATTTCGAAGGAGATATTTTGTCTGCCCCAATGTAGACAACGATTTCGTTGTATGTCTAACCATTTACAAAATCCGCTATGATTTGCACAAAATTACTACCCAAACTGAATAACATTACTATTTTTACAGGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGGGCCGATAG
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| CDS seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAATCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGATAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCAAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACTAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGACAGCAATTGGGTGTGATGGGAACAGCCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAAAGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAATGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGAAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCCTAAGGAGAAGTGGTCTCTATTGTTCGACACCGATGGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTATACAACTGGGTAATGAAAGAAGCAATCTTTCATACATGGAGTGAGGAGATATATGGGTTCGGGATCTCAGGATCTTACACAATGCTGAGTGCCCAAGTTTTTTATGTTCCAGATCCATCTAAGTTAAGGGTGAAAAAGGGTCGACGCCAAACTAGACGCATCAGAAATGATATGGATGAGTCAGAAGTAGGTGGGAGGACTTTACGCTGTAGCAAGTGTGATCTGCGCGGCCATACTTACAAGAAATGTCCGAAGAATGCAGAAGTTCCAAGCGGCGCAGATGCTAGTCCATCTGGACATTCAAGTGATGGTATGGCGTACGACACACCGGCGCTGTTGAACCGTGAGATTGACAGGAACCACCGCTCGTTCCTGTCAGCAGTCGAGGGTGCACAGCTCGGCACCTTCCGTCCACGCACGTCGCGCGAGTGGTTGCGTGTCGACCCCCGTCACGTTCCTTGGTTGCGTGAGGCAGGCCTTCTACCACTTTGTAGGCTTGTTGAGGCGGCGGCGGACGACCGTGACCCAGCGAAGCGGTGGGATGCAGACCGGTCACTCCTTGCCGCTCTGGTAGACCGCTGGAGACCTGAGACGCACACGTTCCACCTTCCCTGTGGGGAGATGGCTCCGACACTGCAGGACGTGTCGTACCTGCTCGGGCTACCGCTGGCGGGAGCACCAGTTGGTCCTGTGGACGGTGTTTTTGGGTGGAATGAGGATATCACTGCGCGCTTCGAGCAGGTGATGCGCCTTCCACACCTAGGACCGGCCAACACCCTTCCTCCGTACTCTACAGTCGGGCCTAGCAAGGCTTGGTTGCTCCAGTTCACTGCGGACCTTCTACACCCTGACGCTGATGATTACTCGGTCCGACGCTCCCTTGAGGCGTACCTGTTGTGGTTGTTCGGGTGGGTGATGTTCACTAGCACCCACGGGCACGCTGTGGACTTCCGGCTGGTCTACTACGCACGGTCCATCGCGGATGCTCAGCCACAGGACGTGCCGCAGTGGAGCTGGGGTTCTGCCGTGCTAGCAGCCACGTACCGTGCCCTCTGTGAGGCGTGCACGAAGACTGACGCGGGAGCGATCATCGCTGGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGTGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGTGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCCTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTGTTTCGCACGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCGCGAGCTCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGCAGGATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCACACCACCACAACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCAGGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTTCACGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGGGCCGATAG
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| Protein seq | MSNKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSWLLRGFRIDQEIYTMSVSVVVSRATEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEADDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTKHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFELKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILTAIGCDGNSQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPKVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEKSRRPQVEGDEPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMKEAIFHTWSEEIYGFGISGSYTMLSAQVFYVPDPSKLRVKKGRRQTRRIRNDMDESEVGGRTLRCSKCDLRGHTYKKCPKNAEVPSGADASPSGHSSDGMAYDTPALLNREIDRNHRSFLSAVEGAQLGTFRPRTSREWLRVDPRHVPWLREAGLLPLCRLVEAAADDRDPAKRWDADRSLLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWNEDITARFEQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEAYLLWLFGWVMFTSTHGHAVDFRLVYYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGCRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMVFDIFVEPHCPQRVMRQFGLRQVFPGNVQPTVLPADHSLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVGADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPVSHGPRLPSSAFAGTTGASASSAGAFATSSGAFASSSSHGASIPRPHAGFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGAHHHNVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSQGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRFTTYRPMCNFIEWVDMENPQNDGTRAYPRSETRSDYLRRKDEHERRIAAEALEWHGNPRMGGFTRWIDNVTPSYHGQKITESETQVEYQRLKDHENAMHSDRPRRGR |
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| Function | Serine/threonine-protein phosphatase 7 long form homolog [UniProtKB/Swiss-Prot:Q9LNG5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g12040 | LOC_Os01g12040.1 | Chr01 | 6546714 | 6554267 | + | MSU_osa1r7 | ||
| CDS seq | ATGTCAAATAAGGTCACATTTCAGATAGTTCACGGTGAAGGAAATATTAGATTTGGTCCAGATGGTGTTGATCTGTCAGATTTTGTAATGACATCTAAGGGCATCGATAGGCCTGCGGAGAGAACATTTCAGTCAATTTATAGTTGGTTGTTGAGAGGATTTAGAATAGACCAAGAAATCTACACAATGTCAGTATCAGTTGTAGTGAGTCGTGCAACAGAAGGTTATTTTTGGGAACTAATGCCGATGGATAGCACTGCTGCTTGGAGACGGTATGTGGAAATGGCTTTTGAACGGTCATGGCCCCTCGTTATATTTGTGTCGGTACAAGAGAAAGATATAAATGTTTCAATGCAAACCGAAGATGTAGAGGGTCCTATCAATGCAGGGGATGTTGTTGGACCATCGATGCAAAATGAGGAAAATCAACCAAGGGAGGAGCAGGCCATGGGCATGGCGGATGAGGGGGAGAGAGTCGGTATAATTGTTGATGAAATGGAGAGGGAAGATTCGGATAATGAGGAAGCGGACGACGACGCATCATCCGATGAGGAAGGTGATGTAATGGCCACTGATTGGGCAAATGAGGACTTCTCTGGACTTGTTATATCAGAGGGTGATCATGTACCCTGGGAGTATAAGGAGAACGAGGTAATTGAGGGTGCAAGGTATGCTCATAAGGATGAGATGAAGGAGGCGGTGAAGCATTGGGCAGTTTCCTTGCAGAGAGAGTTTAGGGTGGTCAAGTCAACAAATTATGTGTATGAAGTGAGGTGCATGAAGGAAGATTGTCCGTGGCGTGTCCATGCATATAAGGGTAAATGGAATGATTATTGGAAAGTTAGCATTGTGACCAAGCACAAGTGCTACTTACAAGGGGTGGAGAAGTATCACCGAAACATCACTTCAGCTTTTGTGGCAAGTGAGATGTACAGCAGTGTTGTTGGTAACATTGGCTTTGAACTAAAATCAATTATTAGGCACATCGAGAACAAATTCAAGTACACCATAAGCTATGCAAAGGCCTGGAGAGCCAAACAAAAGATTATTGAGATGAGGTATGGCACATTTGAAGCTTCTTATGATAATTTGCCTCGTTTGTTAGCCACCATTGCCCAGAGGAATAATAATACTTACTATGACCTACATACATTTACATCGGTTGATGATCGAACAAAGAGTGTGCTGCAAAGAGCCTTTTTCTCATTGGGTGCTTGCATCAATGCTTTTGTGCATTGTCGACCTGTTCTATGCATAGATGGAACTTTTATGACAGGTAAATACCGAGGTCAGATATTGACAGCAATTGGGTGTGATGGGAACAGCCAGGTTCTACCTATGGCTTTTGCATTTGTAGAGAGTGAGAACACTGAAAGCTGGTACTGGTTCCTAGAGAGAGTGCACATTGCAGTGGTGCGTATGAGGCCCAAAGTTTGCCTTATACATGATCGTCATGCGGGTATGTTGCGGGCTATTGACTACTTGCAGAATGGTTGGGATGAGAAGGGACTTCCAGCTAAGTGGCCTGATGTTCGGAGTCGGTGGTGCATGCGTCACATGGGTGCAAATTTCTACAAGCAATTCAAGAACAAGCATCTTATGGAGCTCTTTAAGAGGCTCTGTGCACAGAACCAAGAGAAGAAATTTAATGAGTTGTGGGACAAGTTGGATGAGTTGACAACGAAGCAAACAGATGAGAAATCTCGCAGACCACAAGTTGAAGGTGACGAGCCTCCCATACCTCTTGGTGCATTACATGATGACCCACCAACAATGAGAAGGAGGTCAGGGTCGTCCATCAGAAATTTCACTCAGTGGATTGAGAATGAGCCTAAGGAGAAGTGGTCTCTATTGTTCGACACCGATGGATCTCGGTATGGCATAATGACAACCAATTTGGCAGAGGTATACAACTGGGTAATGAAAGAAGCAATCTTTCATACATGGAGTGAGGAGATATATGGGTTCGGGATCTCAGGATCTTACACAATGCTGAGTGCCCAAGTTTTTTATGTTCCAGATCCATCTAAGTTAAGGGTGAAAAAGGGTCGACGCCAAACTAGACGCATCAGAAATGATATGGATGAGTCAGAAGTAGGTGGGAGGACTTTACGCTGTAGCAAGTGTGATCTGCGCGGCCATACTTACAAGAAATGTCCGAAGAATGCAGAAGTTCCAAGCGGCGCAGATGCTAGTCCATCTGGACATTCAAGTGATGGTATGGCGTACGACACACCGGCGCTGTTGAACCGTGAGATTGACAGGAACCACCGCTCGTTCCTGTCAGCAGTCGAGGGTGCACAGCTCGGCACCTTCCGTCCACGCACGTCGCGCGAGTGGTTGCGTGTCGACCCCCGTCACGTTCCTTGGTTGCGTGAGGCAGGCCTTCTACCACTTTGTAGGCTTGTTGAGGCGGCGGCGGACGACCGTGACCCAGCGAAGCGGTGGGATGCAGACCGGTCACTCCTTGCCGCTCTGGTAGACCGCTGGAGACCTGAGACGCACACGTTCCACCTTCCCTGTGGGGAGATGGCTCCGACACTGCAGGACGTGTCGTACCTGCTCGGGCTACCGCTGGCGGGAGCACCAGTTGGTCCTGTGGACGGTGTTTTTGGGTGGAATGAGGATATCACTGCGCGCTTCGAGCAGGTGATGCGCCTTCCACACCTAGGACCGGCCAACACCCTTCCTCCGTACTCTACAGTCGGGCCTAGCAAGGCTTGGTTGCTCCAGTTCACTGCGGACCTTCTACACCCTGACGCTGATGATTACTCGGTCCGACGCTCCCTTGAGGCGTACCTGTTGTGGTTGTTCGGGTGGGTGATGTTCACTAGCACCCACGGGCACGCTGTGGACTTCCGGCTGGTCTACTACGCACGGTCCATCGCGGATGCTCAGCCACAGGACGTGCCGCAGTGGAGCTGGGGTTCTGCCGTGCTAGCAGCCACGTACCGTGCCCTCTGTGAGGCGTGCACGAAGACTGACGCGGGAGCGATCATCGCTGGCTGCCCTATGTTGCTTCAGCTTTGGGCAGCCGAGAGGTTTGCCATAGGTCGACCAGTGGTGGACAGCGCACCCTACGGGGTTGGTCGCAGTGCGCAGTGGCCAGAGGACGGTCCCACGATGGGGACTTACTGGTGTCGACGTGGGTGTCGTTACGCTCACGTCCAGGTGAGACGAGGTTACCCGGACTTCGTGTTCGAGTTTGACCGTCTCCAGCCGAGCGACGTCATCTGGGAGCCGTACACAGAAGAGGCCGTCGCTGCGAGAGCACCGCTAGGACTTTCGTCCTTGTGCACACGCGACCAGGCTTACTGGCTCACCATCCTGCCGATGGTGTTCGACATTTTCGTTGAGCCTCACTGCCCGCAGCGTGTGATGAGACAGTTCGGACTTAGGCAGGTGTTTCCGGGCAACGTGCAGCCGACCGTCCTCCCTGCCGACCACTCGTTGACTCGACGGGGACAGCTAGCAGGCGCACTTTGGGCTCCACGTGTACAGCAGTACGTTGACGACTGGGTGTTAGCTACAGAGGAGGTGATCAACGAGCTCTTCCCACACACGGAGGAGAACTACCGTGACTACCTTCGCTGGTACCTTCCTCGCACTCGTGCGCGTGTGACCTTCACTCCAGACGCCCCAGAGCCGCACGTTGCCGCTGTCACGGACGCGTATCCCACGCACCGTGACCGAGACTACTTCGTGGGGGCTGATGCCGCACGGGATATCAGTGCCGATATCACCGCAGTCCAAGTGAGGTTGAACAGAGGTTTGCACTTGACTGACGTTGAGCAGAGGGTGACCTTCGACCGGATGCAGGAGAAGATGCGTGCGGTCATGCGCGTCTTCTCCTGTCGCAGCGCCGTGGACGTCGTACCTCCAGCTGGTCCGGTACAACCACGGCCTCGCGCGCCTACCGTCGGAGCAGGACCTCGACCTACGGCACCTGTTTCGCACGGACCTCGTCTGCCTTCGAGCGCGTTCGCAGGCACGACCGGCGCTTCCGCGAGCTCCGCAGGGGCGTTCGCCACCTCTTCGGGCGCGTTCGCCAGCTCTTCCTCTCACGGAGCGTCGATCCCTCGCCCACACGCAGGATTTGCAGCCGGGATCTTCGGTACTGGGGCCTCTTCGTCTCACGCCGGTAGGACTGGTCCTACTAGCCAGTTCTACGACGACGACTTGCACGGTGCACACCACCACAACGTACTAGGCTCCTCTCAGCTTGGAGGAGCTCCAGAGGCGCACACTCAGGAGCAGCCAGAGGTCACACCTGTACAGGCAGGACGGGTTGGCCGTGCCGTACCCCCGGACCGACTCACGTACTCCCAGGGGCACATTAGGGCGCAGGGTAGGAGGGACAGGGTTCTTTTCATTCATATGGTGCTAGAACAACTTATGCTCACGACAACACACTTTCGGCGCTTCACGACATATCGTCCAATGTGCAACTTCATCGAGTGGGTAGACATGGAGAACCCACAAAACGACGGAACCCGTGCTTACCCACGTAGTGAAACAAGATCGGACTACCTAAGGCGGAAGGATGAGCATGAACGTCGAATTGCTGCTGAGGCTTTAGAATGGCACGGCAATCCAAGGATGGGTGGATTTACTCGATGGATCGACAATGTCACTCCATCATATCATGGCCAGAAGATAACAGAGTCAGAAACACAAGTAGAGTATCAACGATTGAAGGACCACGAGAATGCAATGCATTCTGACCGACCTAGAAGGGGCCGATAG
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| Protein seq | MSNKVTFQIVHGEGNIRFGPDGVDLSDFVMTSKGIDRPAERTFQSIYSWLLRGFRIDQEIYTMSVSVVVSRATEGYFWELMPMDSTAAWRRYVEMAFERSWPLVIFVSVQEKDINVSMQTEDVEGPINAGDVVGPSMQNEENQPREEQAMGMADEGERVGIIVDEMEREDSDNEEADDDASSDEEGDVMATDWANEDFSGLVISEGDHVPWEYKENEVIEGARYAHKDEMKEAVKHWAVSLQREFRVVKSTNYVYEVRCMKEDCPWRVHAYKGKWNDYWKVSIVTKHKCYLQGVEKYHRNITSAFVASEMYSSVVGNIGFELKSIIRHIENKFKYTISYAKAWRAKQKIIEMRYGTFEASYDNLPRLLATIAQRNNNTYYDLHTFTSVDDRTKSVLQRAFFSLGACINAFVHCRPVLCIDGTFMTGKYRGQILTAIGCDGNSQVLPMAFAFVESENTESWYWFLERVHIAVVRMRPKVCLIHDRHAGMLRAIDYLQNGWDEKGLPAKWPDVRSRWCMRHMGANFYKQFKNKHLMELFKRLCAQNQEKKFNELWDKLDELTTKQTDEKSRRPQVEGDEPPIPLGALHDDPPTMRRRSGSSIRNFTQWIENEPKEKWSLLFDTDGSRYGIMTTNLAEVYNWVMKEAIFHTWSEEIYGFGISGSYTMLSAQVFYVPDPSKLRVKKGRRQTRRIRNDMDESEVGGRTLRCSKCDLRGHTYKKCPKNAEVPSGADASPSGHSSDGMAYDTPALLNREIDRNHRSFLSAVEGAQLGTFRPRTSREWLRVDPRHVPWLREAGLLPLCRLVEAAADDRDPAKRWDADRSLLAALVDRWRPETHTFHLPCGEMAPTLQDVSYLLGLPLAGAPVGPVDGVFGWNEDITARFEQVMRLPHLGPANTLPPYSTVGPSKAWLLQFTADLLHPDADDYSVRRSLEAYLLWLFGWVMFTSTHGHAVDFRLVYYARSIADAQPQDVPQWSWGSAVLAATYRALCEACTKTDAGAIIAGCPMLLQLWAAERFAIGRPVVDSAPYGVGRSAQWPEDGPTMGTYWCRRGCRYAHVQVRRGYPDFVFEFDRLQPSDVIWEPYTEEAVAARAPLGLSSLCTRDQAYWLTILPMVFDIFVEPHCPQRVMRQFGLRQVFPGNVQPTVLPADHSLTRRGQLAGALWAPRVQQYVDDWVLATEEVINELFPHTEENYRDYLRWYLPRTRARVTFTPDAPEPHVAAVTDAYPTHRDRDYFVGADAARDISADITAVQVRLNRGLHLTDVEQRVTFDRMQEKMRAVMRVFSCRSAVDVVPPAGPVQPRPRAPTVGAGPRPTAPVSHGPRLPSSAFAGTTGASASSAGAFATSSGAFASSSSHGASIPRPHAGFAAGIFGTGASSSHAGRTGPTSQFYDDDLHGAHHHNVLGSSQLGGAPEAHTQEQPEVTPVQAGRVGRAVPPDRLTYSQGHIRAQGRRDRVLFIHMVLEQLMLTTTHFRRFTTYRPMCNFIEWVDMENPQNDGTRAYPRSETRSDYLRRKDEHERRIAAEALEWHGNPRMGGFTRWIDNVTPSYHGQKITESETQVEYQRLKDHENAMHSDRPRRGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g47000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015450 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0015210 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0015460 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0004510 | SBH | 0.079346 | 0.039090 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0004740 | SBH | 0.0 | 1.635761 | 3.696936 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0033400 | RBH | 0 | 0.047864 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0004660 | SBH | 0.0 | 0.0 | 0.163999 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0033300 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0004670 | SBH | 0.0 | 6.169390 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0004730 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0004690 | SBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0004660 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G004730 | SBH | 0.103899 | 1.135893 | 0.641662 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0004620 | SBH | 1.399844 | 7.124602 | 0.552289 |
