Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g10890 | OGI:01018880 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:5809557-5811617 | ||||||||
| Gene Symbol | CIPK05, OsCIPK05, CIPK5, OsCIPK5, OsSTA7, OsSnRK3.2, SnRK3.2 | ||||||||||
| DNA seq | GTCCCAAAGCAACAAATAAAAACTAAAAGAATGCTGTTGTCAATCTCCCTGTTTCTATTGGTGAAAGAACAGGAGATCCATGTAGACAAACTGCTACTATACAAGGAAAACTGGCAAAAATTATCATCAAAGAGCCCTAAGCCTGATGCTCAAGTGAGAATACTCTCAGGCTCAGCACTTTGATGAAAGGGAAAAGGAGAGAGGAAAATGGATTGTTACTGCATCTCTTATGAGGTTGCACTTAAATGGCATGTCTCGAGATTGACTTAGAGGACTGAGTCAGAGTTGATGACTGTGCCAGTGATGGATGCTCTGACTGACCATCCCAGCAGATGTCCCTGAGAGAAGGTCTTAGGCCCTTGTTGCAGAATTTTTCGTACTCCAACGTGTCCCCTGCAGACTTCTTCACCTCAACAACAAAGAAGGATGGTGTCACTTCAAAGATCTCTGCATCGATCGCGAGCTGCCCTTTCCTCCCTTCTTTGGATCCCTGGAGCTTCACCAGTCCATCCTGCTTCTTCACCTTGAAGCTCTCTGTCTCAGCAATCTGCTCTAGCTTTGACACTATTGCTGATGCTGGTTTTTGTGTCATGAACCGTGAGTCTGCCTTCTGCTCTTTGTCGTTCTCAAACAGGCCTGACAGATCAAATCCTTTGGAGAGGGAGATGATGTCAAATGCATTCAAGCTCACTGGCTTCAAAGAGCTTGCTGGTTCTTTTGCCTTGCCTTCATTGTCCTTGTGATCAGCACTGAAAGCAGTATGGACATCCTTGAGGTTGTTTGATTCATTTGGCTGTGATAGCATCACTGCTGGTTTGTACCCCTTCTTGAACCATGGATGCTCAACTAGCTTCTCAACGGTGATCCTAATGTTTGGATTTGGATCAAGCAGCCTGGACAGAAGCCTTCGGACATCAGTAGTGAACCACTGTGGGAACTTGACATCACCTTTGCTTATCTTCCGGTACATCTCCATTAGATTTGAGTCATGGAATGGGAGGTAGCCAGCAAGCAGAACAAAGAGTATGACACCGCAAGACCATATGTCTGCTTTTGCTCCATCATAGCCCCTCTTATTGATTATCTCTGGTGCAACATATGCAGGTGTGCCACACGTCGTGTGGAGCAGCCCGTCCTGCTTCTGACACTCCTTGAAGGCGCTCAGCCCAAAGTCCGACACTTTGAGGTTGCCATTCTCGTCGACGAGGAGGTTCTCTGGCTTGAGGTCTCGGTGGTAGACACCGCGGCTGTGACAGAAGTCCACAGCCCCTATCAACTGCTGGAAGTACTTCCTCGCAGCATCCTCCTTGAGTCGCCCCCTGGCTACCCTGCTGAAGAGCTCACCACCCCGGACATACTCCATTGCAAAGTATATCTTGCTCTTGCTGGCCATGACCTCGTGCAGCTGGACGATGTTGGGGTGGCGAACGAGGCGCATGATGGAGATCTCTCGCTTGATCTGGTCAATCATGCCGACACGCAATACCTTTTCCTTGTCAATGACCTTGATGGCGACGCTCTGGTTGGATGCAAGGTTCCGTGCATGGTACACCTTGGCGAAGGTGCCTTGCCCGAGCATGCGGCCGAGCTCATACCGGTTCATGAGGATGGACGCCTTCTTCTCCATCCTGCTGGATTCTTCAGGGATTCTTCAGTGCAAAAGAAGCAAATGGGGGGATTTGTTTACAAGCGCCTACTCTGCGCCACTTCAGGCCTCCTTCCTCCCTCCCTGATCCATGTAATGGAAGGGTGAGAGGGAGGAGAGGTGAAGGGCGAGAGTGCGCGCTGTGTTTGGGAAAATCCAAGACACGATTGGTGTATTTGGGATCCTCCTAGGAGGAAGGAGAAAAAGAGAGAGAGTTCTATGGTGGCTAGTGCTTCCCTTGTGACATGAGGCTGGGGCTCACTTCTCTGGAGATGGAAGAGGATGCCTAAAAATAGGCCAGGTGTTTGTGTTGAGCGGCTGTAGTTTTGCATGCTATTTGTAGGATCAGTGGTGCGCTCTAAATTCATCCATGTTACACCTTTACATCCTCTATGTAGTTAATACATGTGTCTTTC
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| CDS seq | ATGGAGAAGAAGGCGTCCATCCTCATGAACCGGTATGAGCTCGGCCGCATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCACGGAACCTTGCATCCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAAAAGGTATTGCGTGTCGGCATGATTGACCAGATCAAGCGAGAGATCTCCATCATGCGCCTCGTTCGCCACCCCAACATCGTCCAGCTGCACGAGGTCATGGCCAGCAAGAGCAAGATATACTTTGCAATGGAGTATGTCCGGGGTGGTGAGCTCTTCAGCAGGGTAGCCAGGGGGCGACTCAAGGAGGATGCTGCGAGGAAGTACTTCCAGCAGTTGATAGGGGCTGTGGACTTCTGTCACAGCCGCGGTGTCTACCACCGAGACCTCAAGCCAGAGAACCTCCTCGTCGACGAGAATGGCAACCTCAAAGTGTCGGACTTTGGGCTGAGCGCCTTCAAGGAGTGTCAGAAGCAGGACGGGCTGCTCCACACGACGTGTGGCACACCTGCATATGTTGCACCAGAGATAATCAATAAGAGGGGCTATGATGGAGCAAAAGCAGACATATGGTCTTGCGGTGTCATACTCTTTGTTCTGCTTGCTGGCTACCTCCCATTCCATGACTCAAATCTAATGGAGATGTACCGGAAGATAAGCAAAGGTGATGTCAAGTTCCCACAGTGGTTCACTACTGATGTCCGAAGGCTTCTGTCCAGGCTGCTTGATCCAAATCCAAACATTAGGATCACCGTTGAGAAGCTAGTTGAGCATCCATGGTTCAAGAAGGGGTACAAACCAGCAGTGATGCTATCACAGCCAAATGAATCAAACAACCTCAAGGATGTCCATACTGCTTTCAGTGCTGATCACAAGGACAATGAAGGCAAGGCAAAAGAACCAGCAAGCTCTTTGAAGCCAGTGAGCTTGAATGCATTTGACATCATCTCCCTCTCCAAAGGATTTGATCTGTCAGGCCTGTTTGAGAACGACAAAGAGCAGAAGGCAGACTCACGGTTCATGACACAAAAACCAGCATCAGCAATAGTGTCAAAGCTAGAGCAGATTGCTGAGACAGAGAGCTTCAAGGTGAAGAAGCAGGATGGACTGGTGAAGCTCCAGGGATCCAAAGAAGGGAGGAAAGGGCAGCTCGCGATCGATGCAGAGATCTTTGAAGTGACACCATCCTTCTTTGTTGTTGAGGTGAAGAAGTCTGCAGGGGACACGTTGGAGTACGAAAAATTCTGCAACAAGGGCCTAAGACCTTCTCTCAGGGACATCTGCTGGGATGGTCAGTCAGAGCATCCATCACTGGCACAGTCATCAACTCTGACTCAGTCCTCTAAGTCAATCTCGAGACATGCCATTTAA
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| Protein seq | MEKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENGNLKVSDFGLSAFKECQKQDGLLHTTCGTPAYVAPEIINKRGYDGAKADIWSCGVILFVLLAGYLPFHDSNLMEMYRKISKGDVKFPQWFTTDVRRLLSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDVHTAFSADHKDNEGKAKEPASSLKPVSLNAFDIISLSKGFDLSGLFENDKEQKADSRFMTQKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEHPSLAQSSTLTQSSKSISRHAI |
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| Function | CBL-interacting protein kinase 5 [UniProtKB/Swiss-Prot:Q9LWM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g10890 | LOC_Os01g10890.1 | Chr01 | 5809557 | 5811617 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGAAGAAGGCGTCCATCCTCATGAACCGGTATGAGCTCGGCCGCATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCACGGAACCTTGCATCCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAAAAGGTATTGCGTGTCGGCATGATTGACCAGATCAAGCGAGAGATCTCCATCATGCGCCTCGTTCGCCACCCCAACATCGTCCAGCTGCACGAGGTCATGGCCAGCAAGAGCAAGATATACTTTGCAATGGAGTATGTCCGGGGTGGTGAGCTCTTCAGCAGGGTAGCCAGGGGGCGACTCAAGGAGGATGCTGCGAGGAAGTACTTCCAGCAGTTGATAGGGGCTGTGGACTTCTGTCACAGCCGCGGTGTCTACCACCGAGACCTCAAGCCAGAGAACCTCCTCGTCGACGAGAATGGCAACCTCAAAGTGTCGGACTTTGGGCTGAGCGCCTTCAAGGAGTGTCAGAAGCAGGACGGGCTGCTCCACACGACGTGTGGCACACCTGCATATGTTGCACCAGAGATAATCAATAAGAGGGGCTATGATGGAGCAAAAGCAGACATATGGTCTTGCGGTGTCATACTCTTTGTTCTGCTTGCTGGCTACCTCCCATTCCATGACTCAAATCTAATGGAGATGTACCGGAAGATAAGCAAAGGTGATGTCAAGTTCCCACAGTGGTTCACTACTGATGTCCGAAGGCTTCTGTCCAGGCTGCTTGATCCAAATCCAAACATTAGGATCACCGTTGAGAAGCTAGTTGAGCATCCATGGTTCAAGAAGGGGTACAAACCAGCAGTGATGCTATCACAGCCAAATGAATCAAACAACCTCAAGGATGTCCATACTGCTTTCAGTGCTGATCACAAGGACAATGAAGGCAAGGCAAAAGAACCAGCAAGCTCTTTGAAGCCAGTGAGCTTGAATGCATTTGACATCATCTCCCTCTCCAAAGGATTTGATCTGTCAGGCCTGTTTGAGAACGACAAAGAGCAGAAGGCAGACTCACGGTTCATGACACAAAAACCAGCATCAGCAATAGTGTCAAAGCTAGAGCAGATTGCTGAGACAGAGAGCTTCAAGGTGAAGAAGCAGGATGGACTGGTGAAGCTCCAGGGATCCAAAGAAGGGAGGAAAGGGCAGCTCGCGATCGATGCAGAGATCTTTGAAGTGACACCATCCTTCTTTGTTGTTGAGGTGAAGAAGTCTGCAGGGGACACGTTGGAGTACGAAAAATTCTGCAACAAGGGCCTAAGACCTTCTCTCAGGGACATCTGCTGGGATGGTCAGTCAGAGCATCCATCACTGGCACAGTCATCAACTCTGACTCAGTCCTCTAAGTCAATCTCGAGACATGCCATTTAA
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| Protein seq | MEKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENGNLKVSDFGLSAFKECQKQDGLLHTTCGTPAYVAPEIINKRGYDGAKADIWSCGVILFVLLAGYLPFHDSNLMEMYRKISKGDVKFPQWFTTDVRRLLSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDVHTAFSADHKDNEGKAKEPASSLKPVSLNAFDIISLSKGFDLSGLFENDKEQKADSRFMTQKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEHPSLAQSSTLTQSSKSISRHAI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.681980 | 0.402042 | 5.618138 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0206700 | RBH | 3.060395 | 1.823485 | 23.719912 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g11790 | RBH | 0.0 | 0.0 | 0.896313 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0206700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0007850 | RBH | 3.294463 | 0.0 | 5.231399 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0007490 | RBH | 1.524027 | 0.0 | 11.004588 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0007810 | RBH | 2.967367 | 0.963187 | 21.082737 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007340 | RBH | 0.524063 | 0.085861 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0007490 | RBH | 22.823984 | 4.498172 | 8.322496 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0095600 | RBH | 5.1770305 | 0.649802 | 1.4084335 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007400 | RBH | 0.642474 | 0.271351 | 10.889215 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0095600 | RBH | 37.165666 | 1.093508 | 3.0248905 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007260 | RBH | 0.343132 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0007450 | RBH | 3.399579 | 0.586772 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007450 | RBH | 51.056347 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0007440 | RBH | 1.498210 | 0.0 | 3.119338 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0007370 | RBH | 0.543836 | 3.319509 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G007460 | RBH | 1.322666 | 2.154238 | 5.115108 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007270 | RBH | 1.887179 | 0.0 | 34.814487 |
