Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os01g10700 | OGI:01018590 | 7/16 | Nipponbare | IRGSP 1.0 | MSU | Chr01:5727326-5729756 | ||||||||
| Gene Symbol | RLCK26, OsRLCK26 | ||||||||||
| DNA seq | ATGGCCATGGCTCCTGTAAGCTTCCTCCTCATCTTCTTCCTCACCACCGCTGGTCTCACCCTCCAAACCTGCTGTTTCGACAGCCCAGGACACTCCGCGAACCTGTCCACCATCTGGACCTGCACTTCCCCAACAACCGATGTTCTCGTCGCTAACCCTCTACTCAGCCGGCCCGTACCAGACAATCACAACCTTCATTTTGCTGCAGGCTTCTACAATTACCCCCTGGTTAACACCTACATCTTTGGAGTCTACACTGTTACTGACGCCGGTGAATTTGCAGACATGACCTCTTGGCGCCCAGAACCCGTGGCAGATGTATGGTCGGCCAACAGGGACCAGTTGATCCGGCAGAACTCCACCCTAAGCTTCACGGCTGAGGGGGACCTGGTTCTTCAGCATCCGGATGGCAGCCTTGTCTGGTCTACCAACACTTCCGGCCAGTCTGTTGCAGGAATGACCCTCACAGAGTCCGGCAACCTGGTGCTGTATAATCACAACAACTTACCGGTCTGGCAGTCATTCGACCACCCAACGGATTCCTTGCTCCCTGGACAGAGATTGGTGCAAGGAATGAGATTGAAGCCTAACGCATTGGCAGTAAATCTGATTGCCAGCGACCTGTATTATTTAACTGTTCATTCGGATGGGCTCTATGCATTTGCAGGATCTAGCAACTCCCAGCCCTACTATGAGTTCACAGTGTCAACTGGAAACAAGTCACAGAATCCTCCAGCGTATTTAACTCTGGCGAACAGGAGCTTGGACATATTTGTTCCATCCTCTTCATCTGCAAATCTGGAACACTTGTCCCTTCAATCACCGGCTCTGTCTCTCCAGTACATTAGATTTGAATCTGATGGGCAACTCAGGTTGTATGAATGGCAAGCAGACCAAAATGGTAGATGGCTATATGTGCAGGACGTTTTCCCATTTCAGTACTGTGATTACCCAACTGTCTGCGGGGAGTATGGGATCTGCTTGAATGGACTGTGCTCCTGTCCAACTGCAACTGAAAGTCACATTCGATACTTCAGACCGGTCGATGACAGGAGACCACATCTTGGCTGCACACTGGAGACCCCGATCTCCTGCCAGTTTGTACAAGATCACCAACTCATATCTCTACCTAATGTTTCATACTTATACTACGATAGCTCCAGAGTTTCAGAACTAACTGATGAGGAGAGCTGTAAGCAAGCATGCTTGACCACTTGCTCTTGCAAGGCTGCCTTGTTTTGGTATGTTGATAATAAATCAGCTGGAGACTGTACCTTGGTATCACAAGTCCTCTCACTTAAGACAAGTTATCCAGGATACGATTCTTTAGCATTCCTGAAGGTCCAGATCACACCTTCACCTCACCTGGAAAAACATAGATTAGTACCTTTGGTTCCTGTGCTTGTAGGAGTTGCTTCTTTCTTTGTCATGCTCACCATTGTCTTGGTAGTTGTCCAAATACGGGCGTCAGCAAGACAAAGATGGCGAAGACGAGTTTGCTGAGCTACCTGGCATGCCAACAAGGTTTAGTTTTCAGATGTTAAAACTTGCAACCAAGGATTTCAGCAACAAACTAGGTGAAGGAGGATTTGGTTCAGTTTTCAGTGGACAGTTAGGTGAGGAGAAGATTGCAGTGAAGTGTTTGGATCAAGCAAGTCAAGGAAAAAGGGAATTCTTTGCAGAAGTCGAGACAATTGGAAGAATTCATCACATCAATTTGGTCAGGTTGATTGGCTTCTGTCTAGAGAAATCACACAGGCTCCTAGTGTATGAGTTTATGCCCAAGGGATCACTAGACCAATGGATCTACTACAAAGACAGCAATGATACTCTTGACTGGCGCACACGGCGCAATATCATCACCGACATTGCTAGGGCCCTTGCTTATCTTCATGAGGAGTGCACACATAAGATTGCTCATCTGGATATCAAACCACAAAATATCCTCTTAGATGATAACTTCAATGCCAAAGTTTGTGATTTTGGATTGTCTAGGCTGATACATAGGGACCAGAGTCACGTGACAACCAGAATGAGAGGAACACCTGGATATTTGTCCCCTGAATGGTTAACATCTCATATCACCGAGAAGGTTGATGTCTATAGTTATGGAGTTGTGATGATTGAAATCATCAATGGAAGGCCAAACCTTGACCATTCCAATCTTGGAGGGGGTATTCAGCTCCTTAAATTACTGCAAGAGAAGGCACAGAACAGTCACCTGGAAGATATGATTGACAGGAAGTGCAATGACATGTCCTTACACCAACAGGATGTGATAAAGATAATGAAGCTTGCAATGTGGTGCTTGCAGAGTGATTGCAACAGAAGGCCTTCCATGTCATTGGTGATGAAGGTCCTTGAAGGAGAAAGTGATGTTGAAGCCAACTTGAACTATAACTTCTTTGATTGCCGCCAGCGTTCATCCTGA
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| CDS seq | ATGGCCATGGCTCCTGTAAGCTTCCTCCTCATCTTCTTCCTCACCACCGCTGGTCTCACCCTCCAAACCTGCTGTTTCGACAGCCCAGGACACTCCGCGAACCTGTCCACCATCTGGACCTGCACTTCCCCAACAACCGATGTTCTCGTCGCTAACCCTCTACTCAGCCGGCCCGTACCAGACAATCACAACCTTCATTTTGCTGCAGGCTTCTACAATTACCCCCTGGTTAACACCTACATCTTTGGAGTCTACACTGTTACTGACGCCGGTGAATTTGCAGACATGACCTCTTGGCGCCCAGAACCCGTGGCAGATGTATGGTCGGCCAACAGGGACCAGTTGATCCGGCAGAACTCCACCCTAAGCTTCACGGCTGAGGGGGACCTGGTTCTTCAGCATCCGGATGGCAGCCTTGTCTGGTCTACCAACACTTCCGGCCAGTCTGTTGCAGGAATGACCCTCACAGAGTCCGGCAACCTGGTGCTGTATAATCACAACAACTTACCGGTCTGGCAGTCATTCGACCACCCAACGGATTCCTTGCTCCCTGGACAGAGATTGGTGCAAGGAATGAGATTGAAGCCTAACGCATTGGCAGTAAATCTGATTGCCAGCGACCTGTATTATTTAACTGTTCATTCGGATGGGCTCTATGCATTTGCAGGATCTAGCAACTCCCAGCCCTACTATGAGTTCACAGTGTCAACTGGAAACAAGTCACAGAATCCTCCAGCGTATTTAACTCTGGCGAACAGGAGCTTGGACATATTTGTTCCATCCTCTTCATCTGCAAATCTGGAACACTTGTCCCTTCAATCACCGGCTCTGTCTCTCCAGTACATTAGATTTGAATCTGATGGGCAACTCAGGTTGTATGAATGGCAAGCAGACCAAAATGGTAGATGGCTATATGTGCAGGACGTTTTCCCATTTCAGTACTGTGATTACCCAACTGTCTGCGGGGAGTATGGGATCTGCTTGAATGGACTGTGCTCCTGTCCAACTGCAACTGAAAGTCACATTCGATACTTCAGACCGGTCGATGACAGGAGACCACATCTTGGCTGCACACTGGAGACCCCGATCTCCTGCCAGTTTGTACAAGATCACCAACTCATATCTCTACCTAATGTTTCATACTTATACTACGATAGCTCCAGAGTTTCAGAACTAACTGATGAGGAGAGCTCTGGAGACTGTACCTTGGTATCACAAGTCCTCTCACTTAAGACAAGTTATCCAGGATACGATTCTTTAGCATTCCTGAAGTTGTCCAAATACGGGCGTCAGCAAGACAAAGATGGCGAAGACGAGTTTGCTGAGCTACCTGGCATGCCAACAAGGTTTAGTTTTCAGATGTTAAAACTTGCAACCAAGGATTTCAGCAACAAACTAGGTGAAGGAGGATTTGGTTCAGTTTTCAGTGGACAGTTAGGTGAGGAGAAGATTGCAGTGAAGTGTTTGGATCAAGCAAGTCAAGGAAAAAGGGAATTCTTTGCAGAAGTCGAGACAATTGGAAGAATTCATCACATCAATTTGGTCAGGTTGATTGGCTTCTGTCTAGAGAAATCACACAGGCTCCTAGTGTATGAGTTTATGCCCAAGGGATCACTAGACCAATGGATCTACTACAAAGACAGCAATGATACTCTTGACTGGCGCACACGGCGCAATATCATCACCGACATTGCTAGGGCCCTTGCTTATCTTCATGAGGAGTGCACACATAAGATTGCTCATCTGGATATCAAACCACAAAATATCCTCTTAGATGATAACTTCAATGCCAAAGTTTGTGATTTTGGATTGTCTAGGCTGATACATAGGGACCAGAGTCACGTGACAACCAGAATGAGAGGAACACCTGGATATTTGTCCCCTGAATGGTTAACATCTCATATCACCGAGAAGGTTGATGTCTATAGTTATGGAGTTGTGATGATTGAAATCATCAATGGAAGGCCAAACCTTGACCATTCCAATCTTGGAGGGGGTATTCAGCTCCTTAAATTACTGCAAGAGAAGGCACAGAACAGTCACCTGGAAGATATGATTGACAGGAAGTGCAATGACATGTCCTTACACCAACAGGATGTGATAAAGATAATGAAGCTTGCAATGTGGTGCTTGCAGAGTGATTGCAACAGAAGGCCTTCCATGTCATTGGTGATGAAGGTCCTTGAAGGAGAAAGTGATGTTGAAGCCAACTTGAACTATAACTTCTTTGATTGCCGCCAGCGTTCATCCTGA
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| Protein seq | MAMAPVSFLLIFFLTTAGLTLQTCCFDSPGHSANLSTIWTCTSPTTDVLVANPLLSRPVPDNHNLHFAAGFYNYPLVNTYIFGVYTVTDAGEFADMTSWRPEPVADVWSANRDQLIRQNSTLSFTAEGDLVLQHPDGSLVWSTNTSGQSVAGMTLTESGNLVLYNHNNLPVWQSFDHPTDSLLPGQRLVQGMRLKPNALAVNLIASDLYYLTVHSDGLYAFAGSSNSQPYYEFTVSTGNKSQNPPAYLTLANRSLDIFVPSSSSANLEHLSLQSPALSLQYIRFESDGQLRLYEWQADQNGRWLYVQDVFPFQYCDYPTVCGEYGICLNGLCSCPTATESHIRYFRPVDDRRPHLGCTLETPISCQFVQDHQLISLPNVSYLYYDSSRVSELTDEESSGDCTLVSQVLSLKTSYPGYDSLAFLKLSKYGRQQDKDGEDEFAELPGMPTRFSFQMLKLATKDFSNKLGEGGFGSVFSGQLGEEKIAVKCLDQASQGKREFFAEVETIGRIHHINLVRLIGFCLEKSHRLLVYEFMPKGSLDQWIYYKDSNDTLDWRTRRNIITDIARALAYLHEECTHKIAHLDIKPQNILLDDNFNAKVCDFGLSRLIHRDQSHVTTRMRGTPGYLSPEWLTSHITEKVDVYSYGVVMIEIINGRPNLDHSNLGGGIQLLKLLQEKAQNSHLEDMIDRKCNDMSLHQQDVIKIMKLAMWCLQSDCNRRPSMSLVMKVLEGESDVEANLNYNFFDCRQRSS |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [UniProtKB/Swiss-Prot:Q8RWZ5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os01g10700 | LOC_Os01g10700.1 | Chr01 | 5727326 | 5729756 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCCATGGCTCCTGTAAGCTTCCTCCTCATCTTCTTCCTCACCACCGCTGGTCTCACCCTCCAAACCTGCTGTTTCGACAGCCCAGGACACTCCGCGAACCTGTCCACCATCTGGACCTGCACTTCCCCAACAACCGATGTTCTCGTCGCTAACCCTCTACTCAGCCGGCCCGTACCAGACAATCACAACCTTCATTTTGCTGCAGGCTTCTACAATTACCCCCTGGTTAACACCTACATCTTTGGAGTCTACACTGTTACTGACGCCGGTGAATTTGCAGACATGACCTCTTGGCGCCCAGAACCCGTGGCAGATGTATGGTCGGCCAACAGGGACCAGTTGATCCGGCAGAACTCCACCCTAAGCTTCACGGCTGAGGGGGACCTGGTTCTTCAGCATCCGGATGGCAGCCTTGTCTGGTCTACCAACACTTCCGGCCAGTCTGTTGCAGGAATGACCCTCACAGAGTCCGGCAACCTGGTGCTGTATAATCACAACAACTTACCGGTCTGGCAGTCATTCGACCACCCAACGGATTCCTTGCTCCCTGGACAGAGATTGGTGCAAGGAATGAGATTGAAGCCTAACGCATTGGCAGTAAATCTGATTGCCAGCGACCTGTATTATTTAACTGTTCATTCGGATGGGCTCTATGCATTTGCAGGATCTAGCAACTCCCAGCCCTACTATGAGTTCACAGTGTCAACTGGAAACAAGTCACAGAATCCTCCAGCGTATTTAACTCTGGCGAACAGGAGCTTGGACATATTTGTTCCATCCTCTTCATCTGCAAATCTGGAACACTTGTCCCTTCAATCACCGGCTCTGTCTCTCCAGTACATTAGATTTGAATCTGATGGGCAACTCAGGTTGTATGAATGGCAAGCAGACCAAAATGGTAGATGGCTATATGTGCAGGACGTTTTCCCATTTCAGTACTGTGATTACCCAACTGTCTGCGGGGAGTATGGGATCTGCTTGAATGGACTGTGCTCCTGTCCAACTGCAACTGAAAGTCACATTCGATACTTCAGACCGGTCGATGACAGGAGACCACATCTTGGCTGCACACTGGAGACCCCGATCTCCTGCCAGTTTGTACAAGATCACCAACTCATATCTCTACCTAATGTTTCATACTTATACTACGATAGCTCCAGAGTTTCAGAACTAACTGATGAGGAGAGCTCTGGAGACTGTACCTTGGTATCACAAGTCCTCTCACTTAAGACAAGTTATCCAGGATACGATTCTTTAGCATTCCTGAAGTTGTCCAAATACGGGCGTCAGCAAGACAAAGATGGCGAAGACGAGTTTGCTGAGCTACCTGGCATGCCAACAAGGTTTAGTTTTCAGATGTTAAAACTTGCAACCAAGGATTTCAGCAACAAACTAGGTGAAGGAGGATTTGGTTCAGTTTTCAGTGGACAGTTAGGTGAGGAGAAGATTGCAGTGAAGTGTTTGGATCAAGCAAGTCAAGGAAAAAGGGAATTCTTTGCAGAAGTCGAGACAATTGGAAGAATTCATCACATCAATTTGGTCAGGTTGATTGGCTTCTGTCTAGAGAAATCACACAGGCTCCTAGTGTATGAGTTTATGCCCAAGGGATCACTAGACCAATGGATCTACTACAAAGACAGCAATGATACTCTTGACTGGCGCACACGGCGCAATATCATCACCGACATTGCTAGGGCCCTTGCTTATCTTCATGAGGAGTGCACACATAAGATTGCTCATCTGGATATCAAACCACAAAATATCCTCTTAGATGATAACTTCAATGCCAAAGTTTGTGATTTTGGATTGTCTAGGCTGATACATAGGGACCAGAGTCACGTGACAACCAGAATGAGAGGAACACCTGGATATTTGTCCCCTGAATGGTTAACATCTCATATCACCGAGAAGGTTGATGTCTATAGTTATGGAGTTGTGATGATTGAAATCATCAATGGAAGGCCAAACCTTGACCATTCCAATCTTGGAGGGGGTATTCAGCTCCTTAAATTACTGCAAGAGAAGGCACAGAACAGTCACCTGGAAGATATGATTGACAGGAAGTGCAATGACATGTCCTTACACCAACAGGATGTGATAAAGATAATGAAGCTTGCAATGTGGTGCTTGCAGAGTGATTGCAACAGAAGGCCTTCCATGTCATTGGTGATGAAGGTCCTTGAAGGAGAAAGTGATGTTGAAGCCAACTTGAACTATAACTTCTTTGATTGCCGCCAGCGTTCATCCTGA
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| Protein seq | MAMAPVSFLLIFFLTTAGLTLQTCCFDSPGHSANLSTIWTCTSPTTDVLVANPLLSRPVPDNHNLHFAAGFYNYPLVNTYIFGVYTVTDAGEFADMTSWRPEPVADVWSANRDQLIRQNSTLSFTAEGDLVLQHPDGSLVWSTNTSGQSVAGMTLTESGNLVLYNHNNLPVWQSFDHPTDSLLPGQRLVQGMRLKPNALAVNLIASDLYYLTVHSDGLYAFAGSSNSQPYYEFTVSTGNKSQNPPAYLTLANRSLDIFVPSSSSANLEHLSLQSPALSLQYIRFESDGQLRLYEWQADQNGRWLYVQDVFPFQYCDYPTVCGEYGICLNGLCSCPTATESHIRYFRPVDDRRPHLGCTLETPISCQFVQDHQLISLPNVSYLYYDSSRVSELTDEESSGDCTLVSQVLSLKTSYPGYDSLAFLKLSKYGRQQDKDGEDEFAELPGMPTRFSFQMLKLATKDFSNKLGEGGFGSVFSGQLGEEKIAVKCLDQASQGKREFFAEVETIGRIHHINLVRLIGFCLEKSHRLLVYEFMPKGSLDQWIYYKDSNDTLDWRTRRNIITDIARALAYLHEECTHKIAHLDIKPQNILLDDNFNAKVCDFGLSRLIHRDQSHVTTRMRGTPGYLSPEWLTSHITEKVDVYSYGVVMIEIINGRPNLDHSNLGGGIQLLKLLQEKAQNSHLEDMIDRKCNDMSLHQQDVIKIMKLAMWCLQSDCNRRPSMSLVMKVLEGESDVEANLNYNFFDCRQRSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0113650 | SBH | 0.775892 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g11750 | SBH | 0.0 | 0.084903 | 0.127862 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0113650 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0007670 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0007310 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0007640 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007160 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0007300 | SBH | 0.0 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0093700 | RBH | 0.15801 | 2.2955295 | 0.600377 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007230 | RBH | 0.000000 | 0.034428 | 0.466125 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0094000 | RBH | 0.2406045 | 1.0692515 | 1.1728 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007080 | SBH | 0.000000 | 0.021045 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0007270 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007280 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0007290 | SBH | 0.038251 | 0.079842 | 0.186018 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0007190 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G007290 | RBH | 0.041341 | 0.887793 | 0.131646 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0007100 | SBH | 0.204013 | 0.000000 | 0.580860 |
