Variation ID: ZS97RS3_J4155S_DEL0435100

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-1A: Zhenshan 97 | ZS97RS3
Os XI-adm: Jing4155S | J4155S
Chr04
14182613
14184520
SV Length:
Query Start:
Query End:
Allele sv Count:
1901 bp
27791828
27793728
39
Gene_id Chromosome Start End
OsJ4155_04g0277900 Chr04 27791735 27792720
OsJ4155_04g0278000 Chr04 27793212 27793362
SV_id Chromosome ref_start ref_end query_start query_end length
ZS97RS3_02428_DEL0438110 Chr04 14182613 14184520 28075461 28077361 1901
ZS97RS3_117425_DEL0426990 Chr04 14182613 14184520 26494687 26496587 1901
ZS97RS3_125619_DEL0415370 Chr04 14182613 14184520 28681137 28683037 1901
ZS97RS3_125827_DEL0421470 Chr04 14182613 14184572 29661846 29663796 1951
ZS97RS3_127518_DEL0414440 Chr04 14182613 14184572 28884887 28886837 1951
ZS97RS3_127564_DEL0430100 Chr04 14182613 14184572 29161011 29162961 1951
ZS97RS3_127742_DEL0410550 Chr04 14182613 14184572 28914733 28916670 1938
ZS97RS3_128077_DEL0431700 Chr04 14182613 14184520 26354606 26356506 1901
ZS97RS3_132278_DEL0438190 Chr04 14182613 14184520 27559521 27561421 1901
ZS97RS3_Azucena_DEL0436050 Chr04 14182613 14184520 26276915 26278815 1901
ZS97RS3_Basmati1_DEL0434390 Chr04 14182613 14184520 26044443 26046343 1901
ZS97RS3_CN1_DEL0426840 Chr04 14182613 14184572 28311983 28313933 1951
ZS97RS3_D62_DEL0416610 Chr04 14182613 14184572 28344540 28346490 1951
ZS97RS3_DHX2_DEL0436360 Chr04 14182613 14184520 26947672 26949572 1901
ZS97RS3_G630_DEL0413310 Chr04 14182613 14184572 28926458 28928408 1951
ZS97RS3_G8_DEL0405800 Chr04 14182613 14184572 28623945 28625882 1938
ZS97RS3_HZ_DEL0410620 Chr04 14182613 14184572 29086400 29088337 1938
ZS97RS3_IR64_DEL0425980 Chr04 14182613 14184572 27272258 27274195 1938
ZS97RS3_J4155_DEL0434270 Chr04 14182613 14184520 27223923 27225823 1901
ZS97RS3_J4155S_DEL0435100 Chr04 14182613 14184520 27791828 27793728 1901
ZS97RS3_Kosh_DEL0439190 Chr04 14182613 14184520 27744207 27746107 1901
ZS97RS3_KY131_DEL0436540 Chr04 14182613 14184520 28172783 28174683 1901
ZS97RS3_Lemont_DEL0436500 Chr04 14182613 14184520 27076944 27078844 1901
ZS97RS3_LJ_DEL0437830 Chr04 14182613 14184520 27075455 27077355 1901
ZS97RS3_NamRoo_DEL0438950 Chr04 14182613 14184520 28031648 28033548 1901
ZS97RS3_Nipponbare_DEL0437110 Chr04 14182613 14184520 27686717 27688617 1901
ZS97RS3_R498_DEL0418460 Chr04 14182613 14184572 27806917 27808854 1938
ZS97RS3_R527_DEL0418330 Chr04 14182613 14184572 28387578 28389515 1938
ZS97RS3_R9311_DEL0412100 Chr04 14182613 14184572 28995439 28997376 1938
ZS97RS3_S548_DEL0418810 Chr04 14182613 14184572 27868635 27870572 1938
ZS97RS3_TM_DEL0425310 Chr04 14182613 14184572 27033252 27035202 1951
ZS97RS3_Tumba_DEL0428400 Chr04 14182613 14184572 29354326 29356276 1951
ZS97RS3_WSSM_DEL0412860 Chr04 14182613 14184572 28475655 28477592 1938
ZS97RS3_Y3551_DEL0419620 Chr04 14182613 14184572 29148022 29149972 1951
ZS97RS3_Y58S_DEL0419950 Chr04 14182613 14184520 28882633 28884533 1901
ZS97RS3_YX1_DEL0416720 Chr04 14182613 14184572 27370313 27372250 1938
ZS97RS3_ZH11_DEL0437820 Chr04 14182613 14184520 27233580 27235480 1901
ZS97RS3_OglaRS2_DEL0444710 Chr04 14182613 14184572 24355235 24357160 1926
ZS97RS3_MH63RS3_DEL0419750 Chr04 14182613 14184572 29407706 29409656 1951

>ZS97RS3_J4155S_DEL0435100
CAAGGTCCAAGTGTACTGCTTCGAGGTCCTTTTATTCAATCAGTGCTTTTCGAGTTTTATGATTTATTCATGACAATACCAGCATGGACAACGTTCCGAGGGGAAAACCAGTCATTTTGATTTCTGACAGTGAAGATGGTAAACCAAATTCTTTTTCCTACTTATTCATGTCCTTTCTTCTTTGTTTCGAACTAAAATGGTGCTTACAAACCAAAAACACGGGAAATATTATTGTAGATGATGATGAAGTTGCTAAGATATATCAAAGCGTGCGCAAGTGCTCCATTGAAAGAGGTGATTATTTTCATATAAATAATTAATAAGTCCAAATGTACAGAATGTTAGGTACTGCTAGTCAGATGATGTGCTTGTCAAACTTCCAATTTCAGGTCAATATGGACCTCGCACCTTCCCTGGATTTGATAGGTAGTACTGGTATGGGACTGAACATGCAGTACAAAATTGCTCACATTGCTGTAAGCAATTTGCCTACCATTCCACTCTATGTGTATGAGATCCAGATGACTAATTTGACAAAAGGGAAAATGGTATGGTTCACAAATCTGACTGCCCTGTATTTGCATTTGTTTATACATAAATGTCCTGTGTCTAAATGTCTTGTTTATATTTTTTAGGCCTTCAGTTTGCCATTTAGCAAGCAGTACATAAACAACCACCTTTCAACACCAATTGATGATTTACTTGTGACTCTGGTTGGATCAGCTGAATCCTTTGAGATGAGACTGAAGAAATCCAAAGATAAGCGGGCTACCTTTACAACTAGATGGAACAAGTTGGTTCAAGCCAATTTATTCGAGCTTGGTGATGTTTGTGTGTTTCTGTTCACTGAAGTTGATGATGACCTATGTATTACTCTTGAGGTTCTCAACTAGTGTAATGGATGAAGAACTTTGATGTGCCCCCTCATAATGTAGTAGTATGCCCCCTCCTAGTGTAGTATCTGCACCTTATGTAATGGATACTATGCAGCAGCTTTTGTTCAACTTTAATGGAGGCCATGCAGCAGCTTATGTTCTAAGTTAAGACAATGTTATTCTGATGTAATATATTTATCATCTATTTCCCTAAAATTACCTAGTTGTTTGCATCACTTCAAATCTGATATGGCAAGTGTACAGTTTTTATGCTACTGGAGTTGTTGATTGTTGTTGGAATCACTGCTACAAAATTAAAATGGCTGCCCGTTCTGTTCTGAAAACTAAAAACATGCTACGGAAGCTTCATCTTGATTGTTGCTGGAATACTATACTTAATTGGGCTGAAAACACACAGAACAGAAGCAGCTGGCATGAATACAAATGAGTTTAAGAAACTTTAGTTGGCTGGAATACAAATGTAAGGTGCACACACAAGAGCGTCGGACGATGCAGGAACAACAGAGACCACAACAGCAGGAAGCGACGCCCGAGTATTCCGGCTGGATGCGACGGTGGATGCGGCAGGGTGGAGGCGGCGATTTTGATGCGCCTGGCGTCGTCGTGGATGAGTCGATGCGCCTGCGGATGGCTGGATGAGACAACGAGTTCTTGCGACGGCGGGATGGATGCGCCGGGGTGGAGGCTGCCGCTGTATGCGACGACGGGATGCGCCGCTATTGACGACGGGATGCGGGTTGGACGTCTGCCGCGGCGTCCTCGACGGCGGCAGACGCGTGTTCGACGCGCGGCCGCGGTGGCGTCGAGGGTACGTCGGCCGCGGGGGAATACCTGCGATGAGACGGCGGCTGCGGCGGACAAGATGAGACGCCGGCAACAGATATTGGCGCTTGGCGGCCGCCGCAGACTATTGGCTGGGATGGGCGGTGATTAACGCTACCCTAATTTGTTTAGCCCCATCATACCCTTCCTAAATCAACGGTCAGATTACATTGGTACCTCATG

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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