Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Nipponbare_MH63RS3_TRA0339210

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

TRA

Os GJ-temp: Nipponbare | IRGSP 1.0

Os XI-adm: Minghui 63 | MH63RS3

Chr03

32049677

32049916

SV Length:

Query Start:

Query End:

Allele sv Count:

240 bp

15759766

15760005

2

Gene_id	Chromosome	Start	End
OsMH63_03G0249100	Chr03	15758302	15759788

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Nipponbare_R498_TRA0338640	Chr03	32049677	32049916	15601692	15601931	240
Nipponbare_MH63RS3_TRA0339210	Chr03	32049677	32049916	15759766	15760005	240

>Nipponbare_MH63RS3_TRA0339210
TACTCCCTCCGTTTCGAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAATTATATGTCTACATAAAAATATATTTAACAATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTCAAAACGGAGAGAGTAT