Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0249100 | OGI:03040280 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:15758303-15759788 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_TRA0319500,02428_MH63RS3_TRA0343740,127652_MH63RS3_INS0329830,Y3551_MH63RS3_INS0325120,ZH11_MH63RS3_TRA0320370,ZH11_MH63RS3_DEL0341340,DHX2_MH63RS3_TRA0341600,KY131_MH63RS3_TRA0319650,XL628S_MH63RS3_INS0323150,IR64_MH63RS3_INS0303520,Kosh_MH63RS3_TRA0320440,Kosh_MH63RS3_DEL0341580,LK638S_MH63RS3_INS0320810,G8_MH63RS3_INS0321760,117534_MH63RS3_INS0333290,J4155S_MH63RS3_INS0320690,G46_MH63RS3_INS0325100,J4155_MH63RS3_INS0319510,117425_MH63RS3_INS0332230,Nipponbare_MH63RS3_TRA0339210,127742_MH63RS3_INS0301930,
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| DNA seq | CCCAAAAGTACTACTAACGATTTTATAATCACTAGGCTACAGCCACTTTCACATTTTTCTCCCTTTCTCTGTCTCTGTGTATATATATATAAGGCTAAGCTCAAGCTTCCTTCCATCTGGTATAGCTATAGCAAGTGTTGGACCACGGATCGATCGATCGATGGGGCGGCCGCCGTGTTGCGAGAAGGAGGGGGTGAAGAAGGGGCCATGGACGCCGGAGGAGGACATGGTGCTGGCGTCGTACGTGCAGGAGCACGGCCCGGGCAACTGGCGCGCCGTGCCGCCCAGGACGGGCCTCCTCCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGCCCGGGCATCCGCCGCGGCGGCTTCTCCCACCACGAGGAGCGCCTCATCCTCCACCTCCAGGCCCTCCTCGGCAACCGCTGGGCCGCCATCGCCTCCTACCTCCCCCACCGCACCGACAACGACGTCAAGAACTTCTGGAACACCCACCTCAAGAAGAAGCTCGCCCTCACCTCCTCCTCCTCCTCGCCGCCGACGCCGACGACGCCGCTCGTCGCCAGGGGGCAGTGGGAGCGCAAGCTGCAGACCGACATCGACCTCGCCAGGCGCGCCCTCCGCGACGCCCTCTCCGTCGACGACGCCGCCTCCCCGGCGATGATCAGCAGCGGGCCGCCCGCGCCGGCGGCGGCGGCGGCGTACGCCCTGAGCGAGCGCAACATCTCCGTGATGCTGAGCGGCTGGGCGGCGCCGCCTCCGGCCAGGAAAGGATTGTCAGCCTGCAACCCGGCGGCGGCGACGCCGACGCCCGGTGGCGCCGCCGCGGAGAGCGCGTCCACGGCCGGGGCGTCGTCGGAGCTCACCACCGACTGCTGCTCCGGCGGCGGCGACTCCAGCGTCTCCAACTGCCTGCCGTCGTCCATGCTCCCCGCGTGCGACGACGGCGACGCGACGGCGACGGCGGCCGGGGTGGCGCCGCTGTCGGCGATCGAGTCGTGGCTGCTGCTCGACGACAGCGGCGAGCCGCAGCTGGCACTGGACGAGCAGCTGCTTGACGTAGCTCTCCGTAATTACGCTTTCTAATTAATTAATTAATTAATTACTACCAATCAATGCAAGTACTGGTACTAGAGCCACACGACTTGATTAAGAATTAATTCGAGTTAATTGCTTAGCTTTTAGCCTAGCTAGCTAGCCAGTGGTTACTACTACCAGTTGTTGCTGGATTTTACTGTTTACTCTTGCTACTAGTGCTTTTGATCCGTACAACAGTACGCACATGAATATACACTGATATGTTAGAGCAAGTATAATACTTAGCTTCTATAAACTTATAAACTTACGTAGAGGAGAGAGGTAACAAAAAAAAAATCAAGGATGTTGGCTCTAAAATAAATACATTAAATGTATAAGTGAGAGATAGAGAGAGGAGAAAAAATTGTAGCCAACCTTATATCTAATCTACTCCCTCCGTTTCGAAATGTT
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| CDS seq | MGRPPCCEKEGVKKGPWTPEEDMVLASYVQEHGPGNWRAVPPRTGLLRCSKSCRLRWTNYLRPGIRRGGFSHHEERLILHLQALLGNRWAAIASYLPHRTDNDVKNFWNTHLKKKLALTSSSSSPPTPTTPLVARGQWERKLQTDIDLARRALRDALSVDDAASPAMISSGPPAPAAAAAYALSERNISVMLSGWAAPPPARKGLSACNPAAATPTPGGAAAESASTAGASSELTTDCCSGGGDSSVSNCLPSSMLPACDDGDATATAAGVAPLSAIESWLLLDDSGEPQLALDEQLLDVALRNYAF |
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| Protein seq | MGRPPCCEKEGVKKGPWTPEEDMVLASYVQEHGPGNWRAVPPRTGLLRCSKSCRLRWTNYLRPGIRRGGFSHHEERLILHLQALLGNRWAAIASYLPHRTDNDVKNFWNTHLKKKLALTSSSSSPPTPTTPLVARGQWERKLQTDIDLARRALRDALSVDDAASPAMISSGPPAPAAAAAYALSERNISVMLSGWAAPPPARKGLSACNPAAATPTPGGAAAESASTAGASSELTTDCCSGGGDSSVSNCLPSSMLPACDDGDATATAAGVAPLSAIESWLLLDDSGEPQLALDEQLLDVALRNYAF |
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| Function | Myb-related protein 306 [UniProtKB/Swiss-Prot:P81392] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0249100 | OsMH63_03T0249100.1 | Chr03 | 15758303 | 15759788 | + | maker | ||
| CDS seq | ATGGGGCGGCCGCCGTGTTGCGAGAAGGAGGGGGTGAAGAAGGGGCCATGGACGCCGGAGGAGGACATGGTGCTGGCGTCGTACGTGCAGGAGCACGGCCCGGGCAACTGGCGCGCCGTGCCGCCCAGGACGGGCCTCCTCCGCTGCAGCAAGAGCTGCCGCCTCCGCTGGACCAACTACCTCCGCCCGGGCATCCGCCGCGGCGGCTTCTCCCACCACGAGGAGCGCCTCATCCTCCACCTCCAGGCCCTCCTCGGCAACCGCTGGGCCGCCATCGCCTCCTACCTCCCCCACCGCACCGACAACGACGTCAAGAACTTCTGGAACACCCACCTCAAGAAGAAGCTCGCCCTCACCTCCTCCTCCTCCTCGCCGCCGACGCCGACGACGCCGCTCGTCGCCAGGGGGCAGTGGGAGCGCAAGCTGCAGACCGACATCGACCTCGCCAGGCGCGCCCTCCGCGACGCCCTCTCCGTCGACGACGCCGCCTCCCCGGCGATGATCAGCAGCGGGCCGCCCGCGCCGGCGGCGGCGGCGGCGTACGCCCTGAGCGAGCGCAACATCTCCGTGATGCTGAGCGGCTGGGCGGCGCCGCCTCCGGCCAGGAAAGGATTGTCAGCCTGCAACCCGGCGGCGGCGACGCCGACGCCCGGTGGCGCCGCCGCGGAGAGCGCGTCCACGGCCGGGGCGTCGTCGGAGCTCACCACCGACTGCTGCTCCGGCGGCGGCGACTCCAGCGTCTCCAACTGCCTGCCGTCGTCCATGCTCCCCGCGTGCGACGACGGCGACGCGACGGCGACGGCGGCCGGGGTGGCGCCGCTGTCGGCGATCGAGTCGTGGCTGCTGCTCGACGACAGCGGCGAGCCGCAGCTGGCACTGGACGAGCAGCTGCTTGACGTAGCTCTCCGTAATTACGCTTTCTAA
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| Protein seq | MGRPPCCEKEGVKKGPWTPEEDMVLASYVQEHGPGNWRAVPPRTGLLRCSKSCRLRWTNYLRPGIRRGGFSHHEERLILHLQALLGNRWAAIASYLPHRTDNDVKNFWNTHLKKKLALTSSSSSPPTPTTPLVARGQWERKLQTDIDLARRALRDALSVDDAASPAMISSGPPAPAAAAAYALSERNISVMLSGWAAPPPARKGLSACNPAAATPTPGGAAAESASTAGASSELTTDCCSGGGDSSVSNCLPSSMLPACDDGDATATAAGVAPLSAIESWLLLDDSGEPQLALDEQLLDVALRNYAF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.1788135 | 0.192742 | 0.131999 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0388600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g26130 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0388600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0019680 | RBH | 0.0 | 0.0 | 0.553510 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0019540 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0019540 | RBH | 0.0 | 1.952241 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0019590 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0019340 | RBH | 0.0 | 0.0 | 0.989476 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0428100 | RBH | 1.655506 | 0.4346965 | 5.9983845 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0019200 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0249700 | RBH | 0.380206 | 0.612637 | 0.239286 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0019360 | RBH | 0.0 | 0.122359 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0019370 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0019440 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0019300 | RBH | 0.0 | 0.670717 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0019220 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G019300 | RBH | 0.0 | 0.0 | 0.310720 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0019150 | RBH | 0.0 | 1.524438 | 0.666832 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g11969 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0214300 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0213000 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0196100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0217300 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0304717500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0311263500.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_007403 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0310021700.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0310894500.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0305180500.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0304723300.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0306478300.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0305179700.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0305222100.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0304674700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0304697700.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0310650300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0304705300.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0304713700.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0304013300.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0304746700.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0304741900.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0304722300.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0363038800.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0305307100.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0314038100.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0306825900.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0304656700.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0304689900.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0304734900.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0304716300.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0307131900.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0304760300.01 | RBH | None | None | None |
