Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Lemont_127742_INS0438370

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-trp: Lemont | Lemont

Os XI-1B2: PR 106 | Os127742RS1

Chr04

16819688

16820011

SV Length:

Query Start:

Query End:

Allele sv Count:

319 bp

28910757

28911075

5

Gene_id	Chromosome	Start	End
OsPr106_04g0022670	Chr04	28906579	28916265

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Lemont_117534_INS0441410	Chr04	16819688	16820011	26890713	26891035	323
Lemont_127742_INS0438370	Chr04	16819688	16820011	28910757	28911075	319
Lemont_HZ_INS0437750	Chr04	16819688	16820011	29082424	29082742	319
Lemont_R527_INS0434090	Chr04	16819688	16820011	28383602	28383920	319
Lemont_S548_INS0433800	Chr04	16819688	16826678	32462829	32469804	6976

>Lemont_127742_INS0438370
tgtagcgcccgttccgtcgtggcgcctagcgggaaaattatctcttaaaaaccctaattgcgaaatttgtttctttgcttgttgtctagtgtccgtgccatctcaagatctcaaatccccgatatatcgtcgagttcaattccgaatctaaatccttccaaatcaaatccctccgcaaaagtctattttgcctcccccggggtcgatgggccgaatctctttcggcccatctccccctccctctcggcgctctctctctctctctctctctctctccctctctcccttcccctcgctctgcccgcgcgtgcgcgagcgc