Variation ID: LK638S_Nipponbare_INS0453950

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os XI-adm: Longke638S | LK638S
Os GJ-temp: Nipponbare | IRGSP 1.0
Chr04
28027031
28028849
SV Length:
Query Start:
Query End:
Allele sv Count:
1820 bp
27682347
27684166
22
Gene_id Chromosome Start End
LOC_Os04g46690 Chr04 27680026 27687609
SV_id Chromosome ref_start ref_end query_start query_end length
LK638S_02428_INS0455580 Chr04 28027031 28029891 32940474 32943336 2863
LK638S_125619_INS0439350 Chr04 28027031 28028849 28676767 28678586 1820
LK638S_128077_INS0448680 Chr04 28027031 28029093 12684948 12686983 2036
LK638S_128077_INS0448680_1 Chr04 28027031 28029807 6356794 6359581 2788
LK638S_132278_INS0453560 Chr04 28027031 28028849 27555151 27556970 1820
LK638S_132278_INS0453560_1 Chr04 28027031 28029891 32519472 32522334 2863
LK638S_Azucena_INS0452230 Chr04 28027031 28028849 26272545 26274364 1820
LK638S_DHX2_INS0457060 Chr04 28027031 28028849 26943303 26945122 1820
LK638S_J4155_INS0439760 Chr04 28027031 28028849 27219553 27221372 1820
LK638S_J4155_INS0439760_1 Chr04 28027031 28029807 6314612 6317399 2788
LK638S_J4155S_INS0441740 Chr04 28027031 28028849 27787458 27789277 1820
LK638S_J4155S_INS0441740_1 Chr04 28027031 28029807 6458490 6461277 2788
LK638S_Kosh_INS0456460 Chr04 28027031 28028849 27739837 27741656 1820
LK638S_Kosh_INS0456460_1 Chr04 28027031 28029807 7072351 7075138 2788
LK638S_KY131_INS0453990 Chr04 28027031 28028849 28168413 28170232 1820
LK638S_Lemont_INS0451930 Chr04 28027031 28029807 6081863 6084650 2788
LK638S_LJ_INS0456510 Chr04 28027031 28029807 5518501 5521285 2785
LK638S_NamRoo_INS0454460 Chr04 28027031 28029807 6558939 6561726 2788
LK638S_NamRoo_INS0454460_1 Chr04 28027031 28029891 33275871 33278733 2863
LK638S_Nipponbare_INS0453950 Chr04 28027031 28028849 27682347 27684166 1820
LK638S_Nipponbare_INS0453950_1 Chr04 28027031 28029807 6674263 6677051 2789
LK638S_ZH11_INS0456900 Chr04 28027031 28029807 6467871 6470657 2787

>LK638S_Nipponbare_INS0453950
TGTCACGCCCCGAGCTAGTCCTGACTGGAATTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACCAGTCCCAGGAAAACAGTGCTGGTATCATAGAGAGACAGAATATCACAGCAACAGAGGTCTCTTTATTATAGAGTAGAAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAACGGAAGCCAGGGCTTGGACCAAACATCATAGGCGCGACTTGGGAACTAGGTCGAAACCCTAAAACTCATCGAAGCCGGCTTGCTCCTGGAAGAACTCTTCATCAGCAGGATCCGCTTCATCTTCTTCAGCAACTGGGGGGGTTATTTATATAGAGCAAAGGTGAGTACAGGAGTACTCAGCAAGCCAGGGGAAATAAGTGTTTAATGCAGGCTTCAAGGAAAGGCTGTTGTTTTCGTAATTGATTTTATTTGAACTCTTTTCTGAAACAACTAAGTGAGTGCTTCTCAAACGACACGGATGAGACAGTGCGTCTTGTCCGAACGGAGTATGTGCAATGTATCAGTCTTTAGATTTTGAAACAAGGTTGGCACCCGGCCAACAGCTTTTCAACGGCCACCCGGGCCAACAACTTTTCAAACGGCCACCCGGGCCAACCACTTTCAAACGGCCACCCGGGCCTAGCTGATCCCGTCAGCTACAGATTTTTCAAACATCAAACCCCTTTTCACAACAGCAATTTCACAAGCAGTAGTCAAACAAAACTACGCTAAGAATCACCTCACATCCGCCCATGACCGTGGGCACGGCTGTTCGAACAGTTAGTTAACCTCTACAGAGGGGGTACACTTTACCCACACGACATTACTAACCCGGATCACCCAGCCCGTGGGGATCAGCCACGTCGGGAGACCTCCAAGCTTTCATGACAAGGCATTTCGAAAGCCGACACAGGTTTACCATATGCCGACGAGAGGGGTCCCAGACCAACAACAGGCTAGGTCCCAGACCATACTGTGCCAGGAAGCCCAGGGGGGTCCTCTCCGACACCACCCCGGCGAATCCACATGTCTCTCGGCATCATGGCTCCCCTGATAAGCTAGTTACTCAGCCAGGGGTGTCCCATTCCACCCATGTGGTCGTACTTGTCTTATGTTTGGATGAAATTCCAAGGAAACGGTCCTTAAGTGCAAGAGCGGGAAACCGTACACCCGGTACGTTCCCCGGTCCGCGGTTTTAGAAATTCATTTAGTTCGCAAGCACCGACCCAGGTGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCAAGTTGTTTTTCAGATTTTAAGTTTGAAGGCGACCGTCGATACTCGCACAGAGTGCACGAATATCGAGGCGCAACTGGGTGGTTACAAGGGGACATGGTATAACAATTAACAAAGGAAGGATCAAATGCAACAAATTAGGCAGGTCCGCCAATCTGCCTTGCAGACGGGACAACCGATTAAGTGCGATCCTATCAATGCATAATATTTTGCAAGCAATATAATTAAATTTCAAATATAGGCTCAAGATGTTCAAAGGTGGCTTGCCTTGCTCGAGATCCGGAGCTTGATCCTCGAAATCCTCGCACTGCGGGTCTTCGGGCTCCGAAACTACACGCGAAACGGGACAACTCAACAAACGGCGAAAATAAAGCCCTATTAATGACCTCTAAGCGTGCCATTAGGTAGATCTCGAGATTTGGGGAATTTTGGAAGTTGAACGGAGTCAATCGGATTTACGGTTGGGAAGATATTGAATTTCTAAGATTATTGGATTTTTGGTCTGAAGGAAAAAGGATTTA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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