Variation ID: G8_Nipponbare_INS0453200

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os XI-1B: G8 | G8
Os GJ-temp: Nipponbare | IRGSP 1.0
Chr04
27832777
27834593
SV Length:
Query Start:
Query End:
Allele sv Count:
1820 bp
27682347
27684166
42
Gene_id Chromosome Start End
LOC_Os04g46690 Chr04 27680026 27687609
SV_id Chromosome ref_start ref_end query_start query_end length
G8_02428_INS0454010 Chr04 27832777 27835549 6413136 6415923 2788
G8_02428_INS0454010_1 Chr04 27832777 27836646 28433028 28436961 3934
G8_117425_INS0441980 Chr04 27832777 27834593 26490317 26492136 1820
G8_117425_INS0441980_1 Chr04 27832777 27836646 26856826 26860761 3936
G8_117534_INS0444330 Chr04 27832777 27836646 27327167 27331104 3938
G8_117534_INS0444330_1 Chr04 27832777 27836646 19276133 19281005 4873
G8_127652_INS0452940 Chr04 27832777 27834353 16353491 16355043 1553
G8_128077_INS0445300 Chr04 27832777 27834593 26350236 26352055 1820
G8_128077_INS0445300_1 Chr04 27832777 27836646 26708477 26712412 3936
G8_132278_INS0453780 Chr04 27832777 27836646 27909166 27913099 3934
G8_132278_INS0453780_1 Chr04 27832777 27836646 19896035 19900908 4874
G8_Azucena_INS0450790 Chr04 27832777 27834593 26272545 26274364 1820
G8_Azucena_INS0450790_1 Chr04 27832777 27834837 12531627 12533662 2036
G8_Azucena_INS0450790_2 Chr04 27832777 27835549 6258583 6261370 2788
G8_Azucena_INS0450790_3 Chr04 27832777 27836646 26664721 26668656 3936
G8_Basmati1_INS0450370 Chr04 27832777 27836646 26398447 26402383 3937
G8_DHX2_INS0455290 Chr04 27832777 27834593 26943303 26945122 1820
G8_DHX2_INS0455290_1 Chr04 27832777 27835986 27301689 27304902 3214
G8_J4155_INS0441330 Chr04 27832777 27834593 27219553 27221372 1820
G8_J4155_INS0441330_1 Chr04 27832777 27835549 6314612 6317399 2788
G8_J4155S_INS0443110 Chr04 27832777 27834593 27787458 27789277 1820
G8_J4155S_INS0443110_1 Chr04 27832777 27835549 6458490 6461277 2788
G8_J4155S_INS0443110_2 Chr04 27832777 27836646 28182966 28186905 3940
G8_Kosh_INS0455920 Chr04 27832777 27834593 27739837 27741656 1820
G8_Kosh_INS0455920_1 Chr04 27832777 27836646 28098288 28102227 3940
G8_KY131_INS0453300 Chr04 27832777 27834593 28168413 28170232 1820
G8_KY131_INS0453300_1 Chr04 27832777 27835549 6878187 6880974 2788
G8_KY131_INS0453300_2 Chr04 27832777 27836646 28516645 28520576 3932
G8_Lemont_INS0450660 Chr04 27832777 27834593 27072574 27074393 1820
G8_Lemont_INS0450660_1 Chr04 27832777 27835549 6081863 6084650 2788
G8_Lemont_INS0450660_2 Chr04 27832777 27836646 27442604 27446525 3922
G8_LJ_INS0453440 Chr04 27832777 27834593 27071085 27072904 1820
G8_LJ_INS0453440_1 Chr04 27832777 27835549 5518501 5521285 2785
G8_LJ_INS0453440_2 Chr04 27832777 27836646 27432235 27436171 3937
G8_NamRoo_INS0454490 Chr04 27832777 27835549 6558939 6561726 2788
G8_NamRoo_INS0454490_1 Chr04 27832777 27836646 28386926 28390859 3934
G8_Nipponbare_INS0453200 Chr04 27832777 27834593 27682347 27684166 1820
G8_Nipponbare_INS0453200_1 Chr04 27832777 27835549 6674263 6677051 2789
G8_Nipponbare_INS0453200_2 Chr04 27832777 27836646 28040600 28044536 3937
G8_Y58S_INS0428030 Chr04 27832777 27834593 28878263 28880082 1820
G8_Y58S_INS0428030_1 Chr04 27832777 27836646 29248374 29252310 3937
G8_ZH11_INS0455960 Chr04 27832777 27836646 27587604 27591552 3949

>G8_Nipponbare_INS0453200
TGTCACGCCCCGAGCTAGTCCTGACTGGAATTAGCCCGTGACGCTCCAAATTAACCTGTTAATCGATACCAGTCCCAGGAAAACAGTGCTGGTATCATAGAGAGACAGAATATCACAGCAACAGAGGTCTCTTTATTATAGAGTAGAAGTACAGTCATGTTGGGCTGCGGACAGATCCCGAGCTCACAACTGCATTACAAAAGGGAAACGGAAGCCAGGGCTTGGACCAAACATCATAGGCGCGACTTGGGAACTAGGTCGAAACCCTAAAACTCATCGAAGCCGGCTTGCTCCTGGAAGAACTCTTCATCAGCAGGATCCGCTTCATCTTCTTCAGCAACTGGGGGGGTTATTTATATAGAGCAAAGGTGAGTACAGGAGTACTCAGCAAGCCAGGGGAAATAAGTGTTTAATGCAGGCTTCAAGGAAAGGCTGTTGTTTTCGTAATTGATTTTATTTGAACTCTTTTCTGAAACAACTAAGTGAGTGCTTCTCAAACGACACGGATGAGACAGTGCGTCTTGTCCGAACGGAGTATGTGCAATGTATCAGTCTTTAGATTTTGAAACAAGGTTGGCACCCGGCCAACAGCTTTTCAACGGCCACCCGGGCCAACAACTTTTCAAACGGCCACCCGGGCCAACCACTTTCAAACGGCCACCCGGGCCTAGCTGATCCCGTCAGCTACAGATTTTTCAAACATCAAACCCCTTTTCACAACAGCAATTTCACAAGCAGTAGTCAAACAAAACTACGCTAAGAATCACCTCACATCCGCCCATGACCGTGGGCACGGCTGTTCGAACAGTTAGTTAACCTCTACAGAGGGGGTACACTTTACCCACACGACATTACTAACCCGGATCACCCAGCCCGTGGGGATCAGCCACGTCGGGAGACCTCCAAGCTTTCATGACAAGGCATTTCGAAAGCCGACACAGGTTTACCATATGCCGACGAGAGGGGTCCCAGACCAACAACAGGCTAGGTCCCAGACCATACTGTGCCAGGAAGCCCAGGGGGGTCCTCTCCGACACCACCCCGGCGAATCCACATGTCTCTCGGCATCATGGCTCCCCTGATAAGCTAGTTACTCAGCCAGGGGTGTCCCATTCCACCCATGTGGTCGTACTTGTCTTATGTTTGGATGAAATTCCAAGGAAACGGTCCTTAAGTGCAAGAGCGGGAAACCGTACACCCGGTACGTTCCCCGGTCCGCGGTTTTAGAAATTCATTTAGTTCGCAAGCACCGACCCAGGTGTCGGGTTTTCCAAGTCTTTTGTAAAACCCAAGTTTTACCCAAGTTGTTTTTCAGATTTTAAGTTTGAAGGCGACCGTCGATACTCGCACAGAGTGCACGAATATCGAGGCGCAACTGGGTGGTTACAAGGGGACATGGTATAACAATTAACAAAGGAAGGATCAAATGCAACAAATTAGGCAGGTCCGCCAATCTGCCTTGCAGACGGGACAACCGATTAAGTGCGATCCTATCAATGCATAATATTTTGCAAGCAATATAATTAAATTTCAAATATAGGCTCAAGATGTTCAAAGGTGGCTTGCCTTGCTCGAGATCCGGAGCTTGATCCTCGAAATCCTCGCACTGCGGGTCTTCGGGCTCCGAAACTACACGCGAAACGGGACAACTCAACAAACGGCGAAAATAAAGCCCTATTAATGACCTCTAAGCGTGCCATTAGGTAGATCTCGAGATTTGGGGAATTTTGGAAGTTGAACGGAGTCAATCGGATTTACGGTTGGGAAGATATTGAATTTCTAAGATTATTGGATTTTTGGTCTGAAGGAAAAAGGATTTA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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