Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: G46_J4155S_INS1209920

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-1A: G46 | G46

Os XI-adm: Jing4155S | J4155S

Chr12

9037408

SV Length:

Query Start:

Query End:

Allele sv Count:

120 bp

9278652

9278771

39

Gene_id	Chromosome	Start	End
OsJ4155_12g0103300	Chr12	9274739	9280175

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
G46_02428_INS1218070	Chr12	9037408	9037408	9241274	9241393	120
G46_117425_INS1212760	Chr12	9037408	9037408	9278722	9278839	118
G46_125827_INS1210310	Chr12	9037408	9037408	9129776	9129895	120
G46_127564_INS1210800	Chr12	9037408	9037408	9069746	9069865	120
G46_127652_INS1212570	Chr12	9037408	9037408	9152889	9153006	118
G46_127742_INS1206850	Chr12	9037408	9037408	8985893	8986012	120
G46_128077_INS1216620	Chr12	9037408	9037408	9162612	9162731	120
G46_132278_INS1215850	Chr12	9037408	9037408	9729833	9729952	120
G46_132424_INS1209570	Chr12	9037408	9037408	9108452	9108571	120
G46_Basmati1_INS1214240	Chr12	9037408	9037408	9873506	9873623	118
G46_CN1_INS1209410	Chr12	9037408	9037408	9112402	9112521	120
G46_D62_INS1209440	Chr12	9037408	9037408	9220546	9220665	120
G46_DHX2_INS1218060	Chr12	9037408	9037408	9228198	9228317	120
G46_FH838_INS1208090	Chr12	9037408	9037408	8925854	8925973	120
G46_FS32_INS1208970	Chr12	9037408	9037408	9146499	9146618	120
G46_G630_INS1209790	Chr12	9037408	9037408	9049465	9049584	120
G46_G8_INS1208710	Chr12	9037408	9037408	9189050	9189169	120
G46_HZ_INS1208330	Chr12	9037408	9037408	9073289	9073408	120
G46_II32_INS1206420	Chr12	9037408	9037408	8971710	8971829	120
G46_IR64_INS1208310	Chr12	9037408	9037408	9035879	9035998	120
G46_J4155_INS1209670	Chr12	9037408	9037408	9311146	9311265	120
G46_J4155S_INS1209920	Chr12	9037408	9037408	9278652	9278771	120
G46_Kosh_INS1217730	Chr12	9037408	9037408	9198652	9198771	120
G46_KY131_INS1217850	Chr12	9037408	9037408	9089299	9089418	120
G46_Lemont_INS1217420	Chr12	9037408	9037408	9279331	9279450	120
G46_NamRoo_INS1214890	Chr12	9037408	9037408	9322357	9322476	120
G46_Nipponbare_INS1217730	Chr12	9037408	9037408	9808874	9808993	120
G46_R498_INS1209180	Chr12	9037408	9037408	8671691	8671808	118
G46_R527_INS1208180	Chr12	9037408	9037408	8965198	8965317	120
G46_R9311_INS1206800	Chr12	9037408	9037408	9074666	9074785	120
G46_S548_INS1208390	Chr12	9037408	9037408	9193308	9193427	120
G46_TM_INS1211050	Chr12	9037408	9037408	9114755	9114874	120
G46_Tumba_INS1206580	Chr12	9037408	9037408	9378226	9378345	120
G46_WSSM_INS1209700	Chr12	9037408	9037408	9013778	9013897	120
G46_Y3551_INS1207910	Chr12	9037408	9037408	8813720	8813839	120
G46_Y58S_INS1209210	Chr12	9037408	9037408	9272419	9272538	120
G46_ZH11_INS1217850	Chr12	9037408	9037408	9160219	9160338	120
G46_OglaRS2_INS1220490	Chr12	9037408	9037408	8571693	8571812	120
G46_MH63RS3_INS1208010	Chr12	9037408	9037408	8817754	8817873	120

>G46_J4155S_INS1209920
AAATGCACACAAACAGGTGGCGCATAGTAATAGACACACATACAGGGGCATCAGTTTTGCAATCCAGTGCACTAGAATTGACTGATAGATATTTTACATCGGATTAACATAGCATACATT