Variation ID: G46_02428_DEL1118660

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-1A: G46 | G46
Os GJ-temp: 02428 | 02428
Chr11
13056872
13059625
SV Length:
Query Start:
Query End:
Allele sv Count:
2748 bp
12104462
12107209
24
There is no gene in this region.
SV_id Chromosome ref_start ref_end query_start query_end length
G46_02428_DEL1118660 Chr11 13056872 13059625 12104462 12107209 2748
G46_117534_DEL1116240 Chr11 13056872 13061270 12618846 12623250 4405
G46_127742_DEL1119060 Chr11 13056872 13061270 13271141 13275545 4405
G46_D62_DEL1111060 Chr11 13056872 13061270 12174892 12179281 4390
G46_FH838_DEL1110440 Chr11 13056872 13082624 14210126 14235871 25746
G46_G630_DEL1119620 Chr11 13056872 13061270 13529537 13533940 4404
G46_HZ_DEL1110830 Chr11 13056872 13330923 12784271 13301730 517460
G46_J4155S_DEL1112440 Chr11 13056872 13330923 12744699 13316009 571311
G46_Kosh_DEL1122870 Chr11 13056872 13061270 11756308 11760700 4393
G46_Lemont_DEL1125820 Chr11 13056872 13061270 12038303 12042693 4391
G46_LJ_DEL1122400 Chr11 13056872 13061270 11849613 11854004 4392
G46_LK638S_DEL1112320 Chr11 13056872 13330923 12780122 13348056 567935
G46_NamRoo_DEL1125370 Chr11 13056872 13061270 11705071 11709468 4398
G46_Nipponbare_DEL1122890 Chr11 13056872 13061270 12068959 12073352 4394
G46_R498_DEL1116510 Chr11 13056872 13061270 13022699 13027103 4405
G46_R527_DEL1118230 Chr11 13056872 13061270 13317937 13322341 4405
G46_R9311_DEL1120360 Chr11 13056872 13061270 13627625 13632033 4409
G46_S548_DEL1116550 Chr11 13056872 13061270 13223912 13228316 4405
G46_Tumba_DEL1116680 Chr11 13056872 13061270 13055090 13059491 4402
G46_XL628S_DEL1111390 Chr11 13056872 13330923 12773331 13342131 568801
G46_YX1_DEL1117980 Chr11 13056872 13061270 12793870 12798273 4404
G46_ZS97RS3_DEL1106790 Chr11 13056872 13322820 12926486 13448820 522335
G46_OglaRS2_DEL1130940 Chr11 13056872 13057665 11730714 11731506 793
G46_MH63RS3_DEL1120190 Chr11 13056872 13061270 13302702 13307106 4405

>G46_02428_DEL1118660
TGATGAACCCTGAGTTCCTCTCAACACTCAAGGCTGTTGTTGGCCCGATCTTTTGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGTGCAGATCAACCCTATTCCTGCAAGCAAATTGAAGAAACAAGCAAGAACAAGAATAAAGCAATCTGATATTGCAAATAGTAATTTAATACAAATGATAAGTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGTGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAACCCAAAAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACCAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAAGAAACTTACAAGCCCATTGGCCCAATACAGGAGACGCAGCACCTTGCTTTGTGATTGCGGCCAAACGAGATAGATTTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTCGAGAACTTTCCGTCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCGGCCGTTTGAAGTCAGCAATGTAACACGTGGCTGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGTAATGGTCGTATCCATAGTAGCCATGGTCACATCATCCTCCCCTTCTTCACAGAAAACCGTCCTCGGTTTTTCCATATGGTGCTCTTCGCGCAGTCCACTGAAAACAACCTATTTCTTGCAATCAAAACAAGACAAACTCGAGACAATATGATTAGCAGTAACATGTCTCTCTAGCTTGCATATTTTATCCGGAACTACAAGATGTTCTAAATCTGAACAAATGTAAACTCTATGCACCAAAAATATTCCTCTATCATTATATTCGCCAAAGATATGAAAAATAGCATTAGTTGGACATGGCAAATCAGATTTAGCAAATAATTTCTCCTTCAAATTATCGAGCTCACAAAAATCATCAAACTGAACATAGCCCAAAGTATTTAAAGAAGATAGCAATTCGTGTTCCTCTACTTCATTAGCAATGTGAACAACATGCTTAGAATCAGCACACAAAGAAATAGTAGAACTAACATGTTCATTCACTAGTTGTGGCATGGATATAAGTGAAACATTATCACACAACTCTTCTTTATCACAAGGAACAGCAAGTAAATCAACTTGTGACAAAGGCAACTCAGTAATTGATTCCACTAATGGTTGATCTACTATAGCATGAAAAGTGGACAAGTGTAGCTCACCTTGAGAATACTCACCTTCATTTCTCTCAGCACCATTTAATTTACCTTGCGAACTTTCTTCAGATAATGTAGCTGCATCAGCCTTCTCCTCATTCGCGAGTGATGGAAGTGACATCTCAAAATATCGTTCTTCTCATTTTGGAGACTTTTCTGAACTTCCTGCAAAACATCAGTGATAGGAGGCACAAGCATATCTTGTTGCTCCATTGGATTCTCCAAAATTTTGCGCTCAACAATGCAAGCAAGCATGAACAATTGGCCTATATGATTATATGTCACATTAACAAGCCCAGCCTGAATATTGAAATTAAGCCCTCTGAAAAATCTAGTCATTGTGTTCTCATTTGATTCTTGTAAACCACTATAAGTGATACAAATTTTAAAATCATGAAAGTACTCCCTAACAGTTTTGTCACATTGTTTTAGATGTTCCCATTTCTCAAGGAGAGCACGTCTATAGTATGAAAACACAAATCTTTTTCTCATCAGTATTTTGCATTCATCCCAAGTTTCAAGCTTATTCCCCACAGTATGCCACCAAAAAGATGCAGAACCGGTACACTTATTACTAGCAGCCTTAATCATTTGAGCATTAGAAAAATCATACTCATCAAATTGTTTTTCTACTGCTAGCTCCCAATTAATGTATGCAGCGGAATCATACTTTTCATCATAGACTGGTAACTTACATGCAACTTGTGCAAAATTATAGTCATGTACCTCATATGCATCACGTGAAGAAGTCGTCATATCTCGTCGAAGGTGTAGATGTTGACGTGAGCATGACCATCCTGTTTCCCCTTGCGCAATCCTGCCATGGTTAGCAGCAAACAAGAAACATACACAAGAATATACACGCTCCTATCAACTACTAGGTACTGGCAGCTCAAATCTCACACACACTCAAGCTTTTAACCAAGCTCTTACAAGATCTTACCAATGCAAGTGGAATGGTGATGTACACCGACTCAACCAAGCACCCCAATAGAGGTTGGATATATCGATGCCTCGGTAAACACTTGCTGTACGGCTGCAATCAAATCTGTGGAGCTCTGGGTAGGCTTAAATATGTAGCAAAGGAATAGCAAATGCTCAAATCAGAGAACGCAAAGTTGAATAATTGTTCAAAGTCAAGTACCGTGCTGGTCCTAGGCTAGAACGTACTAAAGACGCGAGCCTAGACACAAACGGTACCACAAAATAGCACCAGAAACAACTCAAGCACACTCTGATGTATGAAGTTCAGCTCAAACAAAACAATATTTTCTCTTTTCTTTCTTTCTTCTTCTTCTTTTCTTTTTTTTTCCTTTTCTTTCTGATTTTTTTTGTGCGGCTTTTTTTTTTCTTTTTTTTA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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