Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: FS32_YX1_INS1115330

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr11

12628927

SV Length:

Query Start:

Query End:

Allele sv Count:

333 bp

12888813

12889145

31

Gene_id	Chromosome	Start	End
OsYX1G1130134100.01	Chr11	12886565	12893530

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
FS32_117534_INS1117780	Chr11	12628927	12628927	12715081	12715413	333
FS32_125619_INS1111870	Chr11	12628927	12628927	12682497	12682165	333
FS32_125827_INS1114930	Chr11	12628927	12628927	13688045	13688377	333
FS32_127564_INS1115830	Chr11	12628927	12628927	12542506	12542174	333
FS32_127652_INS1119630	Chr11	12628927	12628927	12514874	12514542	333
FS32_127742_INS1115980	Chr11	12628927	12628927	13367349	13367681	333
FS32_132424_INS1113390	Chr11	12628927	12628927	12599577	12599245	333
FS32_CN1_INS1108330	Chr11	12628927	12628927	14184371	14184703	333
FS32_DG_INS1108620	Chr11	12628927	12628927	14771557	14771889	333
FS32_FH838_INS1114750	Chr11	12628927	12628927	14374408	14374740	333
FS32_G46_INS1110770	Chr11	12628927	12628927	13222795	13223127	333
FS32_G630_INS1117110	Chr11	12628927	12628927	13625735	13626067	333
FS32_G8_INS1111680	Chr11	12628927	12628927	12706738	12707070	333
FS32_HZ_INS1113210	Chr11	12628927	12628927	13135737	13135405	333
FS32_II32_INS1109450	Chr11	12628927	12628927	14243828	14243496	333
FS32_IR64_INS1113990	Chr11	12628927	12628927	12715272	12715604	333
FS32_J4155_INS1113630	Chr11	12628927	12628927	12499255	12498923	333
FS32_J4155S_INS1113590	Chr11	12628927	12628927	13149976	13149644	333
FS32_LK638S_INS1112880	Chr11	12628927	12628927	13182026	13181694	333
FS32_R498_INS1115660	Chr11	12628927	12628927	13118906	13119238	333
FS32_R9311_INS1117050	Chr11	12628927	12628927	13297371	13297703	333
FS32_S548_INS1114290	Chr11	12628927	12628927	13320119	13320451	333
FS32_TM_INS1115310	Chr11	12628927	12628927	14098499	14098831	333
FS32_Tumba_INS1114640	Chr11	12628927	12628927	13151286	13151618	333
FS32_WSSM_INS1114970	Chr11	12628927	12628927	12924095	12924427	333
FS32_XL628S_INS1112640	Chr11	12628927	12628927	13176114	13175782	333
FS32_Y3551_INS1115810	Chr11	12628927	12628927	12995459	12995127	333
FS32_Y58S_INS1121570	Chr11	12628927	12628927	13881967	13881635	333
FS32_YX1_INS1115330	Chr11	12628927	12628927	12888813	12889145	333
FS32_ZS97RS3_INS1109500	Chr11	12628927	12628927	13282788	13282456	333
FS32_MH63RS3_INS1117730	Chr11	12628927	12628927	13398919	13399251	333

>FS32_YX1_INS1115330
TTTGTAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTAATAGCAGTTATGCTTCTCAAAATCATTTTTTGTACTTCTTTTTCTCTGTTGTAGCATGATCTTTCAGATTGCCCTACATAATGTTTATTTTTTATACCTATAGCCATATTGATTACTTCAGATTTGACATGGAAAAATGTGAAATATTTAAAAGAACTCAGATTCAGTCAGAACTATTGTGTAAGCATGCATAGAAAGCTACCCTAAATAGACTTGATGCCCATTTGTCAAGTACAGCCTACATGTGAAGTAATCTAATACAAGCAGTT

Variation ID: FS32_YX1_INS1115330

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-1A: FS32 | FS32

Os XI-adm: YX1 | YX1

Chr11

12628927

12628927

SV Length:

Query Start:

Query End:

Allele sv Count:

333 bp

12888813

12889145

31