Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: DHX2_MH63RS3_INS1248360

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-temp: DHX2 | DHX2

Os XI-adm: Minghui 63 | MH63RS3

Chr12

25138821

25141003

SV Length:

Query Start:

Query End:

Allele sv Count:

1400 bp

5558422

5559821

40

Gene_id	Chromosome	Start	End
OsMH63_12G0088800	Chr12	5558496	5560057

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
DHX2_117425_INS1237920	Chr12	25138821	25141003	5738198	5740376	2179
DHX2_125619_INS1254010	Chr12	25138821	25141003	5667964	5670140	2177
DHX2_125827_INS1248190	Chr12	25138821	25141003	5610858	5613040	2183
DHX2_127518_INS1250500	Chr12	25138821	25141003	5749133	5751313	2181
DHX2_127564_INS1245470	Chr12	25138821	25141003	5683749	5685929	2181
DHX2_127652_INS1251140	Chr12	25138821	25140921	5710019	5712117	2099
DHX2_127742_INS1254620	Chr12	25138821	25141003	5642314	5644494	2181
DHX2_127742_INS1254620_1	Chr12	25138821	25141003	11513223	11515403	2181
DHX2_132424_INS1244310	Chr12	25138821	25141003	5605229	5607409	2181
DHX2_Basmati1_INS1241730	Chr12	25138821	25141003	5734197	5736375	2179
DHX2_D62_INS1249450	Chr12	25138821	25141003	5710260	5712440	2181
DHX2_FH838_INS1247550	Chr12	25138821	25141003	5554857	5556256	1400
DHX2_FS32_INS1250640	Chr12	25138821	25141003	5635430	5637610	2181
DHX2_G630_INS1247320	Chr12	25138821	25141003	5645805	5647985	2181
DHX2_G8_INS1247950	Chr12	25138821	25140992	5624440	5626607	2168
DHX2_HZ_INS1245620	Chr12	25138821	25141003	5628043	5630223	2181
DHX2_II32_INS1254410	Chr12	25138821	25141003	5631486	5633666	2181
DHX2_II32_INS1254410_1	Chr12	25138821	25141003	11495855	11498036	2182
DHX2_IR64_INS1248420	Chr12	25138821	25141003	5603510	5605690	2181
DHX2_J4155_INS1244940	Chr12	25138821	25141003	5774513	5776693	2181
DHX2_J4155S_INS1245310	Chr12	25138821	25141003	5775369	5777549	2181
DHX2_LK638S_INS1251550	Chr12	25138821	25141003	5607717	5609116	1400
DHX2_Nipponbare_INS1222550	Chr12	25138821	25141003	6119847	6121246	1400
DHX2_R498_INS1253110	Chr12	25138821	25141003	5569816	5571215	1400
DHX2_R498_INS1253110_1	Chr12	25138821	25141003	11145430	11147610	2181
DHX2_R527_INS1246530	Chr12	25138821	25141003	5576532	5578712	2181
DHX2_R9311_INS1254930	Chr12	25138821	25141003	5732494	5734674	2181
DHX2_R9311_INS1254930_1	Chr12	25138821	25141003	11601324	11603504	2181
DHX2_S548_INS1245760	Chr12	25138821	25141003	5575918	5578098	2181
DHX2_TM_INS1243640	Chr12	25138821	25141003	5605018	5607198	2181
DHX2_Tumba_INS1253930	Chr12	25138821	25141003	5594870	5597047	2178
DHX2_Tumba_INS1253930_1	Chr12	25138821	25141003	11921050	11923230	2181
DHX2_WSSM_INS1243740	Chr12	25138821	25140921	5587732	5589830	2099
DHX2_XL628S_INS1252800	Chr12	25138821	25141003	5599773	5601172	1400
DHX2_Y3551_INS1247620	Chr12	25138821	25141003	5555180	5556579	1400
DHX2_Y58S_INS1241620	Chr12	25138821	25141003	5769961	5772141	2181
DHX2_YX1_INS1257870	Chr12	25138821	25141003	6266356	6268536	2181
DHX2_YX1_INS1257870_1	Chr12	25138821	25141003	12087793	12089973	2181
DHX2_ZS97RS3_INS1250500	Chr12	25138821	25141003	5577089	5578488	1400
DHX2_MH63RS3_INS1248360	Chr12	25138821	25141003	5558422	5559821	1400

>DHX2_MH63RS3_INS1248360
CTGTAACGCCCCAGGTAACCACGTAGCTAGAGTGCCACATCAAACATACACTCAAACCACTAACTCCCAAAATTATTAGAAATTTCGGCAGAGTCTCCCCTGTAAATACGGACATCCACGACAGGCAATTATAAGTTAAACTAATAACAGTATCATTCCCACAATACGATCCATCCTTATAATCCATGGGGAAGAAACTATTAGAAATCTAAAAGATTATTACAAGACCGAACCATGATATAATTTAAGTATCATTATGGACCTAAGCAATATAGTTTGATAGTGTGCAGATAAATGTGTATATAAGGGTGCTACTTCCCGCCCATGCATGTCGATCTCAATATGTACCTAAAACCAAATAAAACACAAGAGTGAGTATAAAAATACTCAGCAAGTACAATATGGAACTAGAAAACATATATACACACCATTGGCAATAAAGTATAAACAGAAGGCTTTCTTTCTTTGATAGGAAACATATTTTCAAACACCAAGTCAAAGAAGATAGTAGTTCCCATCCGGGGGAGGCATGAATTGAAATAGTAGTTTCCATCCCAGACAATAGTGAATACATCCTAGCATTTGCCGGCAAAGCCGAGTAAGCGTGATCAGCGCTTACCCACAGGAACTTGAATAAAGAACCAAATTGCATTCCCATGACTACGCATGGTACTTTCATTGAAACCAGAATCAAAGAACCAAATTGAAACCATATTGCACATTTATGGCAAACAAGGAACTTGAATTATTTACCCAGAACAAGAATCCGGAATATTGAAAGAAGAATAACATCGTAAACATAGGATAAATATGGAAACCTAAATGGCGCGAACAACAATATGAATATAAGCGGTCACATGTCACATAGAAATATATCGGAAATAAATAGATAGAGCAAACAATCCATCAATCACACACTTAGTTCATCATGCACTTGCCTCCAATGAAGGTTTGGTATCATGCACGATCTGAAGGACCACCACCTAGGGTTTCTTTAGAGAACTTGTGAGGAGACAATAGGGGAGACTCTGATCTAACCCCTCCTTTTACTCCTCTCCTCCTCCTCGTTCCGTTTTTCTATTTCGCTTTTCGATCCAAGCTATGAAGGTGGAGATCTAGGGAGGGCAATTTGTTGTAGAGAGGAGAGATGTGAACATAGGAGAAGGGGAGGAAGGAGGCGCCGGCCAGGGAGAGGGGTGGCGGCACTATGAGGGGAGGTGGGAGTCGGTTCCCCTCTCTCTTGGTTTTAGGGAGAACTAATGGGCTGGATTTATGGGCCTTCTCATGTTGGCCCACTTCTAAAGATATTTTTCTTTTATTTATTTGTGTTAACATCTTTATTTTAACAAGTCAACCCAAATTAAAAAAACTAAATATCTTTTAATATACGGGGTATTACA