Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: DG_J4155S_INS1210130

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-1A: DG | DG

Os XI-adm: Jing4155S | J4155S

Chr12

9170236

SV Length:

Query Start:

Query End:

Allele sv Count:

120 bp

9278652

9278771

38

Gene_id	Chromosome	Start	End
OsJ4155_12g0103300	Chr12	9274739	9280175

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
DG_02428_INS1218360	Chr12	9170236	9170236	9241274	9241393	120
DG_117425_INS1213090	Chr12	9170236	9170236	9278722	9278839	118
DG_125827_INS1210350	Chr12	9170236	9170236	9129776	9129895	120
DG_127564_INS1210760	Chr12	9170236	9170236	9069746	9069865	120
DG_127652_INS1212500	Chr12	9170236	9170236	9152889	9153006	118
DG_127742_INS1207450	Chr12	9170236	9170236	8985893	8986012	120
DG_128077_INS1217420	Chr12	9170236	9170236	9162612	9162731	120
DG_132278_INS1216500	Chr12	9170236	9170236	9729833	9729952	120
DG_132424_INS1209540	Chr12	9170236	9170236	9108452	9108571	120
DG_Basmati1_INS1214410	Chr12	9170236	9170236	9873506	9873623	118
DG_CN1_INS1208590	Chr12	9170236	9170236	9112402	9112521	120
DG_D62_INS1209220	Chr12	9170236	9170236	9220546	9220665	120
DG_DHX2_INS1218370	Chr12	9170236	9170236	9228198	9228317	120
DG_FH838_INS1207940	Chr12	9170236	9170236	8925854	8925973	120
DG_FS32_INS1209720	Chr12	9170236	9170236	9146499	9146618	120
DG_G630_INS1210500	Chr12	9170236	9170236	9049465	9049584	120
DG_G8_INS1208220	Chr12	9170236	9170236	9189050	9189169	120
DG_HZ_INS1208950	Chr12	9170236	9170236	9073289	9073408	120
DG_II32_INS1206880	Chr12	9170236	9170236	8971710	8971829	120
DG_IR64_INS1208840	Chr12	9170236	9170236	9035879	9035998	120
DG_J4155_INS1209830	Chr12	9170236	9170236	9311146	9311265	120
DG_J4155S_INS1210130	Chr12	9170236	9170236	9278652	9278771	120
DG_Kosh_INS1218350	Chr12	9170236	9170236	9198652	9198771	120
DG_Lemont_INS1218140	Chr12	9170236	9170236	9279331	9279450	120
DG_NamRoo_INS1216000	Chr12	9170236	9170236	9322357	9322476	120
DG_Nipponbare_INS1218100	Chr12	9170236	9170236	9808874	9808993	120
DG_R498_INS1208900	Chr12	9170236	9170236	8671691	8671808	118
DG_R527_INS1208520	Chr12	9170236	9170236	8965198	8965317	120
DG_R9311_INS1206470	Chr12	9170236	9170236	9074666	9074785	120
DG_S548_INS1208680	Chr12	9170236	9170236	9193308	9193427	120
DG_TM_INS1210600	Chr12	9170236	9170236	9114755	9114874	120
DG_Tumba_INS1206670	Chr12	9170236	9170236	9378226	9378345	120
DG_WSSM_INS1209720	Chr12	9170236	9170236	9013778	9013897	120
DG_Y3551_INS1207870	Chr12	9170236	9170236	8813720	8813839	120
DG_Y58S_INS1210030	Chr12	9170236	9170236	9272419	9272538	120
DG_ZH11_INS1218540	Chr12	9170236	9170236	9160219	9160338	120
DG_OglaRS2_INS1220980	Chr12	9170236	9170236	8571693	8571812	120
DG_MH63RS3_INS1207850	Chr12	9170236	9170236	8817754	8817873	120

>DG_J4155S_INS1210130
AAATGCACACAAACAGGTGGCGCATAGTAATAGACACACATACAGGGGCATCAGTTTTGCAATCCAGTGCACTAGAATTGACTGATAGATATTTTACATCGGATTAACATAGCATACATT