Variation ID: DG_J4155S_DEL0436130

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-1A: DG | DG
Os XI-adm: Jing4155S | J4155S
Chr04
14253813
14255720
SV Length:
Query Start:
Query End:
Allele sv Count:
1901 bp
27791828
27793728
38
Gene_id Chromosome Start End
OsJ4155_04g0277900 Chr04 27791735 27792720
OsJ4155_04g0278000 Chr04 27793212 27793362
SV_id Chromosome ref_start ref_end query_start query_end length
DG_02428_DEL0437370 Chr04 14253813 14255720 28075461 28077361 1901
DG_117425_DEL0428730 Chr04 14253813 14255720 26494687 26496587 1901
DG_125619_DEL0424230 Chr04 14253813 14255720 28681137 28683037 1901
DG_125827_DEL0419650 Chr04 14253813 14255772 29661846 29663796 1951
DG_127518_DEL0425930 Chr04 14253813 14255772 28884887 28886837 1951
DG_127564_DEL0420210 Chr04 14253813 14255772 29161011 29162961 1951
DG_127742_DEL0424800 Chr04 14253813 14255772 28914733 28916670 1938
DG_128077_DEL0435580 Chr04 14253813 14255720 26354606 26356506 1901
DG_132278_DEL0436920 Chr04 14253813 14255720 27559521 27561421 1901
DG_Azucena_DEL0435970 Chr04 14253813 14255720 26276915 26278815 1901
DG_Basmati1_DEL0434980 Chr04 14253813 14255720 26044443 26046343 1901
DG_CN1_DEL0421670 Chr04 14253813 14255772 28311983 28313933 1951
DG_D62_DEL0426810 Chr04 14253813 14255772 28344540 28346490 1951
DG_DHX2_DEL0439400 Chr04 14253813 14255720 26947672 26949572 1901
DG_G630_DEL0423880 Chr04 14253813 14255772 28926458 28928408 1951
DG_G8_DEL0422240 Chr04 14253813 14255772 28623945 28625882 1938
DG_HZ_DEL0425930 Chr04 14253813 14255772 29086400 29088337 1938
DG_IR64_DEL0418330 Chr04 14253813 14255772 27272258 27274195 1938
DG_J4155_DEL0434530 Chr04 14253813 14255720 27223923 27225823 1901
DG_J4155S_DEL0436130 Chr04 14253813 14255720 27791828 27793728 1901
DG_Kosh_DEL0440560 Chr04 14253813 14255720 27744207 27746107 1901
DG_Lemont_DEL0436800 Chr04 14253813 14255720 27076944 27078844 1901
DG_LJ_DEL0437880 Chr04 14253813 14255720 27075455 27077355 1901
DG_NamRoo_DEL0438790 Chr04 14253813 14255720 28031648 28033548 1901
DG_Nipponbare_DEL0440260 Chr04 14253813 14255720 27686717 27688617 1901
DG_R498_DEL0425880 Chr04 14253813 14255772 27806917 27808854 1938
DG_R527_DEL0426430 Chr04 14253813 14255772 28387578 28389515 1938
DG_R9311_DEL0424150 Chr04 14253813 14255772 28995439 28997376 1938
DG_S548_DEL0425900 Chr04 14253813 14255772 27868635 27870572 1938
DG_TM_DEL0418340 Chr04 14253813 14255772 27033252 27035202 1951
DG_Tumba_DEL0421110 Chr04 14253813 14255772 29354326 29356276 1951
DG_WSSM_DEL0425720 Chr04 14253813 14255772 28475655 28477592 1938
DG_Y3551_DEL0427330 Chr04 14253813 14255772 29148022 29149972 1951
DG_Y58S_DEL0427540 Chr04 14253813 14255720 28882633 28884533 1901
DG_YX1_DEL0422590 Chr04 14253813 14255772 27370313 27372250 1938
DG_ZH11_DEL0439240 Chr04 14253813 14255720 27233580 27235480 1901
DG_OglaRS2_DEL0445390 Chr04 14253813 14255772 24355235 24357160 1926
DG_MH63RS3_DEL0428040 Chr04 14253813 14255772 29407706 29409656 1951

>DG_J4155S_DEL0436130
CAAGGTCCAAGTGTACTGCTTCGAGGTCCTTTTATTCAATCAGTGCTTTTCGAGTTTTATGATTTATTCATGACAATACCAGCATGGACAACGTTCCGAGGGGAAAACCAGTCATTTTGATTTCTGACAGTGAAGATGGTAAACCAAATTCTTTTTCCTACTTATTCATGTCCTTTCTTCTTTGTTTCGAACTAAAATGGTGCTTACAAACCAAAAACACGGGAAATATTATTGTAGATGATGATGAAGTTGCTAAGATATATCAAAGCGTGCGCAAGTGCTCCATTGAAAGAGGTGATTATTTTCATATAAATAATTAATAAGTCCAAATGTACAGAATGTTAGGTACTGCTAGTCAGATGATGTGCTTGTCAAACTTCCAATTTCAGGTCAATATGGACCTCGCACCTTCCCTGGATTTGATAGGTAGTACTGGTATGGGACTGAACATGCAGTACAAAATTGCTCACATTGCTGTAAGCAATTTGCCTACCATTCCACTCTATGTGTATGAGATCCAGATGACTAATTTGACAAAAGGGAAAATGGTATGGTTCACAAATCTGACTGCCCTGTATTTGCATTTGTTTATACATAAATGTCCTGTGTCTAAATGTCTTGTTTATATTTTTTAGGCCTTCAGTTTGCCATTTAGCAAGCAGTACATAAACAACCACCTTTCAACACCAATTGATGATTTACTTGTGACTCTGGTTGGATCAGCTGAATCCTTTGAGATGAGACTGAAGAAATCCAAAGATAAGCGGGCTACCTTTACAACTAGATGGAACAAGTTGGTTCAAGCCAATTTATTCGAGCTTGGTGATGTTTGTGTGTTTCTGTTCACTGAAGTTGATGATGACCTATGTATTACTCTTGAGGTTCTCAACTAGTGTAATGGATGAAGAACTTTGATGTGCCCCCTCATAATGTAGTAGTATGCCCCCTCCTAGTGTAGTATCTGCACCTTATGTAATGGATACTATGCAGCAGCTTTTGTTCAACTTTAATGGAGGCCATGCAGCAGCTTATGTTCTAAGTTAAGACAATGTTATTCTGATGTAATATATTTATCATCTATTTCCCTAAAATTACCTAGTTGTTTGCATCACTTCAAATCTGATATGGCAAGTGTACAGTTTTTATGCTACTGGAGTTGTTGATTGTTGTTGGAATCACTGCTACAAAATTAAAATGGCTGCCCGTTCTGTTCTGAAAACTAAAAACATGCTACGGAAGCTTCATCTTGATTGTTGCTGGAATACTATACTTAATTGGGCTGAAAACACACAGAACAGAAGCAGCTGGCATGAATACAAATGAGTTTAAGAAACTTTAGTTGGCTGGAATACAAATGTAAGGTGCACACACAAGAGCGTCGGACGATGCAGGAACAACAGAGACCACAACAGCAGGAAGCGACGCCCGAGTATTCCGGCTGGATGCGACGGTGGATGCGGCAGGGTGGAGGCGGCGATTTTGATGCGCCTGGCGTCGTCGTGGATGAGTCGATGCGCCTGCGGATGGCTGGATGAGACAACGAGTTCTTGCGACGGCGGGATGGATGCGCCGGGGTGGAGGCTGCCGCTGTATGCGACGACGGGATGCGCCGCTATTGACGACGGGATGCGGGTTGGACGTCTGCCGCGGCGTCCTCGACGGCGGCAGACGCGTGTTCGACGCGCGGCCGCGGTGGCGTCGAGGGTACGTCGGCCGCGGGGGAATACCTGCGATGAGACGGCGGCTGCGGCGGACAAGATGAGACGCCGGCAACAGATATTGGCGCTTGGCGGCCGCCGCAGACTATTGGCTGGGATGGGCGGTGATTAACGCTACCCTAATTTGTTTAGCCCCATCATACCCTTCCTAAATCAACGGTCAGATTACATTGGTACCTCATG

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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