Variation ID: Basmati1_R498_INS1122830

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os cB: Basmati1 | Basmati1
Os XI-1B: R498 | R498
Chr11
12491578
12491578
SV Length:
Query Start:
Query End:
Allele sv Count:
333 bp
13119238
13118906
31
Gene_id Chromosome Start End
OsR498G1119923300.01 Chr11 13116657 13123148
SV_id Chromosome ref_start ref_end query_start query_end length
Basmati1_117534_INS1117370 Chr11 12491578 12491578 12715413 12715081 333
Basmati1_125619_INS1125000 Chr11 12491578 12491578 12682165 12682497 333
Basmati1_125827_INS1125900 Chr11 12491578 12491578 13688377 13688045 333
Basmati1_127564_INS1123390 Chr11 12491578 12491578 12542174 12542506 333
Basmati1_127652_INS1126910 Chr11 12491578 12491578 12514542 12514874 333
Basmati1_127742_INS1123100 Chr11 12491578 12491578 13367681 13367349 333
Basmati1_132424_INS1124790 Chr11 12491578 12491578 12599245 12599577 333
Basmati1_CN1_INS1124480 Chr11 12491578 12491578 14184703 14184371 333
Basmati1_DG_INS1124310 Chr11 12491578 12491578 14771889 14771557 333
Basmati1_FH838_INS1125850 Chr11 12491578 12491578 14374740 14374408 333
Basmati1_G46_INS1124490 Chr11 12491578 12491578 13223127 13222795 333
Basmati1_G630_INS1121990 Chr11 12491578 12491578 13626067 13625735 333
Basmati1_G8_INS1122470 Chr11 12491578 12491578 12707070 12706738 333
Basmati1_HZ_INS1126750 Chr11 12491578 12491578 13135405 13135737 333
Basmati1_II32_INS1122170 Chr11 12491578 12491578 14243496 14243828 333
Basmati1_IR64_INS1124750 Chr11 12491578 12491578 12715604 12715272 333
Basmati1_J4155_INS1122140 Chr11 12491578 12491578 12498923 12499255 333
Basmati1_J4155S_INS1124940 Chr11 12491578 12491578 13149644 13149976 333
Basmati1_R498_INS1122830 Chr11 12491578 12491578 13119238 13118906 333
Basmati1_R527_INS1123630 Chr11 12491578 12491578 13414478 13414146 333
Basmati1_R9311_INS1122720 Chr11 12491578 12491578 13297703 13297371 333
Basmati1_S548_INS1123280 Chr11 12491578 12491578 13320451 13320119 333
Basmati1_TM_INS1123260 Chr11 12491578 12491578 14098831 14098499 333
Basmati1_Tumba_INS1120640 Chr11 12491578 12491578 13151618 13151286 333
Basmati1_WSSM_INS1123530 Chr11 12491578 12491578 12924427 12924095 333
Basmati1_XL628S_INS1125300 Chr11 12491578 12491578 13175782 13176114 333
Basmati1_Y3551_INS1121990 Chr11 12491578 12491578 12995127 12995459 333
Basmati1_Y58S_INS1121040 Chr11 12491578 12491578 13881635 13881967 333
Basmati1_YX1_INS1122160 Chr11 12491578 12491578 12889145 12888813 333
Basmati1_ZS97RS3_INS1125100 Chr11 12491578 12491578 13282456 13282788 333
Basmati1_MH63RS3_INS1122520 Chr11 12491578 12491578 13399251 13398919 333

>Basmati1_R498_INS1122830
TTTGTAGGGAGTACCATCACTATTTTCTGATCTTAGCCCATTGTATGAGCAACCTGGCAAGGTAATAGCAGTTATGCTTCTCAAAATCATTTTTTGTACTTCTTTTTCTCTGTTGTAGCATGATCTTTCAGATTGCCCTACATAATGTTTATTTTTTATACCTATAGCCATATTGATTACTTCAGATTTGACATGGAAAAATGTGAAATATTTAAAAGAACTCAGATTCAGTCAGAACTATTGTGTAAGCATGCATAGAAAGCTACCCTAAATAGACTTGATGCCCATTTGTCAAGTACAGCCTACATGTGAAGTAATCTAATACAAGCAGTT

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.