Variation ID: 132424_Nipponbare_DEL0462350

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os XI-2A: GOBOL SAIL | Os132424RS1
Os GJ-temp: Nipponbare | IRGSP 1.0
Chr04
28776719
28777338
SV Length:
Query Start:
Query End:
Allele sv Count:
612 bp
27684195
27684806
27
Gene_id Chromosome Start End
LOC_Os04g46690 Chr04 27680026 27687609
SV_id Chromosome ref_start ref_end query_start query_end length
132424_125827_DEL0441530 Chr04 28776719 28779912 21599618 21602869 3252
132424_127742_DEL0439030 Chr04 28776719 28779912 20984532 20987779 3248
132424_Azucena_DEL0459790 Chr04 28776719 28780128 2603414 2606905 3492
132424_CN1_DEL0446920 Chr04 28776719 28779912 20377276 20380527 3252
132424_D62_DEL0440710 Chr04 28776719 28779912 20476302 20479550 3249
132424_DG_DEL0443950 Chr04 28776719 28779912 20818783 20822033 3251
132424_FS32_DEL0444120 Chr04 28776719 28779912 20426453 20429704 3252
132424_G46_DEL0445360 Chr04 28776719 28779912 19901910 19905158 3249
132424_G8_DEL0440940 Chr04 28776719 28779912 20701431 20704664 3234
132424_II32_DEL0441070 Chr04 28776719 28779912 20926889 20930139 3251
132424_J4155_DEL0454540 Chr04 28776719 28777338 27221401 27222012 612
132424_J4155S_DEL0457750 Chr04 28776719 28777338 27789306 27789917 612
132424_J4155S_DEL0457750_1 Chr04 28776719 28779912 19717342 19720594 3253
132424_KY131_DEL0462090 Chr04 28776719 28777338 28170261 28170872 612
132424_LK638S_DEL0442090 Chr04 28776719 28779912 20732580 20735831 3252
132424_NamRoo_DEL0461940 Chr04 28776719 28779212 31937512 31940026 2515
132424_Nipponbare_DEL0462350 Chr04 28776719 28777338 27684195 27684806 612
132424_R498_DEL0441920 Chr04 28776719 28779912 19983592 19986841 3250
132424_R527_DEL0442460 Chr04 28776719 28779912 20415059 20418309 3251
132424_R9311_DEL0437760 Chr04 28776719 28779912 21011638 21014886 3249
132424_TM_DEL0444970 Chr04 28776719 28779912 18983006 18986254 3249
132424_XL628S_DEL0442430 Chr04 28776719 28779912 20892958 20896209 3252
132424_Y3551_DEL0439590 Chr04 28776719 28779912 21265175 21268422 3248
132424_Y58S_DEL0443120 Chr04 28776719 28777338 28880111 28880722 612
132424_YX1_DEL0440780 Chr04 28776719 28779912 19489516 19492765 3250
132424_ZS97RS3_DEL0441100 Chr04 28776719 28779912 21237925 21241176 3252
132424_MH63RS3_DEL0440310 Chr04 28776719 28779912 21528561 21531811 3251

>132424_Nipponbare_DEL0462350
GGCCCGGGTGGCTGTTGAAAAGCTGTTGGCCGGGTGCCAACCTTGTTTCAAAATCTAAAGACTGATACATTGCACATACTCCGTTCGGACAAGACGCACTGTCTCATCCGTGTCGTTTGAGAAGCACTCACTTAGTTGTTTCAGAAAAGAGTTCAAATAAAATCAATTACGAAAACAACAGCCTTTCCTTGAAGCCTGCATTAAACACTTATTTCCCCTGGCTTGCTGAGTACTCCTGTACTCACCCTTGCTCTATATAAATAACCCCCCAGTTGCTGAAGAAGATGAAGCGGATCCTGCTGATGAAGAGTTCTTCCAGGAGTAAGCCGGCTTCGATGAGTTTTAGGGTTTCGGCCTAATTCCCAAGTCGCGCCTGTGATGTTTGGTCCAAGCCCTGGCTTCCGTTTCCCTTTTGTAATGCAGTTGTGAGCTCGGGATCTGTCCGCAGCCCAACATGACTGTACCTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTCCCTGTGATACCAGCACTGTTTTCCTGGGACTGGTATCGATTAACAGGTTAATTTGGAGCGTCACGGGCTAATTCCAGTCGGGACTAGCTCGGGGCGTGACA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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