Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 132278_Y3551_INS1120240

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-subtrp: CHAO MEO | Os132278RS1

Os XI-1B: Y3551 | Y3551

Chr11

11971959

SV Length:

Query Start:

Query End:

Allele sv Count:

333 bp

12995459

12995127

31

Gene_id	Chromosome	Start	End
OsY3551G1125153400.01	Chr11	12991331	12997706

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
132278_117534_INS1117190	Chr11	11971959	11971959	12715081	12715413	333
132278_125619_INS1122170	Chr11	11971959	11971959	12682497	12682165	333
132278_125827_INS1121900	Chr11	11971959	11971959	13688045	13688377	333
132278_127564_INS1121360	Chr11	11971959	11971959	12542506	12542174	333
132278_127652_INS1124280	Chr11	11971959	11971959	12514874	12514542	333
132278_127742_INS1123260	Chr11	11971959	11971959	13367349	13367681	333
132278_132424_INS1122030	Chr11	11971959	11971959	12599577	12599245	333
132278_CN1_INS1123170	Chr11	11971959	11971959	14184371	14184703	333
132278_DG_INS1122800	Chr11	11971959	11971959	14771557	14771889	333
132278_FH838_INS1124050	Chr11	11971959	11971959	14374408	14374740	333
132278_G46_INS1122740	Chr11	11971959	11971959	13222795	13223127	333
132278_G630_INS1122090	Chr11	11971959	11971959	13625735	13626067	333
132278_G8_INS1122250	Chr11	11971959	11971959	12706738	12707070	333
132278_HZ_INS1123280	Chr11	11971959	11971959	13135737	13135405	333
132278_IR64_INS1122100	Chr11	11971959	11971959	12715272	12715604	333
132278_J4155_INS1119850	Chr11	11971959	11971959	12499255	12498923	333
132278_J4155S_INS1122610	Chr11	11971959	11971959	13149976	13149644	333
132278_LK638S_INS1122610	Chr11	11971959	11971959	13182026	13181694	333
132278_R498_INS1121200	Chr11	11971959	11971959	13118906	13119238	333
132278_R527_INS1122310	Chr11	11971959	11971959	13414146	13414478	333
132278_R9311_INS1123630	Chr11	11971959	11971959	13297371	13297703	333
132278_S548_INS1122490	Chr11	11971959	11971959	13320119	13320451	333
132278_TM_INS1123190	Chr11	11971959	11971959	14098499	14098831	333
132278_Tumba_INS1121190	Chr11	11971959	11971959	13151286	13151618	333
132278_WSSM_INS1121060	Chr11	11971959	11971959	12924095	12924427	333
132278_XL628S_INS1123230	Chr11	11971959	11971959	13176114	13175782	333
132278_Y3551_INS1120240	Chr11	11971959	11971959	12995459	12995127	333
132278_Y58S_INS1118870	Chr11	11971959	11971959	13881967	13881635	333
132278_YX1_INS1122020	Chr11	11971959	11971959	12888813	12889145	333
132278_ZS97RS3_INS1124070	Chr11	11971959	11971959	13282788	13282456	333
132278_MH63RS3_INS1123650	Chr11	11971959	11971959	13398919	13399251	333

>132278_Y3551_INS1120240
AACTGCTTGTATTAGATTACTTCACATGTAGGCTGTACTTGACAAATGGGCATCAAGTCTATTTAGGGTAGCTTTCTATGCATGCTTACACAATAGTTCTGACTGAATCTGAGTTCTTTTAAATATTTCACATTTTTCCATGTCAAATCTGAAGTAATCAATATGGCTATAGGTATAAAAAATAAACATTATGTAGGGCAATCTGAAAGATCATGCTACAACAGAGAAAAAGAAGTACAAAAAATGATTTTGAGAAGCATAACTGCTATTACCTTGCCAGGTTGCTCATACAATGGGCTAAGATCAGAAAATAGTGATGGTACTCCCTACAAA