Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 128077_II32_INS0104290

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-trop2: KETAN NANGKA | Os128077RS1

Os XI-1A: II32 | II32

Chr01

3882002

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3865892

3866426

29

Gene_id	Chromosome	Start	End
OsII32G0100431100.01	Chr01	3863287	3866488

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
128077_125619_INS0105600	Chr01	3882002	3882002	3948220	3948754	535
128077_127518_INS0106470	Chr01	3882002	3882002	3962533	3963067	535
128077_127564_INS0105430	Chr01	3882002	3882002	3877806	3878340	535
128077_127742_INS0105440	Chr01	3882002	3882002	3964052	3964586	535
128077_132424_INS0105820	Chr01	3882002	3882002	3897289	3897823	535
128077_Basmati1_INS0105320	Chr01	3882002	3882002	3913736	3914270	535
128077_D62_INS0105940	Chr01	3882002	3882002	3736873	3737407	535
128077_DG_INS0106100	Chr01	3882002	3882002	3730108	3730642	535
128077_FH838_INS0105060	Chr01	3882002	3882002	4231288	4231822	535
128077_FS32_INS0104480	Chr01	3882002	3882002	3879806	3880340	535
128077_G630_INS0105090	Chr01	3882002	3882002	3942339	3942873	535
128077_G8_INS0105250	Chr01	3882002	3882002	3966034	3966568	535
128077_HZ_INS0105200	Chr01	3882002	3882002	3973037	3973571	535
128077_II32_INS0104290	Chr01	3882002	3882002	3865892	3866426	535
128077_IR64_INS0106020	Chr01	3882002	3882002	3845676	3846210	535
128077_J4155_INS0104500	Chr01	3882002	3882002	3958666	3959200	535
128077_J4155S_INS0104540	Chr01	3882002	3882002	3971710	3972244	535
128077_LK638S_INS0104720	Chr01	3882002	3882002	4078992	4079526	535
128077_R527_INS0105590	Chr01	3882002	3882002	3957957	3958491	535
128077_R9311_INS0105930	Chr01	3882002	3882002	3958207	3958741	535
128077_S548_INS0105210	Chr01	3882002	3882002	3965902	3966436	535
128077_Tumba_INS0105370	Chr01	3882002	3882002	3872026	3872560	535
128077_WSSM_INS0105100	Chr01	3882002	3882002	3962184	3962718	535
128077_XL628S_INS0105810	Chr01	3882002	3882002	3861680	3862214	535
128077_Y3551_INS0105120	Chr01	3882002	3882002	3942328	3942862	535
128077_Y58S_INS0104440	Chr01	3882002	3882002	3959032	3959566	535
128077_YX1_INS0104290	Chr01	3882002	3882002	3866459	3866993	535
128077_ZS97RS3_INS0104300	Chr01	3882002	3882002	3876430	3876964	535
128077_MH63RS3_INS0105060	Chr01	3882002	3882002	3948257	3948791	535

>128077_II32_INS0104290
GGCCTGTTTGGTTGGCAACCTGAGTGATGTGCCTAAGAAAACTACATGCCTAAGAGGCATTAGCTATCCTGTCAAAACTTGCCTGATGAGGCTAGCCTGAGCAAATGTTGTTTGGTTAGTAGCCTAAGCCTGAGGAAACTAAATTGAGATTAGATGGTTCATAATTACATGGTTAAGGTAGATATTATTTAAATAAAACGGTATCTTATATCCTAATCTATCGCATATAAGCAAATGTTGTATTTTCGGTTCGTTTGCACCAACCAAGATTCAACAATAAAATATTCCAACACCTTTTGCATGCACAGTCGTGGGCCCGTGACAGGACAAGCTTGATTAGCGCGTTTTGTTTTGTGTAACTAGACTGAGCCAGGCGCTCGTTTTTGGTGGCCTGAGCTAGGCTAATGAACCTATCAGGTTTTTCAGGTCAGGCAGAGAATGAAACCATCAGGCTACCAACCAAACGACACAGGATATCCCTCAGGGACATATCAGGCCAGGCTCTTTTGGCTCAGGGCTTCAACCAAACAGCCCC