Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 125827_S548_DEL0437910

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Os XI-3B2: LIU XU | Os125827RS1

Os XI-1B: S548 | S548

Chr04

33752960

33753241

SV Length:

Query Start:

Query End:

Allele sv Count:

284 bp

27864659

27864942

7 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
125827_127742_DEL0436390	Chr04	33752960	33753241	28910757	28911040	284
125827_D62_DEL0433530	Chr04	33752960	33753241	28340582	28340865	284
125827_G8_DEL0435080	Chr04	33752960	33753241	28619971	28620254	284
125827_HZ_DEL0436510	Chr04	33752960	33753241	29082424	29082707	284
125827_R498_DEL0437400	Chr04	33752960	33753241	27802941	27803224	284
125827_R527_DEL0437810	Chr04	33752960	33753241	28383602	28383885	284
125827_S548_DEL0437910	Chr04	33752960	33753241	27864659	27864942	284

>125827_S548_DEL0437910
TGTAGCGCCCGTTCCGTCGTGGCGCCTAGCGGGAAAATTATCTCTTAAAAACCCTAATTGCGAAATTTGTTTCTTTGCTTGTTGTCTAGTGTCCGTGCCATCTCAAGATCTCAAATCCCCGATATATCGTCGAGTTCAATTCCGAATCTAAATCCTTCCAAATCAAATCCCTCCGCAAAAGTCTATTTTGCCTCCCCCGGGGTCGATGGGCCGAATCTCTTTCGGCCCATCTCCCCCTCCCTCTCGGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTC