Variation ID: 117534_MH63RS3_DEL1112620

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
DEL
Os cA1: N22 | OsN22RS2
Os XI-adm: Minghui 63 | MH63RS3
Chr11
10978177
10978970
SV Length:
Query Start:
Query End:
Allele sv Count:
794 bp
13302702
13303495
37
Gene_id Chromosome Start End
OsMH63_11G0185400 Chr11 13303485 13304917
SV_id Chromosome ref_start ref_end query_start query_end length
117534_02428_DEL1114200 Chr11 10978177 10978970 12772439 12773231 793
117534_117425_DEL1113280 Chr11 10978177 10978970 12237630 12238422 793
117534_125619_DEL1112360 Chr11 10978177 10978970 13323883 13324675 793
117534_125827_DEL1114300 Chr11 10978177 10978970 13996118 13996911 794
117534_127652_DEL1114540 Chr11 10978177 10978970 13327715 13328508 794
117534_127742_DEL1112750 Chr11 10978177 10978970 13601294 13602087 794
117534_128077_DEL1115180 Chr11 10978177 10978970 12861634 12862426 793
117534_132278_DEL1113840 Chr11 10978177 10978970 12322098 12322890 793
117534_Azucena_DEL1114320 Chr11 10978177 10978970 12835892 12836684 793
117534_Basmati1_DEL1112970 Chr11 10978177 10978970 13314464 13315256 793
117534_D62_DEL1111430 Chr11 10978177 10978970 12174892 12175686 795
117534_DG_DEL1112490 Chr11 10978177 10978970 15083535 15084328 794
117534_FH838_DEL1114360 Chr11 10978177 10978970 15082589 15083382 794
117534_FS32_DEL1112110 Chr11 10978177 10978970 13503236 13504028 793
117534_G46_DEL1113380 Chr11 10978177 10978970 13905988 13906781 794
117534_G630_DEL1113330 Chr11 10978177 10978970 13243691 13244484 794
117534_G8_DEL1113440 Chr11 10978177 10978970 13268649 13269442 794
117534_HZ_DEL1113670 Chr11 10978177 10978970 13838807 13839600 794
117534_II32_DEL1111970 Chr11 10978177 10978970 13249677 13250470 794
117534_IR64_DEL1112910 Chr11 10978177 10978970 12877082 12877875 794
117534_J4155_DEL1113090 Chr11 10978177 10978970 13051573 13052366 794
117534_J4155S_DEL1113180 Chr11 10978177 10978970 13859211 13860004 794
117534_Lemont_DEL1115770 Chr11 10978177 10978970 12895622 12896414 793
117534_LK638S_DEL1113890 Chr11 10978177 10978970 13891253 13892046 794
117534_NamRoo_DEL1114980 Chr11 10978177 10978970 16398855 16399648 794
117534_R498_DEL1112710 Chr11 10978177 10978970 13022699 13023492 794
117534_R527_DEL1113320 Chr11 10978177 10978970 13317937 13318730 794
117534_R9311_DEL1113140 Chr11 10978177 10978970 13562828 13563621 794
117534_TM_DEL1112360 Chr11 10978177 10978970 13431170 13431963 794
117534_Tumba_DEL1111840 Chr11 10978177 10978970 12806346 12807139 794
117534_WSSM_DEL1115800 Chr11 10978177 10978970 13097388 13098181 794
117534_XL628S_DEL1113240 Chr11 10978177 10978970 13885322 13886115 794
117534_Y3551_DEL1112870 Chr11 10978177 10978970 13090862 13091655 794
117534_Y58S_DEL1116290 Chr11 10978177 10978970 13977380 13978173 794
117534_ZS97RS3_DEL1112230 Chr11 10978177 10978970 13841292 13842085 794
117534_OglaRS2_DEL1122800 Chr11 10978177 10978968 11730714 11731506 793
117534_MH63RS3_DEL1112620 Chr11 10978177 10978970 13302702 13303495 794

>117534_MH63RS3_DEL1112620
TGATGAACCCTGAGTTCCTCCCGACACTCAAGGCTGTTGTTGGCCCGATCTTTCGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACAATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGTGCAGATCAACCCTATTCCTGCAAGCAAATCGAAGAAACAAGCAAGAACAAGATAAAAGCAATCTGATATTGCAAATAGGAATTTAATACGAATGATAAGTTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAACCCAAGAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACCAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAACAAAGTTACAAGCCCATTGGCCCAATACAGGTGACGCAACACCTTGCTTCTGTGATTGCGGCCAAACAAGATAGAATTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTCGAGAGCTTTCCATCAAGTACTCACGGGCGCAAAACGGAGCACGTATGTAGATTTTGCGACCGTTTGAAGTCAGCAATGTAACACGTGGCCGAATCAGATTGCAGCACATGGAAGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGCAATGGTCGTATCCATAGTAGCCATGGTCACATCATC

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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