Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsMH63_11G0185400 OGI:11045400 | 17/50 Minghui 63 | MH63RS3 | HZAU Chr11:13303486-13304917
Gene Symbol -
Mutant -
Stuctural Variations

NamRoo_MH63RS3_DEL1121110,02428_MH63RS3_DEL1121830,02428_MH63RS3_DEL1117320,Basmati1_MH63RS3_INS1122600,Basmati1_MH63RS3_INV1120490,Y58S_MH63RS3_INV1115260,Lemont_MH63RS3_DEL1122010,Lemont_MH63RS3_DEL1125000,128077_MH63RS3_DEL1122490,128077_MH63RS3_DEL1120360,128077_MH63RS3_DEL1122790,127652_MH63RS3_DEL1117300,127652_MH63RS3_DEL1128270,127652_MH63RS3_INS1125150,127652_MH63RS3_DEL1126300,127652_MH63RS3_DEL1144640,127652_MH63RS3_INV1124580,CN1_MH63RS3_INS1123070_1,Y3551_MH63RS3_INV1102810_1,ZH11_MH63RS3_INS1119980,DG_MH63RS3_TRA1146220,DG_MH63RS3_INS1146240,DHX2_MH63RS3_DEL1120160,DHX2_MH63RS3_DEL1120090,DHX2_MH63RS3_DEL1120410,127518_MH63RS3_DEL1114690,127518_MH63RS3_DEL1118730,127518_MH63RS3_DEL1117880,KY131_MH63RS3_INS1121950,XL628S_MH63RS3_INS1123390,XL628S_MH63RS3_DEL1144210,XL628S_MH63RS3_DEL1148250_2,XL628S_MH63RS3_INV1123120,IR64_MH63RS3_INS1115090_1,HZ_MH63RS3_INS1121370,HZ_MH63RS3_INV1121080,125619_MH63RS3_INS1117570,125619_MH63RS3_DEL1142100_1,125619_MH63RS3_INV1117220_1,Tumba_MH63RS3_DEL1121830,Kosh_MH63RS3_DEL1118320,132424_MH63RS3_INS1116590,132424_MH63RS3_INV1116240,WSSM_MH63RS3_INS1120420,LK638S_MH63RS3_INS1122410,LK638S_MH63RS3_INV1122080_2,G8_MH63RS3_INS1113490,TM_MH63RS3_DEL1120520,TM_MH63RS3_OTH1120560,127564_MH63RS3_INS1115600,127564_MH63RS3_INV1114390,117534_MH63RS3_DEL1112620,J4155S_MH63RS3_INS1119570,J4155S_MH63RS3_DEL1144260_8,J4155S_MH63RS3_INV1119090,ZS97RS3_MH63RS3_INS1122410,ZS97RS3_MH63RS3_DEL1141190,ZS97RS3_MH63RS3_DEL1145130_2,ZS97RS3_MH63RS3_INV1121870,132278_MH63RS3_DEL1123220,132278_MH63RS3_INS1119190,132278_MH63RS3_DEL1123560,II32_MH63RS3_OTH1115260,II32_MH63RS3_INV1115210,G46_MH63RS3_INS1118610,G46_MH63RS3_DEL1118780,G46_MH63RS3_DEL1120190,G46_MH63RS3_DEL1143750_2,G46_MH63RS3_TRA1118510,G46_MH63RS3_INS1118600,FS32_MH63RS3_DEL1117260,FS32_MH63RS3_DEL1117630,FS32_MH63RS3_DEL1137880_2,J4155_MH63RS3_INS1112720,J4155_MH63RS3_INV1112480,117425_MH63RS3_INS1119960,117425_MH63RS3_INV1118220,Azucena_MH63RS3_INS1122340,Azucena_MH63RS3_INV1121010_2,D62_MH63RS3_DEL1116830,D62_MH63RS3_TRA1135640_1,D62_MH63RS3_INS1135660,OglaRS2_MH63RS3_INS1127800_2,OglaRS2_MH63RS3_INS1139870,FH838_MH63RS3_INS1119340,Nipponbare_MH63RS3_INS1120680_3,125827_MH63RS3_INS1123570_1,LJ_MH63RS3_DEL1107030,LJ_MH63RS3_DEL1118660,

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DNA seq

TCACATCATCCTCCCCTTCTTCACAGAAAACCGTCCTCGGTTTTTCCATATGGTGCTCTTCGCGCAGTCCGCTGAAAACAACCTGTTTCTTGCAATCAAAACAAGACAAACTCGAGACAATATGATTAGCAGTAACATGTCTCTCTAGCTTGCATATTTTATCCGGAACTACAAGATGTTCTAAATCTGAACAAATGTAAACTCTATGCACCAAAAATATTCCTCTATCATTATATTCGCCAAAGATATGAAAAATAGCATTAGTTGGACATGGCAAATCAGATTTATCAAATAATTTCTCCTTCAAATTATCGAGCTCACAAAAATCATCAAACTGAACATAGCCCAAAGTATTTAAAGAAGATAGCAATTCGCGTTCCTCTACTTCATTAGTAATGTGAACAACATGCTTAGAATCAGCACACAAAGAAATAGTAGAACTAACATGTTCATTCACTAGTTGTGGCATGGATATAAGTGAAACATTATCACACAACTCTTCTTTATCACAAGGAACAGCAAGTAAATCAACTTGTGACAAAGGCAACTCAGCAATTGATTCCACTAATGGTTGCTCTACTATAGCATGAAAAGTGGACAAGTGTAGCTCACCTTGAGAATACTCACCTTCATTTCTCTCAGCACCATTTAATTTACCTTGCGAACTTTCTTCAGATAATGTAGCTGCATCAGCCTTCTCCTCATTCGCGAGTGATGGAAGTGACATCTCAAACATATCGTTCTTCTCATTTTGGAGACTTTTCTGAACTTCCTGCAAAACATCAGTGATAGGAGGCACAAGCATATCTTGTTGCTCCGTTGGATTCTCCAAAGTTTTGCGCTCAACAATGCAAGCAAGCATGAACAATTGGCCTATATGATTATATGTCACATTAACAAGCCCAGCCTGAATATTGAAATTAAGCCCTCTGAAAAATCTAGTCATTGTGTTCTCATTCGATTCTTGTAAACCACTATAAGTGATACAAATTTTAAAATCATGAAAGTACTCCCTAACAGTTTTGTCACCTTGTTTTAGATGTTCCCATTTCTCAAGGAGAGCACGTCTATAGTATGAAAACACAAATCTTTTTCTCATCAGTATTTTGCATTCATCCCAAGTTTCAAGCTTATTCCCCACAGTATGCCACCAAAAAGATGCAGAACCGGTACACTTATTACTAGCAGCCTTAATCATTTGAGCATTAGAAAAATCATACTCATCAAATTGTTTTTCTACTGCTAGCTCCCAATTAATGTATGCAGCGGAATCATACTTTCCATCATAGACTGGTAACTTACATGCAACTTGTGCAAAATTATAGTCATGTACCTCATATGCATCACGTGAAGAAGTCGTCATATCTCGTCGAAGGTGTAGATGTTGACGTTGAGCATGACCATCTTGTTTCCCCTTGCGCAATCCTGCCAT

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CDS seq

MAGLRKGKQDGHAQRQHLHLRRDMTTSSRDAYEEVQKSLQNEKNDMFEMSLPSLANEEKADAATLSEESSQADCAKSTIWKNRGRFSVKKGRMM

Protein seq

MAGLRKGKQDGHAQRQHLHLRRDMTTSSRDAYEEVQKSLQNEKNDMFEMSLPSLANEEKADAATLSEESSQADCAKSTIWKNRGRFSVKKGRMM

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsMH63_11G0185400 OsMH63_11T0185400.1 Chr11 13303486 13304917 - maker
CDS seq

ATGGCAGGATTGCGCAAGGGGAAACAAGATGGTCATGCTCAACGTCAACATCTACACCTTCGACGAGATATGACGACTTCTTCACGTGATGCATATGAGGAAGTTCAGAAAAGTCTCCAAAATGAGAAGAACGATATGTTTGAGATGTCACTTCCATCACTCGCGAATGAGGAGAAGGCTGATGCAGCTACATTATCTGAAGAAAGTTCGCAAGCGGACTGCGCGAAGAGCACCATATGGAAAAACCGAGGACGGTTTTCTGTGAAGAAGGGGAGGATGATGTGA

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Protein seq

MAGLRKGKQDGHAQRQHLHLRRDMTTSSRDAYEEVQKSLQNEKNDMFEMSLPSLANEEKADAATLSEESSQADCAKSTIWKNRGRFSVKKGRMM

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0 0 0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0189800 SBH 0.0120955 0.002933 0.008186
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Os XI: R9311 | R9311 | AGIS NA NA NA NA NA
Os XI-adm: HZ | HZ | PKU NA NA NA NA NA
Os XI-adm: J4155S | J4155S | PKU NA NA NA NA NA
Os XI-adm: LK638S | LK638S | PKU NA NA NA NA NA
Os XI-adm: XL628S | XL628S | PKU NA NA NA NA NA
Os GJ-temp: 02428 | 02428 | SICAU NA NA NA NA NA
Os cB: Basmati1 | Basmati1 | SICAU NA NA NA NA NA
Os O.glaberrima: Ogla | OglaRS2 | DIADE NA NA NA NA NA
Os XI-1A: CN1 | CN1 | SICAU OsCN1G1131856900.01 RBH None None None
Os XI-1A: D62 | D62 | SICAU NA NA NA NA NA
Os XI-1A: DG | DG | SICAU OsDGG1125104300.01 RBH None None None
Os GJ-temp: DHX2 | DHX2 | SICAU NA NA NA NA NA
Os XI-adm: FH838 | FH838 | SICAU NA NA NA NA NA
Os XI-1A: FS32 | FS32 | SICAU NA NA NA NA NA
Os XI-1A: G46 | G46 | SICAU OsG46G1120960900.01 RBH None None None
Os XI-adm: G630 | G630 | SICAU NA NA NA NA NA
Os XI-1B: G8 | G8 | SICAU NA NA NA NA NA
Os XI-1A: II32 | II32 | SICAU NA NA NA NA NA
Os XI-1B: J4155 | J4155 | SICAU NA NA NA NA NA
Os GJ-temp: Kosh | Kosh | SICAU NA NA NA NA NA
Os GJ-temp: KY131 | KY131 | SICAU NA NA NA NA NA
Os GJ-trp: Lemont | Lemont | SICAU NA NA NA NA NA
Os GJ-adm: LJ | LJ | SICAU NA NA NA NA NA
Os GJ-sbtrp: NamRoo | NamRoo | SICAU NA NA NA NA NA
Os XI-1B: R498 | R498 | SICAU NA NA NA NA NA
Os XI-1B: R527 | R527 | SICAU NA NA NA NA NA
Os XI-1B: S548 | S548 | SICAU NA NA NA NA NA
Os XI-2: TM | TM | SICAU NA NA NA NA NA
Os XI-3: Tumba | Tumba | SICAU NA NA NA NA NA
Os XI-adm: WSSM | WSSM | SICAU NA NA NA NA NA
Os XI-1B: Y3551 | Y3551 | SICAU NA NA NA NA NA
Os XI-1B: Y58S | Y58S | SICAU NA NA NA NA NA
Os XI-adm: YX1 | YX1 | SICAU NA NA NA NA NA
Os GJ-temp: ZH11 | ZH11 | SICAU NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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