Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: 02428_J4155S_INS0106890

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr01

4289314

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3971710

3972244

29 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
02428_125619_INS0108950	Chr01	4289314	4289314	3948220	3948754	535
02428_127518_INS0107960	Chr01	4289314	4289314	3962533	3963067	535
02428_127564_INS0108980	Chr01	4289314	4289314	3877806	3878340	535
02428_127742_INS0108610	Chr01	4289314	4289314	3964052	3964586	535
02428_132424_INS0107880	Chr01	4289314	4289314	3897289	3897823	535
02428_Basmati1_INS0106500	Chr01	4289314	4289314	3913736	3914270	535
02428_D62_INS0108370	Chr01	4289314	4289314	3736873	3737407	535
02428_DG_INS0108640	Chr01	4289314	4289314	3730108	3730642	535
02428_FH838_INS0108310	Chr01	4289314	4289314	4231288	4231822	535
02428_FS32_INS0108100	Chr01	4289314	4289314	3879806	3880340	535
02428_G630_INS0108360	Chr01	4289314	4289314	3942339	3942873	535
02428_G8_INS0108450	Chr01	4289314	4289314	3966034	3966568	535
02428_HZ_INS0108520	Chr01	4289314	4289314	3973037	3973571	535
02428_II32_INS0108240	Chr01	4289314	4289314	3865892	3866426	535
02428_IR64_INS0108870	Chr01	4289314	4289314	3845676	3846210	535
02428_J4155_INS0106910	Chr01	4289314	4289314	3958666	3959200	535
02428_J4155S_INS0106890	Chr01	4289314	4289314	3971710	3972244	535
02428_LK638S_INS0106470	Chr01	4289314	4289314	4078992	4079526	535
02428_R527_INS0108670	Chr01	4289314	4289314	3957957	3958491	535
02428_R9311_INS0108760	Chr01	4289314	4289314	3958207	3958741	535
02428_S548_INS0108360	Chr01	4289314	4289314	3965902	3966436	535
02428_Tumba_INS0108680	Chr01	4289314	4289314	3872026	3872560	535
02428_WSSM_INS0108600	Chr01	4289314	4289314	3962184	3962718	535
02428_XL628S_INS0109190	Chr01	4289314	4289314	3861680	3862214	535
02428_Y3551_INS0108280	Chr01	4289314	4289314	3942328	3942862	535
02428_Y58S_INS0106310	Chr01	4289314	4289314	3959032	3959566	535
02428_YX1_INS0108350	Chr01	4289314	4289314	3866459	3866993	535
02428_ZS97RS3_INS0108340	Chr01	4289314	4289314	3876430	3876964	535
02428_MH63RS3_INS0108300	Chr01	4289314	4289314	3948257	3948791	535

>02428_J4155S_INS0106890
GGCCTGTTTGGTTGGCAACCTGAGTGATGTGCCTAAGAAAACTACATGCCTAAGAGGCATTAGCTATCCTGTCAAAACTTGCCTGATGAGGCTAGCCTGAGCAAATGTTGTTTGGTTAGTAGCCTAAGCCTGAGGAAACTAAATTGAGATTAGATGGTTCATAATTACATGGTTAAGGTAGATATTATTTAAATAAAACGGTATCTTATATCCTAATCTATCGCATATAAGCAAATGTTGTATTTTCGGTTCGTTTGCACCAACCAAGATTCAACAATAAAATATTCCAACACCTTTTGCATGCACAGTCGTGGGCCCGTGACAGGACAAGCTTGATTAGCGCGTTTTGTTTTGTGTAACTAGACTGAGCCAGGCGCTCGTTTTTGGTGGCCTGAGCTAGGCTAATGAACCTATCAGGTTTTTCAGGTCAGGCAGAGAATGAAACCATCAGGCTACCAACCAAACGACACAGGATATCCCTCAGGGACATATCAGGCCAGGCTCTTTTGGCTCAGGGCTTCAACCAAACAGCCCC

Variation ID: 02428_J4155S_INS0106890

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-temp: 02428 | 02428

Os XI-adm: Jing4155S | J4155S

Chr01

4289314

4289314

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3971710

3972244

29

There is no gene in this region.