Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_10G0345300 | OGI:10063850 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr10:23051766-23053739 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | GTTAAATTGTTATCATATGCAGGTACTTGCACAGTGTTATCAATATAGTACTTATCTTACTGCAACTTGATAAGAGTATTTACAATTATAATTAACCAAGATCACCTTTTTGGAAGTGTAGCAAGCTAAGGAAACCCACAGTACACAGTTCTAGAGTTTCTGATCAAATTCCTCCAAATTAGGCTCATAGAAATGAAGAACAGAGCAGTAACTAATTAAGCATAGAGCAAATTAACTAGCTAATAATTAATATGAGCAAGATATCATCAAGAAAATAATTCATCTCACTGTTACACATGCAGTTGCTGAAGCTATATACGCAGCTGCTCCAAACATTGCCTGATCTTGATCAGTTGGCGTCGTCGCCGTCGCCGTCGTCAGTGCTAGCTTAGCCTTTCTCCAATTCAGATTGGCTCGAGCTCACAACCCAAGATCCAAGGAGCACATCTTCTTCCCCGCCGTCGACGACGACGTCGAGGACGACGGCGAGGGGAGCTGCAGGAGAGACAACGCTGCCGTCCGGCTCGCCGCTCCGGCGATGTCGTCGTCGTCGTCCATGGCCGCCGGGCAGTCGAGGTTCACCCCGAACAGCCGGACACGCTTCGGCCTTGTCGTCGTCGCCGCCTCCTGCACCGCCGAGGCGGCCGCGACGTGCACCGGCACCGACTTGAGCACCACAGCGGCCGGCACCTGCGGCCGGAGGAACAGCACGTGGCGGCTGGACGCCGGGGTGGAGCCGCCGCCGTAGCCGTAGCCGTAGCCGCCGCCATAGGCGGTGGTGTAGTCTCGCCACGGGCAAAGGGGCACGGACGGGAGCGGCGGGTGGTGTCGCTGATGATGGTGGTGCGAGTGCGACGGCGGCGCCGCCGTCGGCGGGAACATGAAGCTGCCGGCGTCCTGGCGGCGGCGGCGGAAGTCGATGAAGAGGCGGCCGCGGGCGGCGTCGCCGAGGCCGCGGCCGAACGACACGGTGTCGCCGGCGCCGAGGCGCTTCTCCTTGACGAAGCGGCTCCACCCTTTGGTCATCACGTAGCTCTGGCTGCTGTTCCAGTACGAGTACCGGAACCTCCACGCCTTCCCCGTCCTGTCCTCGAAGCTCAGCACCAGCCCCTTCCCCCCGCCGCCGCCACCGCCGCCACCACCGCCGCCGCCGGCGCCCGCCGCGGCGTCGAGCGGGAAGTACCTCTCGGCGTGCTGCTTGGGGATGACCAATCGGTTCAGCTTCCCCACGTCGCTCGGCGTCACGACCTTCTCAAACATGTGCTCCTTCTCCACCACCGCCCACGCCGCCGCCCCCCTCTCGGAATCCTCCTCACCGCCGGCGACCCTCGTCGGCGGCGAAATTGGGGTGAACTCCATAGCTAGGCTACCTAAGCTCGCGTGCTCCTCCTCCTACCAAAGCTGTTGACTTTGACTAGTATGCTAATTCCGGGAGCTAAGTTGGGATGATATATGAAACAGTGTACTCTCTGCTACTACTATTTTTGGAGACTTGGATTAGGGTTATATATATATCACCTTATTATAACATGGAGATCGAGTCTCCTTTAAGTAGTGGATGTTTTTCTTGGGGAGGAATAACAATACTACTACTACTAAATTGGTTCTAATTAATATATGGAGATCAATGAAGGGAAGATACTCAAGCTAGGAAGAAATGGAAGCTACCTACCTACCTTAGCTTAATTGGCTCTCTCTCTCTTGATAATATAGCACTGCATGTGGCACTGTGAATTAGGGGTGTCTCTAGATTGGTGTATATATGAGAGCTAGCATGGAGTATGAATGTATGTGTAACTAGGCACCCAGACTACCAGAGAGAGTGTGTGTGTGTGTATGAGGTTGCTATGGAAGGAGAAGAAGATGGCAACTATGTACACACACAACACAAGCACAAGTAGGTATATAGCCACCAAGTAGCTTTCTCAAGGAGGGGAAAGGAGAAGAAGAGAAGAAGAAGAAAGTGCAATGCAA
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| CDS seq | MEFTPISPPTRVAGGEEDSERGAAAWAVVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRRRRQDAGSFMFPPTAAPPSHSHHHHQRHHPPLPSVPLCPWRDYTTAYGGGYGYGYGGGSTPASSRHVLFLRPQVPAAVVLKSVPVHVAAASAVQEAATTTRPKRVRLFGVNLDCPAAMDDDDDIAGAASRTAALSLLQLPSPSSSTSSSTAGKKMCSLDLGL |
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| Protein seq | MEFTPISPPTRVAGGEEDSERGAAAWAVVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRRRRQDAGSFMFPPTAAPPSHSHHHHQRHHPPLPSVPLCPWRDYTTAYGGGYGYGYGGGSTPASSRHVLFLRPQVPAAVVLKSVPVHVAAASAVQEAATTTRPKRVRLFGVNLDCPAAMDDDDDIAGAASRTAALSLLQLPSPSSSTSSSTAGKKMCSLDLGL |
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| Function | Putative B3 domain-containing protein Os10g0537100 [UniProtKB/Swiss-Prot:Q8LNN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_10G0345300 | OsMH63_10T0345300.1 | Chr10 | 23051766 | 23053739 | - | maker | ||
| CDS seq | ATGGAGTTCACCCCAATTTCGCCGCCGACGAGGGTCGCCGGCGGTGAGGAGGATTCCGAGAGGGGGGCGGCGGCGTGGGCGGTGGTGGAGAAGGAGCACATGTTTGAGAAGGTCGTGACGCCGAGCGACGTGGGGAAGCTGAACCGATTGGTCATCCCCAAGCAGCACGCCGAGAGGTACTTCCCGCTCGACGCCGCGGCGGGCGCCGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGCGGGGGGAAGGGGCTGGTGCTGAGCTTCGAGGACAGGACGGGGAAGGCGTGGAGGTTCCGGTACTCGTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCCGCTTCGTCAAGGAGAAGCGCCTCGGCGCCGGCGACACCGTGTCGTTCGGCCGCGGCCTCGGCGACGCCGCCCGCGGCCGCCTCTTCATCGACTTCCGCCGCCGCCGCCAGGACGCCGGCAGCTTCATGTTCCCGCCGACGGCGGCGCCGCCGTCGCACTCGCACCACCATCATCAGCGACACCACCCGCCGCTCCCGTCCGTGCCCCTTTGCCCGTGGCGAGACTACACCACCGCCTATGGCGGCGGCTACGGCTACGGCTACGGCGGCGGCTCCACCCCGGCGTCCAGCCGCCACGTGCTGTTCCTCCGGCCGCAGGTGCCGGCCGCTGTGGTGCTCAAGTCGGTGCCGGTGCACGTCGCGGCCGCCTCGGCGGTGCAGGAGGCGGCGACGACGACAAGGCCGAAGCGTGTCCGGCTGTTCGGGGTGAACCTCGACTGCCCGGCGGCCATGGACGACGACGACGACATCGCCGGAGCGGCGAGCCGGACGGCAGCGTTGTCTCTCCTGCAGCTCCCCTCGCCGTCGTCCTCGACGTCGTCGTCGACGGCGGGGAAGAAGATGTGCTCCTTGGATCTTGGGTTGTGA
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| Protein seq | MEFTPISPPTRVAGGEEDSERGAAAWAVVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFIDFRRRRQDAGSFMFPPTAAPPSHSHHHHQRHHPPLPSVPLCPWRDYTTAYGGGYGYGYGGGSTPASSRHVLFLRPQVPAAVVLKSVPVHVAAASAVQEAATTTRPKRVRLFGVNLDCPAAMDDDDDIAGAASRTAALSLLQLPSPSSSTSSSTAGKKMCSLDLGL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.206656 | 1.07224 | 0.1053275 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0537100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g39190 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0537100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018360 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018780 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0018140 | RBH | 0.0 | 2.374296 | 0.810175 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018690 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018420 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0018700 | RBH | 1.7989885 | 6.2652065 | 3.421096 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0018320 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0370100 | RBH | 0.196246 | 0.543404 | 0.71599 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0018080 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018550 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0018120 | RBH | 0.0 | 0.0 | 0.219187 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018640 | RBH | 0.0 | 1.163796 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G018360 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018420 | RBH | 0.0 | 1.610384 | 0.412678 |
| Os XI: R9311 | R9311 | AGIS | R9311C10g34986 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_10g0232500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_10g0228300 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_10g0217300 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_10g0235100 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G1080000161.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G1080002133.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_037431 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G1030533600.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G1032122000.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG1023748800.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G1080002601.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G1028192400.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G1021208200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G1020031600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G1080003012.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G1080002638.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G1080002268.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G1080002885.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG1080002304.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G1018013400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG1080003101.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG1080002453.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG1080002401.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G1019104400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G1021732000.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G1040936800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG1080002293.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG1080002619.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG1080003177.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G1080002573.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG1080002292.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G1080002277.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G1080002356.01 | RBH | None | None | None |
