Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_07G0473100 | OGI:07079240 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr07:30233737-30236071 | ||||||||
| Gene Symbol | DLN196,OsDLN196 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | GTACATGACACACATTGGAATATCTGCCGAAGTGAGAAATGGATAATGGAAAAGCGAAAGCATGTACGGGAATTTTCAGAGATTGGCCTACCTTACGTAATAGTATTATTATTATTTTTAGAAGTATATGACAAAAATAACTTCATCTAATATAATACACGGTTACAGTAAATCATGCGTTAAAAAAAACTGCCTCCCGATCAGTCTCTACATGAACTAGATTACATATATTCAGAGAAATTAAAGCACCTTCCTTATTGATCATACATGGCGATCGATCGATGCACCACCACCATCTTTGGCTTAATTTCATCGTGCTCATAGCAAGAAATGAATCACTTGCCCAGTTGCTGCTTGCTAATTTTCTACTACCTGCTTTTCTCCATCGATCAGTTAAGTTGGTTCAGCTCCAGCCTGCACCATTCAGATCGATGTTTTCGCGCCTGTGAGAGTGGGACGACGACCTGCCATTGATGCTGAGGTCCAGCTCCGACGCCTGCAGCGTGCTCATCTCGCGGCGCCGTTCATCCGAACACGATCGTCGCCTGCTCGGCTCGTTGGGGAACAGCAGGTAGTGGTGCTCCTTGCCTGATCTTGCTGCTGCCGGCTCAAATGGCGGCAAGCCGATGGACAGGATGTCCTGCTCTCCTCTGTGGCCATGAGAGCGCGAGTGATGCGAGCCCTCGCAGTCGCAGGTGGTCAGGCAGCTGTCCACCGATCCATCGCCGACCTGCTGCTGCTGCTGGTGATAGTGAAGCTGGGTGTGCTCGTTTTGGAGGCGTTTCGATGAGGAGGCGTTTGCAGTTGCAGCAGTTTCTGCTACGGCGATGGTGCCGAGTGCCTCCTGCGCCTTCTCCAGCACTGACTGCAGGTACTTTCCTTGGGCTTCAATCCGAAGCTGCAGGTGTCTTTGTACCTTTTATTTTCAGGATCCATGATCACTTATAAATACTACTGATTTATTTATTAGGAGACACAAGACTATTGCTATGCATTGTTACATATATTCCATCGAGAAACAACTGAAAGATTTTTATATATACCTCTAGTTGTTCATGCAGCCGTCTCTGCACCTCAATTTGCATCTGGAGGGCTTCATTTATGTGCATAGAACTGCTAAAAAGATTATGAAATATACATTACATTCTGATGTTTGATGTTTCTATTCATGAGAGAAAAAATTAACTTTATTTGCTTCTTAGTTACCTGTTTGTCTGAGTCTCTAGGTCCAAGTGACTAGCCGGTGATCCATTTCCTTCACATGGTTTATCTATCTCTGTCGTACTACAACCTAAGACTGAAAACGTGAAAGCAAGTTTACTATCTCGCTTATTACTAATACTGATAATCAAGCTACTTCAGAGTTCAGAATCATGTAGCACTTACCACCTTGTGCACGGGAAGCATTGGCTTGAGATTGAAGATTCTTGCTAAGTCGGTATTTCTACGATAAAAGAAGCCAACTTAGTTTCTATCTTCAAGTCACGAATAATGCTAGACACCTATAGTTTAAACATATTTCAAAATGTACCTGAAGATGACTCTTAAGATGGTAAAGGGTTAATCCAGGAATTCCCATGAGCCTCATGATTGTTTTCGGCGTCGCCTCTGAAGAAGTTTCAAGTGTAGCCATTGTAAGATATGCAAATTTACCATTCCTCTGCTGCTTCAAAGCATGAATGATTAATTAAGTTTTGAATACTCACTGTCCGGCCCTCCCAGCTGATTTACTGCTTCCACAAAACGCTCATGCAACTCTGATGTCCATTTTAACCGAGGTTTAGCGTCGGTCGAGAGGACAAGCCCTGATGATGAATCTGCTCCGCCTTGCAGGAGAAATTGCTTCTCCGGAGACAAACCCGGCCTTGAAGACAGGTGCTGGCTATCACTCTGAACCTGTTGCTGATGATACATCATCTGCCATCAAAGATGTCATGTTACTAATTTGCAGATATCATCTTGTGTGAGCATAAGCATATGATACGAAAGGCCTCTCTTCCTTGCATGGTTCAAAGAAACTAACACAGTAGTACATACAGACCTGTTCAGTTCCAGTCATGCACTGAAATGTCTGTCTGCTTGTAGTAGGCTGCACATTTATCAGTAGTGATAAGATCCTCTGCAGCCTTTTTCAGTGCCTCTATTTGTAGTAACCAAAGACTTGATTGGATTATGTGTGTATGGTCTTCTGGGAGTGAGACAACCTTGGCTTCTTCAGACTATCTGCCTCTCCAATGACTAGCCGCTGCTGCCTCTGCTCATGTCAAGGTCTCAAGCAGAGAGTCTTGAGTCTTTATAAGGCAGGGAAGAGAATGTGGAATCACTGGGACAACAC
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| CDS seq | ATGACTGGAACTGAACAGATGATGTATCATCAGCAACAGGTTCAGAGTGATAGCCAGCACCTGTCTTCAAGGCCGGGTTTGTCTCCGGAGAAGCAATTTCTCCTGCAAGGCGGAGCAGATTCATCATCAGGGCTTGTCCTCTCGACCGACGCTAAACCTCGGTTAAAATGGACATCAGAGTTGCATGAGCGTTTTGTGGAAGCAGTAAATCAGCTGGGAGGGCCGGACAAGGCGACGCCGAAAACAATCATGAGGCTCATGGGAATTCCTGGATTAACCCTTTACCATCTTAAGAGTCATCTTCAGAAATACCGACTTAGCAAGAATCTTCAATCTCAAGCCAATGCTTCCCGTGCACAAGGTGTCTTAGGTTGTAGTACGACAGAGATAGATAAACCATGTGAAGGAAATGGATCACCGGCTAGTCACTTGGACCTAGAGACTCAGACAAACAGTTCTATGCACATAAATGAAGCCCTCCAGATGCAAATTGAGGTGCAGAGACGGCTGCATGAACAACTAGAGGTACAAAGACACCTGCAGCTTCGGATTGAAGCCCAAGGAAAGTACCTGCAGTCAGTGCTGGAGAAGGCGCAGGAGGCACTCGGCACCATCGCCGTAGCAGAAACTGCTGCAACTGCAAACGCCTCCTCATCGAAACGCCTCCAAAACGAGCACACCCAGCTTCACTATCACCAGCAGCAGCAGCAGGTCGGCGATGGATCGGTGGACAGCTGCCTGACCACCTGCGACTGCGAGGGCTCGCATCACTCGCGCTCTCATGGCCACAGAGGAGAGCAGGACATCCTGTCCATCGGCTTGCCGCCATTTGAGCCGGCAGCAGCAAGATCAGGCAAGGAGCACCACTACCTGCTGTTCCCCAACGAGCCGAGCAGGCGACGATCGTGTTCGGATGAACGGCGCCGCGAGATGAGCACGCTGCAGGCGTCGGAGCTGGACCTCAGCATCAATGGCAGGTCGTCGTCCCACTCTCACAGGCGCGAAAACATCGATCTGAATGGTGCAGGCTGGAGCTGA
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| Protein seq | MTGTEQMMYHQQQVQSDSQHLSSRPGLSPEKQFLLQGGADSSSGLVLSTDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLSKNLQSQANASRAQGVLGCSTTEIDKPCEGNGSPASHLDLETQTNSSMHINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQEALGTIAVAETAATANASSSKRLQNEHTQLHYHQQQQQVGDGSVDSCLTTCDCEGSHHSRSHGHRGEQDILSIGLPPFEPAAARSGKEHHYLLFPNEPSRRRSCSDERRREMSTLQASELDLSINGRSSSHSHRRENIDLNGAGWS |
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| Function | Myb-related protein 1 [UniProtKB/Swiss-Prot:Q9FK47] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0473100 | OsMH63_07T0473100.1 | Chr07 | 30233737 | 30236071 | - | maker | ||
| CDS seq | ATGACTGGAACTGAACAGATGATGTATCATCAGCAACAGGTTCAGAGTGATAGCCAGCACCTGTCTTCAAGGCCGGGTTTGTCTCCGGAGAAGCAATTTCTCCTGCAAGGCGGAGCAGATTCATCATCAGGGCTTGTCCTCTCGACCGACGCTAAACCTCGGTTAAAATGGACATCAGAGTTGCATGAGCGTTTTGTGGAAGCAGTAAATCAGCTGGGAGGGCCGGACAAGGCGACGCCGAAAACAATCATGAGGCTCATGGGAATTCCTGGATTAACCCTTTACCATCTTAAGAGTCATCTTCAGAAATACCGACTTAGCAAGAATCTTCAATCTCAAGCCAATGCTTCCCGTGCACAAGGTGTCTTAGGTTGTAGTACGACAGAGATAGATAAACCATGTGAAGGAAATGGATCACCGGCTAGTCACTTGGACCTAGAGACTCAGACAAACAGTTCTATGCACATAAATGAAGCCCTCCAGATGCAAATTGAGGTGCAGAGACGGCTGCATGAACAACTAGAGGTACAAAGACACCTGCAGCTTCGGATTGAAGCCCAAGGAAAGTACCTGCAGTCAGTGCTGGAGAAGGCGCAGGAGGCACTCGGCACCATCGCCGTAGCAGAAACTGCTGCAACTGCAAACGCCTCCTCATCGAAACGCCTCCAAAACGAGCACACCCAGCTTCACTATCACCAGCAGCAGCAGCAGGTCGGCGATGGATCGGTGGACAGCTGCCTGACCACCTGCGACTGCGAGGGCTCGCATCACTCGCGCTCTCATGGCCACAGAGGAGAGCAGGACATCCTGTCCATCGGCTTGCCGCCATTTGAGCCGGCAGCAGCAAGATCAGGCAAGGAGCACCACTACCTGCTGTTCCCCAACGAGCCGAGCAGGCGACGATCGTGTTCGGATGAACGGCGCCGCGAGATGAGCACGCTGCAGGCGTCGGAGCTGGACCTCAGCATCAATGGCAGGTCGTCGTCCCACTCTCACAGGCGCGAAAACATCGATCTGAATGGTGCAGGCTGGAGCTGA
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| Protein seq | MTGTEQMMYHQQQVQSDSQHLSSRPGLSPEKQFLLQGGADSSSGLVLSTDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLSKNLQSQANASRAQGVLGCSTTEIDKPCEGNGSPASHLDLETQTNSSMHINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQEALGTIAVAETAATANASSSKRLQNEHTQLHYHQQQQQVGDGSVDSCLTTCDCEGSHHSRSHGHRGEQDILSIGLPPFEPAAARSGKEHHYLLFPNEPSRRRSCSDERRREMSTLQASELDLSINGRSSSHSHRRENIDLNGAGWS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_07G0473100 | OsMH63_07T0473100.2 | Chr07 | 30233815 | 30236001 | - | maker | ||
| CDS seq | ATGACTGGAACTGAACAGATGATGTATCATCAGCAACAGGTTCAGAGTGATAGCCAGCACCTGTCTTCAAGGCCGGGTTTGTCTCCGGAGAAGCAATTTCTCCTGCAAGGCGGAGCAGATTCATCATCAGGGCTTGTCCTCTCGACCGACGCTAAACCTCGGTTAAAATGGACATCAGAGTTGCATGAGCGTTTTGTGGAAGCAGTAAATCAGCTGGGAGGGCCGGACAAGGCGACGCCGAAAACAATCATGAGGCTCATGGGAATTCCTGGATTAACCCTTTACCATCTTAAGAGTCATCTTCAGAAATACCGACTTAGCAAGAATCTTCAATCTCAAGCCAATGCTTCCCGTGCACAAGTCTTAGGTTGTAGTACGACAGAGATAGATAAACCATGTGAAGGAAATGGATCACCGGCTAGTCACTTGGACCTAGAGACTCAGACAAACAGTTCTATGCACATAAATGAAGCCCTCCAGATGCAAATTGAGGTGCAGAGACGGCTGCATGAACAACTAGAGGTACAAAGACACCTGCAGCTTCGGATTGAAGCCCAAGGAAAGTACCTGCAGTCAGTGCTGGAGAAGGCGCAGGAGGCACTCGGCACCATCGCCGTAGCAGAAACTGCTGCAACTGCAAACGCCTCCTCATCGAAACGCCTCCAAAACGAGCACACCCAGCTTCACTATCACCAGCAGCAGCAGCAGGTCGGCGATGGATCGGTGGACAGCTGCCTGACCACCTGCGACTGCGAGGGCTCGCATCACTCGCGCTCTCATGGCCACAGAGGAGAGCAGGACATCCTGTCCATCGGCTTGCCGCCATTTGAGCCGGCAGCAGCAAGATCAGGCAAGGAGCACCACTACCTGCTGTTCCCCAACGAGCCGAGCAGGCGACGATCGTGTTCGGATGAACGGCGCCGCGAGATGAGCACGCTGCAGGCGTCGGAGCTGGACCTCAGCATCAATGGCAGGTCGTCGTCCCACTCTCACAGGCGCGAAAACATCGATCTGAATGGTGCAGGCTGGAGCTGA
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| Protein seq | MTGTEQMMYHQQQVQSDSQHLSSRPGLSPEKQFLLQGGADSSSGLVLSTDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLSKNLQSQANASRAQVLGCSTTEIDKPCEGNGSPASHLDLETQTNSSMHINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQEALGTIAVAETAATANASSSKRLQNEHTQLHYHQQQQQVGDGSVDSCLTTCDCEGSHHSRSHGHRGEQDILSIGLPPFEPAAARSGKEHHYLLFPNEPSRRRSCSDERRREMSTLQASELDLSINGRSSSHSHRRENIDLNGAGWS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.152142 | 3.9180905 | 0.2053345 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0685300 | RBH | 1.200603 | 0.317132 | 0.566861 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48596 | RBH | 0.711299 | 0.214383 | 0.146664 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0685300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028090 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028140 | RBH | 0.081102 | 0.0 | 0.603577 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027930 | RBH | 1.060761 | 1.427926 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027720 | RBH | 0.090637 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028030 | RBH | 2.323400 | 0.000000 | 5.005016 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0197200 | RBH | 12.273699 | 42.926634 | 1.831911 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028460 | RBH | 0.461018 | 0.461773 | 0.508292 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0487000 | RBH | 3.000317 | 1.1141595 | 0.959167 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027750 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028200 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027920 | RBH | 0.0 | 12.034788 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028250 | RBH | 0.000000 | 0.151959 | 0.366343 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027810 | RBH | 0.225031 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027880 | RBH | 0.000000 | 0.561332 | 0.444909 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027630 | RBH | 0.427699 | 2.000309 | 2.977400 |
| Os XI: R9311 | R9311 | AGIS | R9311C07g27789 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_07g0326100 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_07g0331400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_07g0320100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_07g0332200 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0712825400.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0726466000.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_027572 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0723639000.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0725612400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0717226600.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0720354600.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0721499600.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0716788000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0714179800.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0712729000.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0717307600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0725351000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0717734600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0720734400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0716034600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0712859000.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0712858200.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0720002800.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0714982400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0716097400.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0732391800.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0721201400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0716625000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0712776600.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0718311000.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0718880200.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0721940000.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0718089800.01 | RBH | None | None | None |
