Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0197200 | OGI:03031790 | 49/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:12161853-12163446 | ||||||||
| Gene Symbol | OsDLN85,OsDLN85a,DLN85a,DLN85b,OsDLN85b,DLN85 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | ATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAGTGAGCATTCGATTAAACCTTTCTGCCATAAGAGCAAGCACATAAAAATCATCATCTAAACACTTCAATCTTGCAGAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGGTATACATGGAACTTAGTATCACAGTTCTTTCATCTCTTTGTTTTAATGGGACACCACTCGGTTTCTTTTCATTTTACATGCCTTCAAGCAATATACTGATTGTTTTTTCTCTTTTGCACTAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGGTAAATTTCAGTTCTCAAATGATCAGCTTACCATAAAGCTCAATACTGAACTTCCTTTCCATTTTGTCAGCGCTAGTCTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTTGGAACCCAGACAAACAAGTAAGAGACAAGTGTACTTTTGCTCAAGCGCGTTCGCAGAAGGTTAACACCCTTTTGTATTTCTATCAGATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGGTACATGAGCAACTAGAGGTACAAAAACAGCACGAGTTTATAACATAAATTTATATTTATTGTAATAAACACTTTTGACATCCCTTTGAATTCATTGAAATATTACATTTTGGTTGAAAAATTAATGCAAAGAGGCGCACATAATATAGGTTGGATTTTATGATTAAATATCCAATAAATACAAAGAGCTAACAATGGCTTTTGAACAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAG
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| CDS seq | ATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTCTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTTGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGGTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAG
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| Protein seq | MYHHQQQLQSHNQLLPSRQSFPSERHLLMQGGSVSGESGLVLSTDAKPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSHLQKYRLSKNLHAQANAGNVKNALVCTTATEKPSEANGSPVSHLNLGTQTNKSVHIGEALQMQIEVQRRVHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLAKQNAGSVGLETAKMELSELVSKVSTECLQHAFSGFEIESSQMLQGHTMHLGDGSVDSCLTACDGSQKDQDILSISLSAQKGKEIGCMSFDMHVKERGSEDLFLDKLNRRPSNHPERCERRGGFSMSCQTANLDLNMNDTYDGPKHCKKFDLNGFSWA |
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| Function | Myb-related protein 2 [UniProtKB/Swiss-Prot:Q9SQQ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0197200 | OsMH63_03T0197200.1 | Chr03 | 12161853 | 12163446 | + | maker | ||
| CDS seq | ATGTATCATCATCAACAACAGCTCCAAAGCCACAACCAACTCTTGCCATCTAGGCAGAGTTTCCCTTCAGAACGGCACTTGCTTATGCAAGGAGGAAGTGTTTCAGGGGAATCAGGGCTTGTTCTCTCAACTGATGCAAAGCCTAGGTTAAAATGGACCCCTGAGCTACATGAGCGATTTGTGGAGGCAGTAAATCAACTTGGTGGTCCAGAAAAAGCTACCCCAAAAACAATCATGAGGCTCATGGGCGTCCCTGGATTAACACTGTATCATCTCAAGAGTCATCTTCAGAAATACAGACTAAGCAAAAATCTCCACGCTCAAGCCAATGCGGGAAATGTGAAAAATGCGCTAGTCTGCACCACAGCAACAGAGAAACCATCTGAAGCAAATGGATCACCAGTTAGTCACCTAAACCTTGGAACCCAGACAAACAAATCTGTGCACATAGGTGAAGCCCTTCAAATGCAAATTGAAGTTCAGAGACGGGTACATGAGCAACTAGAGGTACAGAGACACCTGCAACTCCGAATTGAAGCACAAGGAAAGTATCTACAATCGGTGCTGGAAAAGGCACAGGAGACACTTGCAAAGCAGAATGCAGGTTCGGTTGGTCTTGAAACTGCAAAGATGGAACTGTCAGAATTGGTCTCCAAAGTATCAACCGAATGCCTCCAGCATGCTTTTTCAGGCTTTGAGATTGAAAGTTCACAAATGCTACAAGGGCACACCATGCATCTCGGTGATGGATCGGTTGACAGCTGTTTAACTGCATGTGATGGTTCCCAGAAGGATCAAGATATCCTATCAATTAGCCTTTCAGCCCAAAAAGGAAAAGAGATTGGTTGCATGTCATTTGATATGCATGTGAAAGAAAGAGGAAGTGAGGATTTGTTTCTCGACAAGCTAAACAGAAGGCCTTCAAATCATCCAGAAAGGTGTGAGAGGAGAGGTGGCTTTAGTATGTCATGCCAGACAGCAAACTTGGATCTGAACATGAACGACACTTATGACGGGCCTAAACACTGCAAGAAATTTGATTTAAACGGGTTCAGCTGGGCCTAG
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| Protein seq | MYHHQQQLQSHNQLLPSRQSFPSERHLLMQGGSVSGESGLVLSTDAKPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSHLQKYRLSKNLHAQANAGNVKNALVCTTATEKPSEANGSPVSHLNLGTQTNKSVHIGEALQMQIEVQRRVHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLAKQNAGSVGLETAKMELSELVSKVSTECLQHAFSGFEIESSQMLQGHTMHLGDGSVDSCLTACDGSQKDQDILSISLSAQKGKEIGCMSFDMHVKERGSEDLFLDKLNRRPSNHPERCERRGGFSMSCQTANLDLNMNDTYDGPKHCKKFDLNGFSWA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 12.273699 | 42.926634 | 1.831911 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0325500 | RBH | 3.592712 | 7.256366 | 2.119022 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g20900 | RBH | 2.104901 | 2.560866 | 0.276105 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0325500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0016160 | RBH | 1.559988 | 11.186162 | 3.670522 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016000 | RBH | 0.751831 | 1.046961 | 1.169826 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0016020 | RBH | 2.495392 | 11.121840 | 4.870854 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0016010 | RBH | 0.327485 | 0.289496 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0015820 | RBH | 11.927920 | 4.132636 | 15.253930 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0473100 | RBH | 4.152142 | 3.9180905 | 0.2053345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0015700 | RBH | 0.726175 | 0.893569 | 1.609322 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0201300 | RBH | 12.4875365 | 18.350837 | 5.2938435 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0015960 | RBH | 0.372043 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0015970 | RBH | 1.182419 | 11.169178 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0016000 | RBH | 5.802290 | 15.552325 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0015880 | RBH | 2.684809 | 2.196326 | 2.024620 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0015820 | RBH | 1.068716 | 7.532969 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G015770 | RBH | 1.546989 | 1.354722 | 3.165333 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0015670 | RBH | 4.273053 | 30.582579 | 7.415687 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g11604 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0178500 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0175200 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0161400 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0178700 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0304543500.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0310879300.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_007014 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0309826500.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0310578100.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0304991100.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0304545900.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0306156500.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0304984500.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0305028500.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0304499700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0304518500.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0310341900.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0304528900.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0304534300.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0303617100.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0304568900.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0304560900.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0304540500.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0305857300.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0305078900.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0313702900.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0306509700.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0304480900.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0304513100.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0304558900.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0304538300.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0306841700.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0304578500.01 | RBH | None | None | None |
