Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0323200 | OGI:05056930 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr05:22180286-22181960 | ||||||||
| Gene Symbol | OsDLN141,DLN141,R2R3-MYB,Osmyb1 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CCCAAAATAGCATCTCAACGAATAATTACCTACCCAACGTTCCCTAGTGCCTAACTTCATACCATTTGAAGTCCTGAGAATTTGTGAAGTAGAAGCAAAGAATACTACTAGTACATATATTACCTACCAAAAACAAAACACATGATGTCTTTGCATAATATTCACATGATCCAAAATGCAAAGAGCCAGCACTAGAATCAGATGCCCAACGATTCCTCCCTTTTAGCACCAACCTTAGTCCACTATCTGATTATCATCATCTAGGAATATTTATCACTGAATAACATCGACCAATCTTTTTTAGAGGAACCAACATGAAGTTAATTACTACAAAGAAAAATAATAAAGAGAGAGAGAGAGAGATTGAGATCATGAAGATTGGATAATAGTAAGAAATATGAACAGATTAGAACCTTTTTCTTTCCCTTTTTTTTTCTGAAATTAAACAGTATTGTCGTCCACTAGAAAAACTCCCTGTGTTACACATGTTGGGAATTGAAGCTAATTAAGCCATCTCACATCTCATGGTCATATCTCATATGTACTGGCCTTGTTCCAACGGCCTGAAATATCTAAACTCGTGTGGGCCCTTGCTGTCAGCCTGACAGCTGCACGCCTCCCCGCCGCGGAAGCCGAGGTGGTAGCAGAGGCAGACCGGCCGCGCGCTGGTGGGCGTCTCCGCCGGCGGCGAGCTCGGCGTCGGCCCGACCGAGAGCTCGAGGTTGAGGTCGGGGCACCGCGGCTCCCCCGTGCTCGTTGTGCCGCTGCTGCTGCGGCAGCCGTCGTCCGAGGAGTCGACCGGGCGCGGCGGCGGCGGCGGCTTCGCCACGGCGAAGATCGCCGCGGCCGCCGCCTTCGCCGGGACGGATATGGGATGCGGCGGCGGTGGTGCCGCCTTGTTGCTCGCCGCGATGCCGTCACCGCCGCTGAGCAGCGGGCGGTGCGTCTGCGGGTCGATGCCGCGGGCGAGGAGCTTGCGCTTGATGTGCGTGTTCCAGTAGTTCTTGATCTCGTTGTCCGTCCTCCCCGGCAGCTGCCCGGCGATCAGAGACCACCTGAAAGAAGAAGCGAAACCGAATTGAGAATCACAAGGAATTGATGAATGCTCCATCGATCGGTGGCGGCGGCGCCGGAGACGGGGGGAGGGAGACTGACTTGTTGCCGAGGAGGCTGTGGAGGCGGATGATGAGCTCGTCCTCGTCGTCGGTGAAGTTGCCGCGCTTGAGGTCGGGGCGGAGGTAGTTCATCCACCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGGCCCGCCGCCTTGGGCAGCGAGCGCCAGCAGCCTTCGCCATGCGCCCTGATGTACGCGATGAGCCGCTGGTCCTCCTCCTTCGTCCACGCCCCCTTGTTCGTGTGCGCCTTCTCGCAGCACGGCGACCTCCCCATGGCCCCGCGCTCTAAGCTACAAATCCGCAACCACCGCGCGCGCCGCCTCGCTCTCTCGCGCTCTCTCTCGCTAGCTCGCTCGCGCGATTGTCCAATCTGCCCAGTTTCCAGGTGAGCCGCGGCGGGGGTACAGACAGACAGGAGGACACCGCGCGAGCTCGCCGGTATATATGGCGGGGCGAGCGCGCGCGAGAGAGGAGGAGAGGTAACTGAGCTCGCTGCGCCTGCGCGTCACGCGTCTGTTGACCCGGACGAGT
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| CDS seq | ATGGGGAGGTCGCCGTGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTCATCGCGTACATCAGGGCGCATGGCGAAGGCTGCTGGCGCTCGCTGCCCAAGGCGGCGGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGAGGACGAGCTCATCATCCGCCTCCACAGCCTCCTCGGCAACAAGTGGTCTCTGATCGCCGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTCGCCCGCGGCATCGACCCGCAGACGCACCGCCCGCTGCTCAGCGGCGGTGACGGCATCGCGGCGAGCAACAAGGCGGCACCACCGCCGCCGCATCCCATATCCGTCCCGGCGAAGGCGGCGGCCGCGGCGATCTTCGCCGTGGCGAAGCCGCCGCCGCCGCCGCGCCCGGTCGACTCCTCGGACGACGGCTGCCGCAGCAGCAGCGGCACAACGAGCACGGGGGAGCCGCGGTGCCCCGACCTCAACCTCGAGCTCTCGGTCGGGCCGACGCCGAGCTCGCCGCCGGCGGAGACGCCCACCAGCGCGCGGCCGGTCTGCCTCTGCTACCACCTCGGCTTCCGCGGCGGGGAGGCGTGCAGCTGTCAGGCTGACAGCAAGGGCCCACACGAGTTTAGATATTTCAGGCCGTTGGAACAAGGCCAGTACATATGA
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLARGIDPQTHRPLLSGGDGIAASNKAAPPPPHPISVPAKAAAAAIFAVAKPPPPPRPVDSSDDGCRSSSGTTSTGEPRCPDLNLELSVGPTPSSPPAETPTSARPVCLCYHLGFRGGEACSCQADSKGPHEFRYFRPLEQGQYI |
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| Function | Myb-related protein 308 [UniProtKB/Swiss-Prot:P81393] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0323200 | OsMH63_05T0323200.1 | Chr05 | 22180286 | 22181960 | - | maker | ||
| CDS seq | ATGGGGAGGTCGCCGTGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTCATCGCGTACATCAGGGCGCATGGCGAAGGCTGCTGGCGCTCGCTGCCCAAGGCGGCGGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGAGGACGAGCTCATCATCCGCCTCCACAGCCTCCTCGGCAACAAGTGGTCTCTGATCGCCGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTCGCCCGCGGCATCGACCCGCAGACGCACCGCCCGCTGCTCAGCGGCGGTGACGGCATCGCGGCGAGCAACAAGGCGGCACCACCGCCGCCGCATCCCATATCCGTCCCGGCGAAGGCGGCGGCCGCGGCGATCTTCGCCGTGGCGAAGCCGCCGCCGCCGCCGCGCCCGGTCGACTCCTCGGACGACGGCTGCCGCAGCAGCAGCGGCACAACGAGCACGGGGGAGCCGCGGTGCCCCGACCTCAACCTCGAGCTCTCGGTCGGGCCGACGCCGAGCTCGCCGCCGGCGGAGACGCCCACCAGCGCGCGGCCGGTCTGCCTCTGCTACCACCTCGGCTTCCGCGGCGGGGAGGCGTGCAGCTGTCAGGCTGACAGCAAGGGCCCACACGAGTTTAGATATTTCAGGCCGTTGGAACAAGGCCAGTACATATGA
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLARGIDPQTHRPLLSGGDGIAASNKAAPPPPHPISVPAKAAAAAIFAVAKPPPPPRPVDSSDDGCRSSSGTTSTGEPRCPDLNLELSVGPTPSSPPAETPTSARPVCLCYHLGFRGGEACSCQADSKGPHEFRYFRPLEQGQYI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.990589 | 35.943344 | 1.311461 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0429900 | RBH | 1.100310 | 2.655094 | 1.648883 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g35500 | RBH | 0.641855 | 1.527246 | 0.375833 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0429900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0018080 | RBH | 0.150361 | 6.587784 | 3.166732 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0018090 | RBH | 0.0 | 3.599687 | 1.625750 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0017900 | RBH | 1.057270 | 5.374576 | 5.153460 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0017940 | RBH | 0.176672 | 0.429037 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0018180 | RBH | 0.0 | 13.062137 | 0.702335 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0623400 | RBH | 9.179526 | 49.9063855 | 5.945327 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0017670 | RBH | 0.884459 | 1.301880 | 1.255261 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0334600 | RBH | 6.1099175 | 23.7581665 | 2.7733995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018000 | RBH | 0.0 | 0.154154 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0017910 | RBH | 0.111325 | 5.039261 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0018040 | RBH | 0.397292 | 17.443882 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0018090 | RBH | 0.893677 | 1.825487 | 0.278399 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0018110 | RBH | 0.344660 | 8.066051 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G017600 | RBH | 0.122201 | 2.568664 | 0.641979 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0017890 | RBH | 0.293686 | 12.265112 | 3.871402 |
| Os XI: R9311 | R9311 | AGIS | R9311C05g20078 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_05g0213500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_05g0216600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_05g0208600 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_05g0219600 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0509001000.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0519980600.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_023196 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0517209800.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0519148400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0510986400.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0512538600.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0514891200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0512010200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0509995200.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0508933600.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0511967600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0518924600.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0511346400.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0512692400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0511339800.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0509011200.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0509018800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0512504600.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0510897600.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0511141600.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0524699600.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0514719400.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0510276800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0508961600.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0511924400.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0512133600.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0515578200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0510542000.01 | RBH | None | None | None |
