Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_01G0623400 | OGI:01112460 | 42/50 | Minghui 63 | MH63RS3 | HZAU | Chr01:39688216-39689543 | ||||||||
| Gene Symbol | OsDLN31,R2R3-MYB,OsMYB22,DLN31 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | CTCTCTACGACTCTACCAACACGCCGCCGTCGCCGGCTCGCTCGCTCGCTGCCCATATATACGCGCGCCTCGCGTCTCCACTTCCCCTGCTATTACTACTAGTACAAAACCAACGCGAAGCTCTCGTCGCGCACAACCAACTCGACACCGCGGCGAGGCGAACCAACGGGCGGCGTGGGCATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTAAGTTGTAAACGGATTTCAATGCGCTGTCATCTGTTCTTGTGTTCTTGGTGCTGATCGATCGTTTGGTTGGTTGGCGCAGGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAGCACAGTAGGCTTTAGGGAAAAAAAACCTGTAAAAAACACAAAAAAAGACGGTGGGCAATAGAGTTTTTTCTAAGTTCTAATGGAGATGACTGATGTTGATTAGTTTGATTCTTGATGTTTATCATTAACCAAAAATCTGATTCTTTTCCTCTTCCCAATTTTCTGATTTGATTTAGCAGAATCTTACAAAAAGTAATTGGAG
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| CDS seq | ATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAG
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGIDPQTHRPVSAGSSAAAASGLTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAPSNASFARSAASPPSEDGHSSSGGSSDAPRCPDLNLDLDLDLSMSLPSSPPKTPAAASSTTASRHHHHQQQKTICLCYHLGVRNGDVCSCKAAAPSPAGPRAFRFLRPLEEGQYI |
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| Function | Myb-related protein 308 [UniProtKB/Swiss-Prot:P81393] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_01G0623400 | OsMH63_01T0623400-mRNA-1 | Chr01 | 39688216 | 39689543 | + | maker | ||
| CDS seq | ATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAG
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGIDPQTHRPVSAGSSAAAASGLTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAPSNASFARSAASPPSEDGHSSSGGSSDAPRCPDLNLDLDLDLSMSLPSSPPKTPAAASSTTASRHHHHQQQKTICLCYHLGVRNGDVCSCKAAAPSPAGPRAFRFLRPLEEGQYI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 9.179526 | 49.9063855 | 5.945327 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0874300 | RBH | 0.887465 | 1.453460 | 2.295315 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g65370 | RBH | 0.628323 | 0.975624 | 0.616362 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0874300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0042050 | RBH | 0.0 | 0.000000 | 3.175449 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0041630 | RBH | 0.0 | 1.923531 | 1.160639 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0041970 | RBH | 0.0 | 7.117144 | 1.281894 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0041440 | RBH | 0.0 | 0.523184 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0041010 | RBH | 1.891303 | 15.472695 | 7.146842 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0323200 | RBH | 4.990589 | 35.943344 | 1.311461 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0040650 | RBH | 0.0 | 0.288485 | 0.077032 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0624100 | RBH | 8.96588 | 40.413725 | 1.466275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0041010 | RBH | 0.0 | 0.109761 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040960 | RBH | 0.0 | 10.936728 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0041190 | RBH | 0.0 | 9.885895 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0041160 | RBH | 0.323971 | 1.062576 | 0.832711 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0041020 | RBH | 0.0 | 9.735049 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G041440 | RBH | 0.0 | 0.000000 | 1.428883 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0041100 | RBH | 0.0 | 15.997054 | 3.115594 |
| Os XI: R9311 | R9311 | AGIS | R9311C01g04629 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_01g0482900 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_01g0485000 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_01g0458100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_01g0488800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0101323900.01 | SBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0104665100.01 | SBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_004504 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0104715500.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0104798900.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0101671500.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0101325900.01 | SBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0100917700.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0101571700.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0101680700.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0101448900.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0101439900.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0104794300.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0101442900.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0101314500.01 | SBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0100995700.01 | SBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0101478700.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0101315500.01 | SBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0101324700.01 | SBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0102429100.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0102782700.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0107776300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0101466500.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0101416900.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0101423700.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0101448700.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0101452300.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0101460300.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0101316900.01 | SBH | None | None | None |
