Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0546000 | OGI:03089680 | 43/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:35216497-35223150 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | GAATCTTAGTTCTTTACTTTACAAAAAACGATATTATCTCTGGTGCCATTGTTCCTACTTCTACGACGATCAGATTACACCTTTACCCGATTTGGGAAGCTGCATCTGTTGACGAGTCCTTATGAGCCAATTATTCTACACTTCTTACTTGATGTAGCTTGTTATATAGGTTGTGATTAGGGCCTGAATTTATGTCTAGAGTATGTCCTTGAATCGCTGTTACATATTCAGCGAACATTGAGGAATCTGGCCGAAGGGAGAAGCACAAGATTACCTATGGGTATGGCCCAAAATTAATTGGGAGAAGCCCAACTGAGCGATGTACTGGTCAGGTTTCCAGCCTAACCAAACCCATCAGAAAATTCTGGCGTCGCCTTGAAGAAACAAACGCTGCTCGCATACTATCATAAACAACACAGTATGCCGATAAACTTCAGATATCAAAGCAAAACTGAGAACAGTTCAGCGCAATTGATCAGAAGCATACCTGTATACACGGCAGTCATCAGAAGCTTTACTGTAACCAAGAGATTGTGTGAGCTTTTTGTACAGGGACACCACAATTTACACGACATACATGTAACATGTTAGTACAGCTCTTACTATATATCTTACACAGCAGAATGCGTCCCTATTGACTGCAAAGAACAGCAAGTCCGCAGCTGTTGGATTTCCCACAAACAGCTTGACTTGGACAATGCAAATCCTCCTCTACAGCGAGATGCATCCTTGGTAGTACTTCACTAGCCAACATAGCAAGCGACGAGAGCAATGAACGGCGCCCAGAATTCACAGTTCTACATGACGGATGGGATTGAGTCATTCTTATCTGCCATGAAGAATGACAGGTTTCGAAACGCATCCAGGCTATTCACCATCATGCGATTCCAACTATTCTGACTGTCTCCTAAGAGTAAGTCCTCAGCTTGGTATCTCACGGATGGTATCTCTAAGTCCAGTGGTCCAAGTGAATCAGCCTATCCAAAGAGAAGACATAGTAAGTTATGATCAGTGTTGATAGATTATACTAGAAACTAAAACAGGCAGGGATAGGATATCTTACCCAATATAAGTCAGCTAGAGATTGATCCTTTAACCCAGAATCACTTTTACTTCGAGGTGGAGAATTGGCACAAAGTGCCTCCATATCTTTGGCATCATCCATACAAGGATTATCAGCAACCTTTGCTCCTGCTAAGTCCTGCAAACATGAAATAAATCATAGATTAACAACATTGATGTATAAAAAGTCGTTTTATTCTACAAGAGACCAAGAGATGGAAACAAACCTGAAGAAAGCCTTGAAACCCTTGTGAGGTTGAAGGAAGAACAACACTATCACTACCAGGAGAGCTGCTAGCTGAAGTGTTTGAACTTTCTTGCTTCCTAGATGCTGCCAAGTTAAAACTGAACTCATCACAGGTTTCTTCAGCACCCCAGATGGTCGAATGGGATGCAAGGGCTGGCTGCTCTACTGTTTTATGACGAGAAGCGTGAAGAGCAACAGCAGCATCAAATGAATCATAGCTGCAGGGATTCTCAAGAAACAATGTGTTTTTGGCAATAGCTGTCCCTGGACAATCTGTATTAGTACCTATGGATGCTTCTGTTAGTAAGTATCCAACACTGATATCAGTAAGGGTATCTGCCCACTCTCCTTCAGATATTATAGCACAATCCATCCCTAGATTAGCCTGAAGTATAACAGAAGCAATTAGAAGATAGCAGATTAATGTTCACTTGACAAAAATATGGATGGAACTGAAGTTGGACCTCTAAAACTTGGTTTGTGGAATCTTTTTCTTGCTTCTGCCTGCTAAACCATGAGGCGGGAAAATCACTGTGCTGCTCTTGCCCCTTAGCGCTCTTGCCTGTACTAAATGTCATAGCAAGAAATAATGCCGGCCGATCTTTTGAATTACAAAGGTGTTCCTCAGGAGCACAACTATTGAGAAAAGTACCATCCTTCTGCACACAAGCGTCTGAGGGAGATTTGGCATGGATGTCTTCAGGCATCATGCAATTCTTAAAATGAGTTGAAGATATTCCACTTCCTCCTTCAAGCTCAGCAAGGGAAAACCAACCATACCTTATTGGCGACAACAGTTAGCACTTGTTATGGCTTTCAACAAATGGTCTTATCACAATATTATAGTTTGTTACCCAGGAATTCATCCATACCTTAATCGAAAAACAGGCGGGCTATTCACAGAAAGAAAAACATCAGCCACCACAACTGTATCTCTTGTGGTCCATCTCTGATAGGTAGCTAAATCTTCTCGGTGAGCACAATATGGAAAAAGCAAAAGCTCTCCAGACGCAATGTTTGAGCTGCCCCACTTGCGGTTAAGATGTTCTAGTACAGAAGATATTTTTTTCCTACCGCTAACTGTGAGTTCCAGATGTGGATTATGTTCATCCTGTTGAAAAAAGATAGGACTATCAATATCTCAAACACCATCGAAAATTCATAAGGTAAATAGTGCTAGTAAGGTTATTTGCACTCCACATTCCATTAGTCCCATTTATCCTGAGAAATTTTATCAACCACAGTGATTTGAGTGTCCGAGCCAATAGTAAATCAGTAATAGCTGTTGTGCTAACACAGCTGCTGCAGGAAACACATGATTCATAATTTCATATTGCAGCTTGGTGGCAACAAACAGGCATATTTACCTTTTCCAATGCCTTTCGTGTGGCTTCATTGATTGGAAATAACTGCAATTTCAGCTTTGCAGGTGCTTGTTGATCTGCTTCATTCATACGATTTGTGCCTGGATCTGCCAGTGCAGGATAAAACATCAAGACAATAGGAACCAGTACCAGCCATTTCTAGTCAGAGAGCAGTGATAAGAAAGAATACCATCAACGGTACAAACATTGTTTGATGAGGGAGATAATGTCCTTGCATCAACATTCACTGTGTTGCGCTCAAGCTCTTCAGCTGCATCAGCGACTAAAGAAACACCAGCCATGGCATCTCTCTCCCATTTTTTATATGCAGTAGATGCAATGCCACCACCTAAAATACAAGTCCACTGCTCTCAAAACTATTGTAAGGAAAATTCGACACTTTAAGCTCACATAATAAAATTTATTGGATTATCGACATTTAGCTAAGACATACAGACTGCATATCGCATAAAATGAAAAAAGTAAAGGGTGTGCCACATGAAACCAAAAAAAAAAAAAAAGGCAGTGTCACCTGCTCTCCTTTTCTGTTTCACAGTAATTGTGGCAGAGAGGTCCCATTTAGTTGAACCTGACTTGTTATTGGAATTTGGTTCTGCACCCCTCTTGAAAACTGCCCCTTTTGAAGATGCTACTTTGCTACCATTTGAGACATCCACAGGTAGGAGTTTTACTGAGGAAGATTCATTTCCAGCAGTCCTGTTCAGAATTGGAGATGAAGAAGAAAGGCACTCATCCCCTCGTGGACACTTTTTTCTGGTTTTATTCCTGTCCTTTAGCAGTTGATTTCCCTATAAAGTTGGATATATCACATGAGAAAAAAAACAAAAATGAACATTTTTACAGTTACAAAGGAGTGGGAAAGTAACAAATGGTCATGCACCAATGCTTCTACGAATGTTTTGAATCTCCGAGGCTTCAGATGCAGTTTTGATGCACTGCAGCTAAATTTTTCAAGCAGAGACCACCTGCATAGAACGAATTCAGTATCGGAGAGTTTTCCATGCAATGTAAAAGAAACAACATCAGATCAAATCAAAAGCAATGACAATAAACAACAGACAGTATCTTTCTAGTGCATAGACTAGAATGCAATCTGCATGGAAATAAAAAATATATCTTTCATCAGAAGAATATTCTGAACCACGAAGTATGCCACCAAAATTTCAGAGACCATTTTATGGGACAGGTCTGAATCTAAAATAGAAGCAGTAAATATGTTAAGGTGTCTATACAGTATTGGTATGAAGGCCCCATAGTTCTAACCTACTAGGCATTATAGCAGTAAATTATAGACGTGTCCTCTGTAAATTAAAAGGATCACGTACCTACTACAGTCCTAGGTTCCTAGCCTACTAGGAAAAGGATATATATCATGAAGATAGCTCAGCAAAATTTTGAGGCCAAACACTACCCTTTGCAATCATGTTATATAAATAATATCAAGCAGTAGGGACCACATCTAATCAGATTAATTTGCATGCAGACATTCATTCCGTTACCAGCGGAGCATAGCAGCAACAGTGTCCTTTGAATTTTTTGCATCAAGTGAGAACTCAGGACCAAGAAGTTTCTTCATGCGTCGAACAAGACGATAGTAATAATGTCTGACCTATATTGCAAAAAATAAAAGGCAATGAATTATCAGTCCAACAGAAGAAATTCAGGTGTTCTCTAATTGATGCAAATATTATCTATAACTTTATATATGATGAACATACTTATGCTAGCTATGTGAGGATTGAGAGATAATTAAGTGTCTATGTATCAGAGAGAAAACTGTACTGATTTATTGGCAGCTATCACTTAAGCATGTCCAGTGCCCACATAGTCAACAGAACATGCTTAGATGATCAGGAACGAGCAGTGCAGGAAAATTCCTCTCTAAATGTTCCAGCCTCCAGGTGCAGAATCTTAGGTGGTAAGCTGCTGAGGAGTGTGCTTTATGGCCAAAGATGGACAAAATAGGGGGATAATATCGAGATACATCTAAAGCCTGAATAAAACTTAGTGCCAATTCTAAACATCATGTTTTGGCATTGAGAGCAATAGGTCACCCGGAGTGCCTACTGATGAACAAAACTTCTTTCAACCAGTGGCTGTGTAGCAGCCGGTTGAAAATCCGAGAGTCTCAAGTCTCAACGCCGGAGTTTCGATACGGTAGCAACACTTGTGGCTTCGACGATCTGGAAGGAGCAGAATGCCAGAGTCTTCAACCAAAGTTTTAGGGCATGGACAGATGTGGCGAGGGAAATGGCTCAAGAGGCAACGCTTTGGCGTCAAGCGAATTCAGCAATCCCCGCCCTACTCTTCCGAGAGAATCATGGTAGCCAAAATGTGCTGCGAGAATTAGGCCTTTGATTTTGTAATGCTTTCCAGTCCCTGTCCCCTGCTGCTCTTTCTTTAAATGTAAATAACCTTTATTTCTCTTAATGGAAAAAATTCGCCTCTGGCGTATTCCCGAAAAAAAAAACATCATGTTCTGAAGTTTGAGTTTCCCATAACAGATCGGCTGCAAGTATATCAATAGAAACTTGAAAAAAAGATGAAATCAGCTTTAGTAAAGAAGAGGGATCAATTGCAAGTGAGGAAGATAAATCGGCTCCAAGTGATAGTACACAATCTGGATGGGAATCTAAAAGGAGGGATGTTGTAATCCATCCACCCTGCAGCCTTCTCCAGTTGAACCACGAAAATCAGCAAGAATGTAGGTATATGCTACAGGATGCTGGTGCTATGTCAAGCAACAACAACGACCATGGTTGAAAATGAGATTTGCCCATGACAGTTACTTCTGATTTTTTTTTCTCAAAGCAAAATAGATTTATTCAATTCTAATTGGCATCCCATCATAGTGAAAGTTATTTAGCACATTGCATGTAGAACTAAAATTTACAGCCTAACTTGAATCTTCCTTTCATTCAAATTTCCTAATTGGTTAAATAAAGAACGTCAAATATCATAAAAAAATACTAAATTTATGATCTAATGTGTATCTACCACTGCTTCAACGTCCTAACGTATCAATACAGAATGTTAAATATCATATGAACATCTTACACCTCTTGGCCGAAAATGGTGTACCTGATCCTTGTTTTTGCTCTGGACACGGAGCGTGATCTTCTCAAAATTCTGACACAAAGGAAAAGTTATTGCTGCATCTATCGATCAGCGCACACATTGATCAGATTGCAAGAAACAGCGTAGCATCATAACATCGATGCGTCTTACTTTTCCTTCCAGGCGCAGCGCATTGAAAAAGCTCTGTTCCTCTTGGCGTGTCCATGCCGCCCATTGCCGAGTCGGCTTCTCGGCAGAGGCAGGCCTCACTTGGGGCATAGAGCTCAGCTGAACCCCCAATTTTTCTTGATCCTGGAAACAAATTGCTTCGATTAGTACTGCATCACGCATGAAATCGACAGGAAACTGGATGGATTAATTGGATTGAAACAAACAACAATCGAATTCTGAATGGATGTTCAATCCAAGCTGAGCGAGGGGGAGGAAGAGCTACTAGAGAAAAAGAAGAATGAAATACCTTCGATTCGAACCGCGATGCGATGGAGGCCGGCGGCGTCGCCTCTGGATCCAAACCTGCTCGAGGAGGCTGCGATTGCGATGGAGACGAAGCTAGGGCATGCTCGCCGCCGGAGCTAGTGAGATGGAGAGGGTGGCGGTGAGCGGCGGAGGGGAATTTGGGACCAAAGGGCGGTGAACGAGCCGAGCTCGAGCGAGCCAACCTGAATAGGCTCAAAGCCGAGTCGGGGCTCTGGAGCCTATCGCCCTATCCTAGTATTGAACTCTTGAGGGTTGTTAGGCTCGAGCTCGGCTCGAGCAATGCTATGTGAGGCTTGGAGCTCGGCTCGTCTGATACTCTACCATGGCATTAATGGAAATACAAGAATATTGTTTGGACAACGTGTAGAATAAACTTTATCTAAAAAAACATGTATCGTAGAGTAC
More
|
||||||||||
| CDS seq | ATGCCCCAAGTGAGGCCTGCCTCTGCCGAGAAGCCGACTCGGCAATGGGCGGCATGGACACGCCAAGAGGAACAGAGCTTTTTCAATGCGCTGCGCCTGGAAGGAAAAAATTTTGAGAAGATCACGCTCCGTGTCCAGAGCAAAAACAAGGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTTGGTCCTGAGTTCTCACTTGATGCAAAAAATTCAAAGGACACTGTTGCTGCTATGCTCCGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACATTCGTAGAAGCATTGGGAAATCAACTGCTAAAGGACAGGAATAAAACCAGAAAAAAGTGTCCACGAGGGGATGAGTGCCTTTCTTCTTCATCTCCAATTCTGAACAGGACTGCTGGAAATGAATCTTCCTCAGTAAAACTCCTACCTGTGGATGTCTCAAATGGTAGCAAAGTAGCATCTTCAAAAGGGGCAGTTTTCAAGAGGGGTGCAGAACCAAATTCCAATAACAAGTCAGGTTCAACTAAATGGGACCTCTCTGCCACAATTACTGTGAAACAGAAAAGGAGAGCAGGTGGTGGCATTGCATCTACTGCATATAAAAAATGGGAGAGAGATGCCATGGCTGGTGTTTCTTTAGTCGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAATGTTGATGCAAGGACATTATCTCCCTCATCAAACAATGTTTGTACCGTTGATGATCCAGGCACAAATCGTATGAATGAAGCAGATCAACAAGCACCTGCAAAGCTGAAATTGCAGTTATTTCCAATCAATGAAGCCACACGAAAGGCATTGGAAAAGGATGAACATAATCCACATCTGGAACTCACAGTTAGCGGTAGGAAAAAAATATCTTCTGTACTAGAACATCTTAACCGCAAGTGGGGCAGCTCAAACATTGCGTCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCACCGAGAAGATTTAGCTACCTATCAGAGATGGACCACAAGAGATACAGTTGTGGTGGCTGATGTTTTTCTTTCTGTGAATAGCCCGCCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGGAGGAAGTGGAATATCTTCAACTCATTTTAAGAATTGCATGATGCCTGAAGACATCCATGCCAAATCTCCCTCAGACGCTTGTGTGCAGAAGGATGGTACTTTTCTCAATAGTTGTGCTCCTGAGGAACACCTTTGTAATTCAAAAGATCGGCCGGCATTATTTCTTGCTATGACATTTAGTACAGGCAAGAGCGCTAAGGGGCAAGAGCAGCACAGTGATTTTCCCGCCTCATGGTTTAGCAGGCAGAAGCAAGAAAAAGATTCCACAAACCAAGTTTTAGAGGCTAATCTAGGGATGGATTGTGCTATAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTAACAGAAGCATCCATAGGTACTAATACAGATTGTCCAGGGACAGCTATTGCCAAAAACACATTGTTTCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCACGCTTCTCGTCATAAAACAGTAGAGCAGCCAGCCCTTGCATCCCATTCGACCATCTGGGGTGCTGAAGAAACCTGTGATGAGTTCAGTTTTAACTTGGCAGCATCTAGGAAGCAAGAAAGTTCAAACACTTCAGCTAGCAGCTCTCCTGGTAGTGATAGTGTTGTTCTTCCTTCAACCTCACAAGGGTTTCAAGGCTTTCTTCAGGACTTAGCAGGAGCAAAGGTTGCTGATAATCCTTGTATGGATGATGCCAAAGATATGGAGGCACTTTGTGCCAATTCTCCACCTCGAAGTAAAAGTGATTCTGGGTTAAAGGATCAATCTCTAGCTGACTTATATTGGGCTGATTCACTTGGACCACTGGACTTAGAGATACCATCCGTGAGATACCAAGCTGAGGACTTACTCTTAGGAGACAGTCAGAATAGTTGGAATCGCATGATGGTGAATAGCCTGGATGCGTTTCGAAACCTGTCATTCTTCATGGCAGATAAGAATGACTCAATCCCATCCGTCATGTAG
More
|
||||||||||
| Protein seq | MPQVRPASAEKPTRQWAAWTRQEEQSFFNALRLEGKNFEKITLRVQSKNKDQVRHYYYRLVRRMKKLLGPEFSLDAKNSKDTVAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDECLSSSSPILNRTAGNESSSVKLLPVDVSNGSKVASSKGAVFKRGAEPNSNNKSGSTKWDLSATITVKQKRRAGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVDDPGTNRMNEADQQAPAKLKLQLFPINEATRKALEKDEHNPHLELTVSGRKKISSVLEHLNRKWGSSNIASGELLLFPYCAHREDLATYQRWTTRDTVVVADVFLSVNSPPVFRLRYGWFSLAELEGGSGISSTHFKNCMMPEDIHAKSPSDACVQKDGTFLNSCAPEEHLCNSKDRPALFLAMTFSTGKSAKGQEQHSDFPASWFSRQKQEKDSTNQVLEANLGMDCAIISEGEWADTLTDISVGYLLTEASIGTNTDCPGTAIAKNTLFLENPCSYDSFDAAVALHASRHKTVEQPALASHSTIWGAEETCDEFSFNLAASRKQESSNTSASSSPGSDSVVLPSTSQGFQGFLQDLAGAKVADNPCMDDAKDMEALCANSPPRSKSDSGLKDQSLADLYWADSLGPLDLEIPSVRYQAEDLLLGDSQNSWNRMMVNSLDAFRNLSFFMADKNDSIPSVM |
||||||||||
| Function | TSL-kinase interacting protein 1 [UniProtKB/Swiss-Prot:Q8LJT8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0546000 | OsMH63_03T0546000.1 | Chr03 | 35216929 | 35223150 | - | maker | ||
| CDS seq | ATGCCCCAAGTGAGGCCTGCCTCTGCCGAGAAGCCGACTCGGCAATGGGCGGCATGGACACGCCAAGAGGAACAGAGCTTTTTCAATGCGCTGCGCCTGGAAGGAAAAAATTTTGAGAAGATCACGCTCCGTGTCCAGAGCAAAAACAAGGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTTGGTCCTGAGTTCTCACTTGATGCAAAAAATTCAAAGGACACTGTTGCTGCTATGCTCCGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACATTCGTAGAAGCATTGGGAAATCAACTGCTAAAGGACAGGAATAAAACCAGAAAAAAGTGTCCACGAGGGGATGAGTGCCTTTCTTCTTCATCTCCAATTCTGAACAGGACTGCTGGAAATGAATCTTCCTCAGTAAAACTCCTACCTGTGGATGTCTCAAATGGTAGCAAAGTAGCATCTTCAAAAGGGGCAGTTTTCAAGAGGGGTGCAGAACCAAATTCCAATAACAAGTCAGGTTCAACTAAATGGGACCTCTCTGCCACAATTACTGTGAAACAGAAAAGGAGAGCAGGTGGTGGCATTGCATCTACTGCATATAAAAAATGGGAGAGAGATGCCATGGCTGGTGTTTCTTTAGTCGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAATGTTGATGCAAGGACATTATCTCCCTCATCAAACAATGTTTGTACCGTTGATGATCCAGGCACAAATCGTATGAATGAAGCAGATCAACAAGCACCTGCAAAGCTGAAATTGCAGTTATTTCCAATCAATGAAGCCACACGAAAGGCATTGGAAAAGGATGAACATAATCCACATCTGGAACTCACAGTTAGCGGTAGGAAAAAAATATCTTCTGTACTAGAACATCTTAACCGCAAGTGGGGCAGCTCAAACATTGCGTCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCACCGAGAAGATTTAGCTACCTATCAGAGATGGACCACAAGAGATACAGTTGTGGTGGCTGATGTTTTTCTTTCTGTGAATAGCCCGCCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGGAGGAAGTGGAATATCTTCAACTCATTTTAAGAATTGCATGATGCCTGAAGACATCCATGCCAAATCTCCCTCAGACGCTTGTGTGCAGAAGGATGGTACTTTTCTCAATAGTTGTGCTCCTGAGGAACACCTTTGTAATTCAAAAGATCGGCCGGCATTATTTCTTGCTATGACATTTAGTACAGGCAAGAGCGCTAAGGGGCAAGAGCAGCACAGTGATTTTCCCGCCTCATGGTTTAGCAGGCAGAAGCAAGAAAAAGATTCCACAAACCAAGTTTTAGAGGCTAATCTAGGGATGGATTGTGCTATAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTAACAGAAGCATCCATAGGTACTAATACAGATTGTCCAGGGACAGCTATTGCCAAAAACACATTGTTTCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCACGCTTCTCGTCATAAAACAGTAGAGCAGCCAGCCCTTGCATCCCATTCGACCATCTGGGGTGCTGAAGAAACCTGTGATGAGTTCAGTTTTAACTTGGCAGCATCTAGGAAGCAAGAAAGTTCAAACACTTCAGCTAGCAGCTCTCCTGGTAGTGATAGTGTTGTTCTTCCTTCAACCTCACAAGGGTTTCAAGGCTTTCTTCAGGACTTAGCAGGAGCAAAGGTTGCTGATAATCCTTGTATGGATGATGCCAAAGATATGGAGGCACTTTGTGCCAATTCTCCACCTCGAAGTAAAAGTGATTCTGGGTTAAAGGATCAATCTCTAGCTGACTTATATTGGGCTGATTCACTTGGACCACTGGACTTAGAGATACCATCCGTGAGATACCAAGCTGAGGACTTACTCTTAGGAGACAGTCAGAATAGTTGGAATCGCATGATGGTGAATAGCCTGGATGCGTTTCGAAACCTGTCATTCTTCATGGCAGATAAGAATGACTCAATCCCATCCGTCATGTAG
More
|
|||||||
| Protein seq | MPQVRPASAEKPTRQWAAWTRQEEQSFFNALRLEGKNFEKITLRVQSKNKDQVRHYYYRLVRRMKKLLGPEFSLDAKNSKDTVAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDECLSSSSPILNRTAGNESSSVKLLPVDVSNGSKVASSKGAVFKRGAEPNSNNKSGSTKWDLSATITVKQKRRAGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVDDPGTNRMNEADQQAPAKLKLQLFPINEATRKALEKDEHNPHLELTVSGRKKISSVLEHLNRKWGSSNIASGELLLFPYCAHREDLATYQRWTTRDTVVVADVFLSVNSPPVFRLRYGWFSLAELEGGSGISSTHFKNCMMPEDIHAKSPSDACVQKDGTFLNSCAPEEHLCNSKDRPALFLAMTFSTGKSAKGQEQHSDFPASWFSRQKQEKDSTNQVLEANLGMDCAIISEGEWADTLTDISVGYLLTEASIGTNTDCPGTAIAKNTLFLENPCSYDSFDAAVALHASRHKTVEQPALASHSTIWGAEETCDEFSFNLAASRKQESSNTSASSSPGSDSVVLPSTSQGFQGFLQDLAGAKVADNPCMDDAKDMEALCANSPPRSKSDSGLKDQSLADLYWADSLGPLDLEIPSVRYQAEDLLLGDSQNSWNRMMVNSLDAFRNLSFFMADKNDSIPSVM
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0546000 | OsMH63_03T0546000.2 | Chr03 | 35216929 | 35223150 | - | maker | ||
| CDS seq | ATGAAGAAACTTCTTGGTCCTGAGTTCTCACTTGATGCAAAAAATTCAAAGGACACTGTTGCTGCTATGCTCCGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACATTCGTAGAAGCATTGGGAAATCAACTGCTAAAGGACAGGAATAAAACCAGAAAAAAGTGTCCACGAGGGGATGAGTGCCTTTCTTCTTCATCTCCAATTCTGAACAGGACTGCTGGAAATGAATCTTCCTCAGTAAAACTCCTACCTGTGGATGTCTCAAATGGTAGCAAAGTAGCATCTTCAAAAGGGGCAGTTTTCAAGAGGGGTGCAGAACCAAATTCCAATAACAAGTCAGGTTCAACTAAATGGGACCTCTCTGCCACAATTACTGTGAAACAGAAAAGGAGAGCAGGTGGTGGCATTGCATCTACTGCATATAAAAAATGGGAGAGAGATGCCATGGCTGGTGTTTCTTTAGTCGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAATGTTGATGCAAGGACATTATCTCCCTCATCAAACAATGTTTGTACCGTTGATGATCCAGGCACAAATCGTATGAATGAAGCAGATCAACAAGCACCTGCAAAGCTGAAATTGCAGTTATTTCCAATCAATGAAGCCACACGAAAGGCATTGGAAAAGGATGAACATAATCCACATCTGGAACTCACAGTTAGCGGTAGGAAAAAAATATCTTCTGTACTAGAACATCTTAACCGCAAGTGGGGCAGCTCAAACATTGCGTCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCACCGAGAAGATTTAGCTACCTATCAGAGATGGACCACAAGAGATACAGTTGTGGTGGCTGATGTTTTTCTTTCTGTGAATAGCCCGCCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGGAGGAAGTGGAATATCTTCAACTCATTTTAAGAATTGCATGATGCCTGAAGACATCCATGCCAAATCTCCCTCAGACGCTTGTGTGCAGAAGGATGGTACTTTTCTCAATAGTTGTGCTCCTGAGGAACACCTTTGTAATTCAAAAGATCGGCCGGCATTATTTCTTGCTATGACATTTAGTACAGGCAAGAGCGCTAAGGGGCAAGAGCAGCACAGTGATTTTCCCGCCTCATGGTTTAGCAGGCAGAAGCAAGAAAAAGATTCCACAAACCAAGTTTTAGAGGCTAATCTAGGGATGGATTGTGCTATAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTAACAGAAGCATCCATAGGTACTAATACAGATTGTCCAGGGACAGCTATTGCCAAAAACACATTGTTTCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCACGCTTCTCGTCATAAAACAGTAGAGCAGCCAGCCCTTGCATCCCATTCGACCATCTGGGGTGCTGAAGAAACCTGTGATGAGTTCAGTTTTAACTTGGCAGCATCTAGGAAGCAAGAAAGTTCAAACACTTCAGCTAGCAGCTCTCCTGGTAGTGATAGTGTTGTTCTTCCTTCAACCTCACAAGGGTTTCAAGGCTTTCTTCAGGACTTAGCAGGAGCAAAGGTTGCTGATAATCCTTGTATGGATGATGCCAAAGATATGGAGGCACTTTGTGCCAATTCTCCACCTCGAAGTAAAAGTGATTCTGGGTTAAAGGATCAATCTCTAGCTGACTTATATTGGGCTGATTCACTTGGACCACTGGACTTAGAGATACCATCCGTGAGATACCAAGCTGAGGACTTACTCTTAGGAGACAGTCAGAATAGTTGGAATCGCATGATGGTGAATAGCCTGGATGCGTTTCGAAACCTGTCATTCTTCATGGCAGATAAGAATGACTCAATCCCATCCGTCATGTAG
More
|
|||||||
| Protein seq | MKKLLGPEFSLDAKNSKDTVAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDECLSSSSPILNRTAGNESSSVKLLPVDVSNGSKVASSKGAVFKRGAEPNSNNKSGSTKWDLSATITVKQKRRAGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVDDPGTNRMNEADQQAPAKLKLQLFPINEATRKALEKDEHNPHLELTVSGRKKISSVLEHLNRKWGSSNIASGELLLFPYCAHREDLATYQRWTTRDTVVVADVFLSVNSPPVFRLRYGWFSLAELEGGSGISSTHFKNCMMPEDIHAKSPSDACVQKDGTFLNSCAPEEHLCNSKDRPALFLAMTFSTGKSAKGQEQHSDFPASWFSRQKQEKDSTNQVLEANLGMDCAIISEGEWADTLTDISVGYLLTEASIGTNTDCPGTAIAKNTLFLENPCSYDSFDAAVALHASRHKTVEQPALASHSTIWGAEETCDEFSFNLAASRKQESSNTSASSSPGSDSVVLPSTSQGFQGFLQDLAGAKVADNPCMDDAKDMEALCANSPPRSKSDSGLKDQSLADLYWADSLGPLDLEIPSVRYQAEDLLLGDSQNSWNRMMVNSLDAFRNLSFFMADKNDSIPSVM
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0546000 | OsMH63_03T0546000.3 | Chr03 | 35216497 | 35223150 | - | maker | ||
| CDS seq | ATGCCCCAAGTGAGGCCTGCCTCTGCCGAGAAGCCGACTCGGCAATGGGCGGCATGGACACGCCAAGAGGAACAGAGCTTTTTCAATGCGCTGCGCCTGGAAGGAAAAAATTTTGAGAAGATCACGCTCCGTGTCCAGAGCAAAAACAAGGATCAGGTCAGACATTATTACTATCGTCTTGTTCGACGCATGAAGAAACTTCTTGGTCCTGAGTTCTCACTTGATGCAAAAAATTCAAAGGACACTGTTGCTGCTATGCTCCGCTGGTGGTCTCTGCTTGAAAAATTTAGCTGCAGTGCATCAAAACTGCATCTGAAGCCTCGGAGATTCAAAACATTCGTAGAAGCATTGGGAAATCAACTGCTAAAGGACAGGAATAAAACCAGAAAAAAGTGTCCACGAGGGGATGAGTGCCTTTCTTCTTCATCTCCAATTCTGAACAGGACTGCTGGAAATGAATCTTCCTCAGTAAAACTCCTACCTGTGGATGTCTCAAATGGTAGCAAAGTAGCATCTTCAAAAGGGGCAGTTTTCAAGAGGGGTGCAGAACCAAATTCCAATAACAAGTCAGGTTCAACTAAATGGGACCTCTCTGCCACAATTACTGTGAAACAGAAAAGGAGAGCAGGTGGTGGCATTGCATCTACTGCATATAAAAAATGGGAGAGAGATGCCATGGCTGGTGTTTCTTTAGTCGCTGATGCAGCTGAAGAGCTTGAGCGCAACACAGTGAATGTTGATGCAAGGACATTATCTCCCTCATCAAACAATGTTTGTACCGTTGATGATCCAGGCACAAATCGTATGAATGAAGCAGATCAACAAGCACCTGCAAAGCTGAAATTGCAGTTATTTCCAATCAATGAAGCCACACGAAAGGCATTGGAAAAGGATGAACATAATCCACATCTGGAACTCACAGTTAGCGGTAGGAAAAAAATATCTTCTGTACTAGAACATCTTAACCGCAAGTGGGGCAGCTCAAACATTGCGTCTGGAGAGCTTTTGCTTTTTCCATATTGTGCTCACCGAGAAGATTTAGCTACCTATCAGAGATGGACCACAAGAGATACAGTTGTGGTGGCTGATGTTTTTCTTTCTGTGAATAGCCCGCCTGTTTTTCGATTAAGGTATGGTTGGTTTTCCCTTGCTGAGCTTGAAGGAGGAAGTGGAATATCTTCAACTCATTTTAAGAATTGCATGATGCCTGAAGACATCCATGCCAAATCTCCCTCAGACGCTTGTGTGCAGAAGGATGGTACTTTTCTCAATAGTTGTGCTCCTGAGGAACACCTTTGTAATTCAAAAGATCGGCCGGCATTATTTCTTGCTATGACATTTAGTACAGGCAAGAGCGCTAAGGGGCAAGAGCAGCACAGTGATTTTCCCGCCTCATGGTTTAGCAGGCAGAAGCAAGAAAAAGATTCCACAAACCAAGTTTTAGAGGCTAATCTAGGGATGGATTGTGCTATAATATCTGAAGGAGAGTGGGCAGATACCCTTACTGATATCAGTGTTGGATACTTACTAACAGAAGCATCCATAGGTACTAATACAGATTGTCCAGGGACAGCTATTGCCAAAAACACATTGTTTCTTGAGAATCCCTGCAGCTATGATTCATTTGATGCTGCTGTTGCTCTTCACGCTTCTCGTCATAAAACAGTAGAGCAGCCAGCCCTTGCATCCCATTCGACCATCTGGGGTGCTGAAGAAACCTGTGATGAGTTCAGTTTTAACTTGGCAGCATCTAGGAAGCAAGAAAGTTCAAACACTTCAGCTAGCAGCTCTCCTGGTAGTGATAGTGTTGTTCTTCCTTCAACCTCACAAGGGTTTCAAGGCTTTCTTCAGGACTTAGCAGGAGCAAAGGTTGCTGATAATCCTTGTATGGATGATGCCAAAGATATGGAGGCACTTTGTGCCAATTCTCCACCTCGAAGTAAAAGTGATTCTGGGTTAAAGGATCAATCTCTAGCTGACTTATATTGGGCTGATTCACTTGGACCACTGGACTTAGAGATACCATCCGTGAGATACCAAGCTGAGGACTTACTCTTAGGAGACAGTCAGAATAGTTGGAATCGCATGATGGTGAATAGCCTGGATGCGTTTCGAAACCTGTCATTCTTCATGGCAGATAAGAATGACTCAATCCCATCCGTCATGTAG
More
|
|||||||
| Protein seq | MPQVRPASAEKPTRQWAAWTRQEEQSFFNALRLEGKNFEKITLRVQSKNKDQVRHYYYRLVRRMKKLLGPEFSLDAKNSKDTVAAMLRWWSLLEKFSCSASKLHLKPRRFKTFVEALGNQLLKDRNKTRKKCPRGDECLSSSSPILNRTAGNESSSVKLLPVDVSNGSKVASSKGAVFKRGAEPNSNNKSGSTKWDLSATITVKQKRRAGGGIASTAYKKWERDAMAGVSLVADAAEELERNTVNVDARTLSPSSNNVCTVDDPGTNRMNEADQQAPAKLKLQLFPINEATRKALEKDEHNPHLELTVSGRKKISSVLEHLNRKWGSSNIASGELLLFPYCAHREDLATYQRWTTRDTVVVADVFLSVNSPPVFRLRYGWFSLAELEGGSGISSTHFKNCMMPEDIHAKSPSDACVQKDGTFLNSCAPEEHLCNSKDRPALFLAMTFSTGKSAKGQEQHSDFPASWFSRQKQEKDSTNQVLEANLGMDCAIISEGEWADTLTDISVGYLLTEASIGTNTDCPGTAIAKNTLFLENPCSYDSFDAAVALHASRHKTVEQPALASHSTIWGAEETCDEFSFNLAASRKQESSNTSASSSPGSDSVVLPSTSQGFQGFLQDLAGAKVADNPCMDDAKDMEALCANSPPRSKSDSGLKDQSLADLYWADSLGPLDLEIPSVRYQAEDLLLGDSQNSWNRMMVNSLDAFRNLSFFMADKNDSIPSVM
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.8593855 | 8.501191 | 4.8348 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0773100 | RBH | 0.227177 | 1.562631 | 2.516827 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g56234 | RBH | 0.096905 | 0.995570 | 0.482994 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0773100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0036390 | RBH | 0.070966 | 5.852296 | 2.290230 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0036060 | RBH | 0.173451 | 0.000000 | 1.011890 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0036140 | RBH | 0.310524 | 3.284971 | 6.400639 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0036440 | RBH | 1.884974 | 7.177837 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0035950 | RBH | 5.220054 | 3.004159 | 11.800661 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0035750 | RBH | 0.036170 | 0.330584 | 1.061840 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0546700 | RBH | 3.845638 | 5.8235805 | 12.5226855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0036230 | RBH | 0.097847 | 0.093114 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0036250 | RBH | 3.885648 | 135.992279 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0035900 | RBH | 3.471021 | 7.551735 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0035990 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0035940 | RBH | 0.118162 | 1.679724 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G035750 | RBH | 0.123340 | 0.623721 | 1.536628 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0035540 | RBH | 8.907204 | 69.611107 | 54.751011 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g13821 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0419700 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0416900 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0394800 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0429300 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0305709200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0313399200.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_009261 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0311188400.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0312862400.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0306334400.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0305709000.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0308405200.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0306334000.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0306362400.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0305669800.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0305690600.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0312608200.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0305691600.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0305691200.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0306157600.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0305736600.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0305719000.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0305685200.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0307128400.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0306577800.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0315967000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0308752800.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0305667000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0305683800.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0305730800.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0305711000.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0309195000.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0305737000.01 | RBH | None | None | None |
