Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_03G0099100 | OGI:03015850 | 47/50 | Minghui 63 | MH63RS3 | HZAU | Chr03:5945668-5951843 | ||||||||
| Gene Symbol | OsIRL7 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | - |
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| DNA seq | AGACAGCTGGGCCCCACCGAGCAGTGAGAGGACGAGTAGTACAGATCCCACCAAAGTCGACGAGACGACCAAGCTCTTCTTCCTCCCCGCGAACAAAAAAAAAAAATCTCCTCCCCGCGTCGAATTCGAAGGGGAGAGAGCGCCGCGAGAGAGCGAGTTTGGCGGCGAGATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTTCCTGTTGATTGATTTTTCCTGTAAATTTAGTACCATTGGGGATTCTGTCTAGTCTGCTAGTTGGGGCGTGGAGGAATTTCGGTGCTCCCGAGTTCTTATCATCTGATGCTTAGTGATTCGGGTACACGATGACACGACAAATATGATGATGCATCCTAGGATTTCTGTTAATCAGCCGAAGGGGTCTACTGCCACATAGGCGTTAGGTTAAGCAAAGGTGTGATTTTTGGATTGCTTGCGGGTGTTTTAATCCTATGGGATTGCTAGGTGGAGGTCTGAAGGAAAGGCACAATCTTGCCGTTACAAGTATGTAATCATATGTGGTGATTGGTGAATGGTGATGGCCTGATGGGTTAACTTGGCCAATTCTTTTTCACTGTAGTTTCAGGGAATGCTGATGGTTAAAAACTTTTTGCCCATGGCACTTCCACACTTTATACTTACCCTTTATTCTTTCTCTCTCTAAAACAACTGCTGTACTTTCTCCTCTATTTGCATAATGGAGCTACTGCCTATCAATAATTAAATTCTTAATTAGCATGGGAAGTACTTTTTGCGACTAAATATTTAATAAACACTCACCAGATTGTAAGATTTTAGTGCTTTGTTCCATGTCCAGAAGATAGAGGTGCATTTTAATATTGGCGTTAGTTCTCATTCATTTGTTTGTCCTCATATCAGTATGTGTTATGTTCTACTATCTCATCTAAAATATATATTTATCCTGCAAGTCAATGCCAATTTATATTTAATTTTCTTCGAAGAACGAAGACACAAGGTTCTTTTACTGTGAAATTGAACTTTTCTTCCAAAATTGTTAAATGTCAATGTTACCATGCAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGGTATTTGGACTTTAGACCATGACCCCTGGATACTTAGAAGTTCTGCAATGCTAGTATCAATATGTTCTCTCTTTTTTTTTCTCATATATTGTCAGGAAGAAACTAGTTTGGAGTCGTTCATTGCTTCTTTCTTTCTTTTATTATGCACATCAGTATCAGATGGGAGGAAAAAAATTATGCACACCCCTTTTTTTTCACTTGGCATCACTAACAAATGCATATACTTGAAGCAAATCAGCAACAATTCGACAAGTTATTTTTTTTACCTTGCAGGGTTTCTTTGACAGTTTGGGTAGAAAAAAAATCCAATTGAACTGCACACACTGTATTTAGATGTTTCTATATCTTGAGAAATATCAATTAAATATATATTTTATGTTGCAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTAAGAGTTAATGTTAATATAAATCATGATTTGGTTCATCTTACCAAGTTACTAGAGACATGTATTTTTAAGAGTGGTTCTTCTTTGCTTGACATTTAAGTTTACTATTTCTTTTCTGTTCCTGTAGGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATGTTAGTTCATAAAAACCTAATGCTATCTTTATTTATATGTTTAGATAATATTTATCATTTGTCCACGTGTATATTCTTAATCCTAGCAACAAGTTAGTAGAGATTTATTGACTTTTGCAATATTACACTTCACAATTTCCCACGTCTAAGTCCTAACTTGTTTCTTCCATTCTATCCAGTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATGTAAGTTTCTTATTCGATTCAAGATGTTAAATTTTATATATCTTTGAAAAGCAACTTTTCTAGGCACAAAATATTTTTTTGTCTTCTCAAAACTTTTTTTTTTGGTATAGCATGAATGCCTTCAGAGTTACAAGCTATTCCTTCTTTTTATTTTCCTCTTCAGAATCAAATAAACTCTTGATTCTATATTTCCTCATATGAAATTTACGCAGCTTGTTACATTCCGTAAAGTTTCTTCTTTACTAGTAAGTATTTTAAACTTGTAATAATGGAGACTATGCTGTGCTCATCACTGTTTTTTCAACCTTTTTTTTTCCTGATGCAGATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGTAAGTCCATCAGTTTTTTGCAATGGTAGCATTTATATCATTTCAATTTTCTCTGCACCCTGTTCACATGCATCCATGTTAATGCTATACTGCTGCCACACACACACACACACACACACACACACACACACACACACACACTCAAACATGAGTGCTCTGTGCCGTCGTACTTTCCTATCTCGTATGCTATACCACCTGATATTCCATTGGGAAAGGCATGCCAGAACCATTTTTAGATACCTTTTGTCATCTAACTCAAATATGATCCAACCATTCATATGCTGTTTAAAAAAAAATGCAAAGCACATCGTGGTTTTCGTTTTCGATGCATCATCTTAGATAACCTTCACGAAAACATTTTCAGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAGGATTTGTCAGGTACGAACTTATGAATATGCTTTTCCCTCGTCGATTACTTCTGTGTTTGAACCTGGAGGCTCTAGGGTCAAAGTCAGTGAATAATGACTATTCATTTAGATTTGAAATATCCTGGTTACATTGTTGCCAACTTGTAACGTACAAAATAATAAGCAAAGATTCTCCGAACTTTGACTCTCCCTGACAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAGTTAGTGGCATGAAAGCTTAATACAGATTCTTGTAATTTGATTAATCTTGATTCAATTATAATTTGTTTTCTTTGTCTGTTGAAGATGGATGGCTTTACGGAATTTGAGGCGCGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTAGTTTTTCAGAAATTTTATTTAGTTTATAATTACCCCATTAGTCAAAAGACCAACTGTAAATCTAGTGTACATATTAGTTTTTCCGATACTCTGATTTGGTAAAAAGACAAAAAAAATGTATAACACACTAATGAATGAACTGTGTAATTTTTGCAAATATTCAATGAATTAGGTGTACATCACCATCTTTGATCTACTACCAGTAAGGGTCGTCTTTTTAGTACTGCTGCTGCTTGCTAAGGAATGCAAGCCATGACCCATGAGCATTGAATACCCATCAGCAGGAGTTCAACTCCAATGGTGCAAGAGAAAAAATAACATAAAGACTAGACCCATGAGCATTGAATACCCATTTTATGAAGCATGAATATAGCAAGAGTACCTTCTCTTCTCCGTGTTGGCTATGCTAGATGAGGTAACCATATAAACAGAAGAATTTAATAACTCGTTAGCTGAAAATTAAGAAATAATAACATGTGCTTTTTAGAGAATCACATATGCTTGATACTTTTACAGCATGCAATATATATGTTTCATTTTTCCCTCCGTCCAAACAGAAAAATCCTAAGTGATTTGCACATCAGTAGTGGCGCAAGGCAAAAGTGTCATGCTAATTCTGGCCAGGCAATGGAAAATGCATCTTGAGGTTGAGGACCCTTAACAAAGCCTACGATGAGATGTTGCATTGTTCTCTTTTTTTTCATTTTTCTTTTTGCTTGGATGGGTGAAGAGATATCGTAGTCATACTTGTTGCAATATGACTGGCTAGAGCTTGTGGAAGAAAGACCTGACCATTGAGGGTGGAGCTAGAACAAAATGGGGAGGGGTGCCACTGCTTGCTTTACTCTGCTTTAGGCCGAGTTTAGACTGATATGAGTACTTGAGTTTGGATTGAAGGGGATGCATATATGGTGAAAATATATGAACTATAACTAAAAAAATTTCTTGACCGGGTCCCTGGGTACCCCCCTCTTCAATGTAGCTCCCCTCTCTTCACCCACAAGTCCAGCTAGCCTAGCAAAGTTCACATTTTTCTTCTATCTTGCATCATCACACGAAGTGAACTGCGTGATCGTCGGAGACATCGAATCAAAGGTAAGGTTCTGTGATGATCAGCACCATGTACCACCACTTTTCTTTCTTGTTTTTGCTTGGAGTTATCTTTCTCATGATCTGACTCAAATGCACTTTGTGTTCTTGAATTTCTAGCTCTCGCCCATTCTGCTTGCTGCCCTGATCTCCTTCAAATTCTAGCCCAAAGAATGGAGGACCAGATGGCTAACCTTCGCTTGACTGACTTCGAGTTCTTCAGGATCATCCTGCCCGGATCCTCCAAAACGAAACTGGTAAACCATTTTTTTTGTTGATTCTTGGGTTTCTAGCTTCAGCCTAGTGTGTGTTTGATCGATCCGTGGTGGTGCAGAAGCTGCCTTACAAGTTCGCGAGGGAGCTTGGGGACCGAGAGCTCCGGGAGGCGAGGCTGCGGGTCGCCGGCGAGGGGCGGCGCCCGTGGGACGTGAAGGTGTTCGACGACGACGTCAGCGGCGACGTGTACCTGGGCCGCGGCTGGCAGGAGTTCGCCCGCGCCCACGACCTGCGTGACGGCCACTTCCTCATCTTCCGCTACGACGGCGCCGCCGCGTTCACCGTCACCGTCTTCGACGAGACCATGTGCCGCCGCGACTACCGCCGCCACCACGACGCCGCCGGCACGTAATTGCTCGCCGCCGCGGCCGGCCGCCGCCGCCCTCGCTCTGGCATGACTGATACCTGTGTGTTCCGCCTGCAGAGAGCGGAAGCAGCAGCAGCAGCGACAGCAGTGATGCGGCGGCGGCGGCGGCGGCGACGGCGGCGGCGGAGGGGGTCGGCGACGTGGCGCTGTCGCAGTTCGCCGTGACGCTGCGGCAGTGCAACCTCGAAGACAAGCAGGCGCAGTACTTGGTGAGCTCGTGCCCACTTCTTTTGCTGCCATTTCTTGTTGCCGATTGCCATGTGCTAGCTAAGTAGCTAACCAATCCGACCACCGGCCGTCGGCGGCGGCGGCGCAGAACGTGCCGATGGAGTTCCAGGAGGCGCACGAGTACGCGAGGCGGGAGAAGGTGGTGCTGCGGATGCGCGGGGAGGCATGGACGGTGAGGCTGAAGCACAGCAGGCGGGAGCGCGGCCAGCGCACGGCGTTCCGGTACGGGTGGCACCGGTTCTGCGTCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGTCCTCCGCGAGGGCGACCTCCGCCGCGGCGGCGCCGCCGACGACCACGTGCTCAAGGTCGCCGTGCGCAAGGCCGACGGCACCACCCTCGAGTGATCGATCTTACTAATTAACTACTGAGATTAATAAATTAATTAGCGCGCTCTCGTAGTCTCGTCTCGTCGTGTGTGTGTGTGTTTAGGTGTTGGTTAGTCGTTCTAAATGGCCCGTATTTGTCTTACGTTAAATCGTCTGGTACTTGATCGGATGGTGTTTGTGGGTGTGGCCACTGGCAGATCGACAGGTGGCCGAGCTGTGTACCGAACTGCTTTATTACTCTCTTTCACGAACAAGGCCCTGTGTTTCGCATTCACAACAATGGGAAACAACCCAATCTCGTCATAAGACTGGATGGATTCGTATCGCAAGTGCTCCCTCAGTGTTAATGTAAACCAACTTAATATAAAACGTGATATTTTATATTTAAATTTATTGTATT
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| CDS seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNRICQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLNYQKTNSLAHSACCPDLLQILAQRMEDQMANLRLTDFEFFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDETMCRRDYRRHHDAAGTGSSSSSDSSDAAAAAAATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRRGGAADDHVLKVAVRKADGTTLE
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| Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNRICQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLNYQKTNSLAHSACCPDLLQILAQRMEDQMANLRLTDFEFFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDETMCRRDYRRHHDAAGTGSSSSSDSSDAAAAAAATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRRGGAADDHVLKVAVRKADGTTLE |
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| Function | B3 domain-containing protein Os03g0212300 [UniProtKB/Swiss-Prot:Q10Q26] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0099100 | OsMH63_03T0099100-mRNA-1 | Chr03 | 5945668 | 5951843 | + | maker | ||
| CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAGGATTTGTCAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAATGGATGGCTTTACGGAATTTGAGGCGCGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTATCAAAAGACCAACTCTCTCGCCCATTCTGCTTGCTGCCCTGATCTCCTTCAAATTCTAGCCCAAAGAATGGAGGACCAGATGGCTAACCTTCGCTTGACTGACTTCGAGTTCTTCAGGATCATCCTGCCCGGATCCTCCAAAACGAAACTGAAGCTGCCTTACAAGTTCGCGAGGGAGCTTGGGGACCGAGAGCTCCGGGAGGCGAGGCTGCGGGTCGCCGGCGAGGGGCGGCGCCCGTGGGACGTGAAGGTGTTCGACGACGACGTCAGCGGCGACGTGTACCTGGGCCGCGGCTGGCAGGAGTTCGCCCGCGCCCACGACCTGCGTGACGGCCACTTCCTCATCTTCCGCTACGACGGCGCCGCCGCGTTCACCGTCACCGTCTTCGACGAGACCATGTGCCGCCGCGACTACCGCCGCCACCACGACGCCGCCGGCACCGGAAGCAGCAGCAGCAGCGACAGCAGTGATGCGGCGGCGGCGGCGGCGGCGACGGCGGCGGCGGAGGGGGTCGGCGACGTGGCGCTGTCGCAGTTCGCCGTGACGCTGCGGCAGTGCAACCTCGAAGACAAGCAGGCGCAGTACTTGAACGTGCCGATGGAGTTCCAGGAGGCGCACGAGTACGCGAGGCGGGAGAAGGTGGTGCTGCGGATGCGCGGGGAGGCATGGACGGTGAGGCTGAAGCACAGCAGGCGGGAGCGCGGCCAGCGCACGGCGTTCCGGTACGGGTGGCACCGGTTCTGCGTCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGTCCTCCGCGAGGGCGACCTCCGCCGCGGCGGCGCCGCCGACGACCACGTGCTCAAGGTCGCCGTGCGCAAGGCCGACGGCACCACCCTCGAGTGA
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| Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNRICQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLNYQKTNSLAHSACCPDLLQILAQRMEDQMANLRLTDFEFFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDETMCRRDYRRHHDAAGTGSSSSSDSSDAAAAAAATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRRGGAADDHVLKVAVRKADGTTLE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_03G0099100 | OsMH63_03T0099100-mRNA-2 | Chr03 | 5945668 | 5951843 | + | maker | ||
| CDS seq | ATGGGCTGCTGCAGCAGCCGGAGCGCGGACTCGCCGGCCAGCCGCGTCACGCGCTGGCGCTCCACCGGGATCGTCGCCCTCCGCGACGCCAGATTGAAGGTAGTACCAAATGAAGTTCTACAAGTAGGGAATTCCCTGAGGATTCTGGATTTGACTAACAATAAGATAGCTGAGATTCCCCAGGAAGTTGGCACACTCGTGAATATGCAAAGACTTGTTTTGGCTGGTAATTTGGTTGAAAGCATCCCAGCTAACATTGGATATCTGCGGAATCTTAAAATCCTCACACTTGACAGAAATAAGATCTCTGTCTTACCTGAAGAATTGGGTTCTCTATCAAATCTTCAACAACTCTCTATTTCTCAGAATTCTTTATCACGCCTGCCTAAGAGTGTAGGAGATTTGCGCAATATGTTGCTACTCAATGTATCTGACAACAAACTAATTGCACTTCCTGAATCAATTGGAGGTTGCAGTTCCCTGGAAGAATTGCAGGCAAATGGAAATTCAATTGAAGACGTGCCTTCATCAATCTGTAACCTTGTTTGCCTCAAATCCCTATCATTGAACGGGAATAGGATTTGTCAGCTTCCCCAAAACCTACTGAAAGACTGCAAGGCTCTTCAGAACATATCGTTGCATGACAATCCAATCTCGATGGACCAGTTTCAACAAATGGATGGCTTTACGGAATTTGAGGCGCGCCGAAGGAAAAAATTTGACAAACAGATTGATTCAAATGTCATGATGAGTTCCACAGCACTGGATGAAGGCATTGATTTGAACTATCAAAAGACCAACTCTCTCGCCCATTCTGCTTGCTGCCCTGATCTCCTTCAAATTCTAGCCCAAAGAATGGAGGACCAGATGGCTAACCTTCGCTTGACTGACTTCGAGTTCTTCAGGATCATCCTGCCCGGATCCTCCAAAACGAAACTGAAGCTGCCTTACAAGTTCGCGAGGGAGCTTGGGGACCGAGAGCTCCGGGAGGCGAGGCTGCGGGTCGCCGGCGAGGGGCGGCGCCCGTGGGACGTGAAGGTGTTCGACGACGACGTCAGCGGCGACGTGTACCTGGGCCGCGGCTGGCAGGAGTTCGCCCGCGCCCACGACCTGCGTGACGGCCACTTCCTCATCTTCCGCTACGACGGCGCCGCCGCGTTCACCGTCACCGTCTTCGACGAGACCATCGGAAGCAGCAGCAGCAGCGACAGCAGTGATGCGGCGGCGGCGGCGGCGGCGACGGCGGCGGCGGAGGGGGTCGGCGACGTGGCGCTGTCGCAGTTCGCCGTGACGCTGCGGCAGTGCAACCTCGAAGACAAGCAGGCGCAGTACTTGAACGTGCCGATGGAGTTCCAGGAGGCGCACGAGTACGCGAGGCGGGAGAAGGTGGTGCTGCGGATGCGCGGGGAGGCATGGACGGTGAGGCTGAAGCACAGCAGGCGGGAGCGCGGCCAGCGCACGGCGTTCCGGTACGGGTGGCACCGGTTCTGCGTCGACAACGGCCTCGCCGTCGGCGACACCTGCTTCTTCCGCGTCCTCCGCGAGGGCGACCTCCGCCGCGGCGGCGCCGCCGACGACCACGTGCTCAAGGTCGCCGTGCGCAAGGCCGACGGCACCACCCTCGAGTGA
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| Protein seq | MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIPQEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSISQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICNLVCLKSLSLNGNRICQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDLNYQKTNSLAHSACCPDLLQILAQRMEDQMANLRLTDFEFFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLIFRYDGAAAFTVTVFDETIGSSSSSDSSDAAAAAAATAAAEGVGDVALSQFAVTLRQCNLEDKQAQYLNVPMEFQEAHEYARREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAVGDTCFFRVLREGDLRRGGAADDHVLKVAVRKADGTTLE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.809285 | 4.1481495 | 3.222897 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0212200 | RBH | 0.599357 | 1.030744 | 5.392077 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g11360 | RBH | 0.323508 | 0.533765 | 1.343986 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0212200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0008280 | RBH | 0.0 | 0.0 | 5.713191 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0008240 | RBH | 0.000000 | 2.639196 | 2.004781 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0008330 | RBH | 0.0 | 0.0 | 8.049957 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0008310 | RBH | 0.136177 | 0.089696 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0008180 | RBH | 3.887095 | 0.0 | 4.903060 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0008120 | RBH | 0.070513 | 1.416314 | 0.186661 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0099800 | RBH | 2.6284375 | 2.998485 | 3.606788 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0008140 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0008210 | RBH | 0.197801 | 4.761286 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0008190 | RBH | 3.474531 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0008200 | RBH | 0.145253 | 0.186877 | 0.567121 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0008170 | RBH | 0.135041 | 2.048256 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G008210 | RBH | 0.000000 | 2.198548 | 1.961182 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0008080 | RBH | 0.000000 | 5.336776 | 5.128040 |
| Os XI: R9311 | R9311 | AGIS | R9311C03g10737 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_03g0087500 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_03g0087400 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_03g0083200 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_03g0089300 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0304163300.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0310297700.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_006190 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0309421700.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0309979700.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0304596500.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0304171300.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0305531700.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0304581100.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0304632300.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0304117700.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0304137500.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0309742100.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0304149100.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0304161500.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0302964900.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0304191500.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0304189700.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0304169500.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0305446100.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0304632100.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0313115300.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0305928900.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0304097500.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0304132100.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0304173700.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0304159100.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0306088300.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0304207500.01 | RBH | None | None | None |
