Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_02G0032400 | OGI:02006570 | 50/50 | Minghui 63 | MH63RS3 | HZAU | Chr02:1915678-1918506 | ||||||||
| Gene Symbol | OsNLP6,NLP6.1,NLP6 | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | |||||||||||
| DNA seq | CTAATCTGAGCTAGCGCAGGAACTCCCGATGTTATCAGCTACCTCCTGGACCATCAGCCTGACGACCACCGGAGCCGCCGCTCCGGAGCCTGACCTCGCCGTCACCGACATCGACGGCAATGCCGGGACGACGTCGAGGCACTCCTGGAAGTCGGCGTCGCAGGACAGAAGCACCCACTCGTGGTCGTCGTCCAGGTACTTGACGTCGAAGGCGCCGGCGTCCAGGCTCAGCCGCTTGGCCACCACCGCCTTCACCGCCGCGACGCCGGCTGAGCACGGCACCCTGAACCTGATGATGTCACCTCTGTGGCTGGCCTTGATGGTGACCACGCCGTCGCCATTGCCGCACCTCGGAGGTTTTCGCAATGCAGTTTTGGCGTGAGATGGCGGCGCCTGGCATGATCCATGGGAGGAGGTCTCTCCTACGGTACTTGACAGGCATGGCCGCGGTGGCGGCGGCGGCGGAGGGAGAAGAAGAGCTGGGTGAGCAGGCATGGCCACCGGCGGCGACGGCGAGCAGTTCACGGATTCCATGACGCGCTTCATCTTGTCGAGGGAGCGGTTCACCTTGCTGATCTTGCGAAATGGCCACCTTGGGATGCCATGCTGCCTGCAGATGCGTTTCATTGTTGTTGGGCATACTGCAAAACAAGAGGATAAAACTGTCACCTGGTGATCCAACTTTCAGTGGTTGCGTGTTAATTTGCGCATAAACATCAGGATTTTGATGAAGATAATCCACTGAATATCCAGCTGATTCATTTAACTCATCAATTATCATGATGATTATATGCAGGTTGTTGGCAAGTGTGATGTTGTCTTACCACCGAGGCTTCTTGCAGCATCCTTCAAGCTACCAGAGAAGTGTTTCTGCAGCTCCTCCAAAGTGACAGATTTCTCAGCTTTTCCTCTTTTCGTCTTGTTCTTGCCAACTTGTGATGTAGGATCCTCATTTCTGATTTGATCTGCATTGTGAATGTTAAGCTCACCAATGTTTGTGTTCTCCAGCAGCTGCAGATCCTCCTCGTCCGAGCATCTTTGATCATCTCCAAGATCATCCATTTCATGCCTTAGTTGGTGATCACCATCTGCCATAGTATCCAAGAACAAATCATCCAAGTTGCTGATCACAATGGCTTTCAGGTTGCCGGAGCATTGCTTGATCGTGGCGGAGACGGCGTCCACCGCCGCCTTCTGCTCCGCGACGCCGGTGCAGTCCGGCGGGAGGAAGAGCTCCAGCACGACGCAGTCCTCTTCGTCGCCGGCGGTGGCGGCGGCGGCGTCCGCCATGGCCGCCGCGCTGAGCTCAGCGCGTAGCACGAGGCATCCGGCGAGGCCGTACATGCCAGCGTAGTGCGCGAGAGGGTAGTCGTCCTTGGAGCACCGCGCGACGTCGGCGCAGAGGCGGCCGCCGCCCGGCGCGCGCGCCGCGGTGCCGACGAGCCCCTGGCCACGCTGCAGGTGGTGCTCGACGCAGGCGTCGCGGAAGCCCCGCGCGTCCGCGCCGGCGGCGAGGTGGAACGGCGCGCCGGCGGTCGTCAGCGCGGCCTTCTCCGTGTCCTCGCCGCCGCCGCCGCAGCTCCAGCATCTCACCCATGTCTGTGCCAATGGCAGCTTGTGAGCTTCGCACACCGTGATCAGGAGCTCCGATACCTCGGCCATGGCCGCCCGGGTCGCATCTCGATGGACTATCTGGTTCACGGCAAGCGAGTAACACTGGATCAGTAGATGAACGGATCATGCAATTTCTCGTGAAATTTCATGTGATCTCAACTCTCACCTCGGCTGCACGGTTGCAAATCCCTGCACCTCTCAGTGACACTGCCTGCATATGAACACAAGAAATGTTAATCACTTCACTAATCTAATCACTCCTGCTAATCATTTCTTGATCGAGACAGAGAGATTACCCGAAGAGCGTTGCAGAGGTTGGCGACCTCGCCGGAGACGCGGAGCAGCGGGGCGGTGGTGACGAGCTCGAGCACGGCGAGGGGGGAGCTCGCGTCGTCGGGGTCAAGGATGGGGAGGGCGAGGCTGCCCTGGATGTCGTAGATGAGCGCGTAGCTAATGCGGGCGTACTCGCCGCTGCCGTAGCACTGCACGTTGGGCGTCCACTCCGGCGCCGTCGCGTCGAACGCCCTGGCAGGAAGCCCCTGCTCGTCGGCGGCGGCGGCGCCGCCGACGGGGAAGACGCGCGTGAGGGAGACGGTCCTGTACTGGAACAGGCGGTGGCACTGCGACGCCAGGACGAACGGCTGCCCCCGCGTGGCGAGCACGCGCCGGGCGCCGTCCCTCGCCGGCGCCCACACCTGGACCATCCACCCGCCGCCGCCGTCGCCCGCCGCCTCCTTGTACAGCCGCAGCGCCCGCGCGATCCGCTGCTTCACCGCGACGGCCGCCGCCTCCTCCGTCCCCGGCGATCCCCCTCCCCCTCCCTCGCTCCCACCTGCGCACGCACGCATACAAACAAACACCTTCATCTCATGGACCATCTCGACGCGTTCTTGCAGATCAAGAAGCTCAAATCAAGCGCATCGGCGTGGCGCCTACACGGACGTTCACCGGCGGCGCCGCCGCGTTGGAGGAGGAGGTTGAAGTCGCCAACAACGCGCTCCATGTCGGCCTCCACCTCAACCACCAAGACCGATCCACCACGCAGACCAACCAAACAAAGAAGAAGACGATGCGAATATGCGACCCGAATCGATGGCAGCTACCGCTCCATCTCCATCTCCATCTGCATGGCGCGACCAATGTCGAGCCGCAGCTTCCCAAATCTCGCTTCTCTGGTCAACGTCTGTAGCCACCTTGTTTAATCGCGGCCCGGGG
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| CDS seq | ATGGTCCATGAGATGAAGGTGTTTGTTTGTATGCGTGCGTGCGCAGGTGGGAGCGAGGGAGGGGGAGGGGGATCGCCGGGGACGGAGGAGGCGGCGGCCGTCGCGGTGAAGCAGCGGATCGCGCGGGCGCTGCGGCTGTACAAGGAGGCGGCGGGCGACGGCGGCGGCGGGTGGATGGTCCAGGTGTGGGCGCCGGCGAGGGACGGCGCCCGGCGCGTGCTCGCCACGCGGGGGCAGCCGTTCGTCCTGGCGTCGCAGTGCCACCGCCTGTTCCAGTACAGGACCGTCTCCCTCACGCGCGTCTTCCCCGTCGGCGGCGCCGCCGCCGCCGACGAGCAGGGGCTTCCTGCCAGGGCGTTCGACGCGACGGCGCCGGAGTGGACGCCCAACGTGCAGTGCTACGGCAGCGGCGAGTACGCCCGCATTAGCTACGCGCTCATCTACGACATCCAGGGCAGCCTCGCCCTCCCCATCCTTGACCCCGACGACGCGAGCTCCCCCCTCGCCGTGCTCGAGCTCGTCACCACCGCCCCGCTGCTCCGCGTCTCCGGCGAGGTCGCCAACCTCTGCAACGCTCTTCGGGCAGTGTCACTGAGAGGTGCAGGGATTTGCAACCGTGCAGCCGAGATAGTCCATCGAGATGCGACCCGGGCGGCCATGGCCGAGGTATCGGAGCTCCTGATCACGGTGTGCGAAGCTCACAAGCTGCCATTGGCACAGACATGGGTGAGATGCTGGAGCTGCGGCGGCGGCGGCGAGGACACGGAGAAGGCCGCGCTGACGACCGCCGGCGCGCCGTTCCACCTCGCCGCCGGCGCGGACGCGCGGGGCTTCCGCGACGCCTGCGTCGAGCACCACCTGCAGCGTGGCCAGGGGCTCGTCGGCACCGCGGCGCGCGCGCCGGGCGGCGGCCGCCTCTGCGCCGACGTCGCGCGGTGCTCCAAGGACGACTACCCTCTCGCGCACTACGCTGGCATGTACGGCCTCGCCGGATGCCTCGTGCTACGCGCTGAGCTCAGCGCGGCGGCCATGGCGGACGCCGCCGCCGCCACCGCCGGCGACGAAGAGGACTGCGTCGTGCTGGAGCTCTTCCTCCCGCCGGACTGCACCGGCGTCGCGGAGCAGAAGGCGGCGGTGGACGCCGTCTCCGCCACGATCAAGCAATGCTCCGGCAACCTGAAAGCCATTGTGATCAGCAACTTGGATGATTTGTTCTTGGATACTATGGCAGATGGTGATCACCAACTAAGGCATGAAATGGATGATCTTGGAGATGATCAAAGATGCTCGGACGAGGAGGATCTGCAGCTGCTGGAGAACACAAACATTGGTGAGCTTAACATTCACAATGCAGATCAAATCAGAAATGAGGATCCTACATCACAAGTTGGCAAGAACAAGACGAAAAGAGGAAAAGCTGAGAAATCTGTCACTTTGGAGGAGCTGCAGAAACACTTCTCTGGTAGCTTGAAGGATGCTGCAAGAAGCCTCGGTGTATGCCCAACAACAATGAAACGCATCTGCAGGCAGCATGGCATCCCAAGGTGGCCATTTCGCAAGATCAGCAAGGTGAACCGCTCCCTCGACAAGATGAAGCGCGTCATGGAATCCGTGAACTGCTCGCCGTCGCCGCCGGTGGCCATGCCTGCTCACCCAGCTCTTCTTCTCCCTCCGCCGCCGCCGCCACCGCGGCCATGCCTGTCAAGTACCGTAGGAGAGACCTCCTCCCATGGATCATGCCAGGCGCCGCCATCTCACGCCAAAACTGCATTGCGAAAACCTCCGAGGTGCGGCAATGGCGACGGCGTGGTCACCATCAAGGCCAGCCACAGAGGTGACATCATCAGGTTCAGGGTGCCGTGCTCAGCCGGCGTCGCGGCGGTGAAGGCGGTGGTGGCCAAGCGGCTGAGCCTGGACGCCGGCGCCTTCGACGTCAAGTACCTGGACGACGACCACGAGTGGGTGCTTCTGTCCTGCGACGCCGACTTCCAGGAGTGCCTCGACGTCGTCCCGGCATTGCCGTCGATGTCGGTGACGGCGAGGTCAGGCTCCGGAGCGGCGGCTCCGGTGGTCGTCAGGCTGATGGTCCAGGAGGTAGCTGATAACATCGGGAGTTCCTGCGCTAGCTCAGATTAG
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| Protein seq | MVHEMKVFVCMRACAGGSEGGGGGSPGTEEAAAVAVKQRIARALRLYKEAAGDGGGGWMVQVWAPARDGARRVLATRGQPFVLASQCHRLFQYRTVSLTRVFPVGGAAAADEQGLPARAFDATAPEWTPNVQCYGSGEYARISYALIYDIQGSLALPILDPDDASSPLAVLELVTTAPLLRVSGEVANLCNALRAVSLRGAGICNRAAEIVHRDATRAAMAEVSELLITVCEAHKLPLAQTWVRCWSCGGGGEDTEKAALTTAGAPFHLAAGADARGFRDACVEHHLQRGQGLVGTAARAPGGGRLCADVARCSKDDYPLAHYAGMYGLAGCLVLRAELSAAAMADAAAATAGDEEDCVVLELFLPPDCTGVAEQKAAVDAVSATIKQCSGNLKAIVISNLDDLFLDTMADGDHQLRHEMDDLGDDQRCSDEEDLQLLENTNIGELNIHNADQIRNEDPTSQVGKNKTKRGKAEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKVNRSLDKMKRVMESVNCSPSPPVAMPAHPALLLPPPPPPPRPCLSSTVGETSSHGSCQAPPSHAKTALRKPPRCGNGDGVVTIKASHRGDIIRFRVPCSAGVAAVKAVVAKRLSLDAGAFDVKYLDDDHEWVLLSCDADFQECLDVVPALPSMSVTARSGSGAAAPVVVRLMVQEVADNIGSSCASSD |
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| Function | Protein NLP6 [UniProtKB/Swiss-Prot:Q8RWY4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0032400 | OsMH63_02T0032400.1 | Chr02 | 1915678 | 1918436 | - | maker | ||
| CDS seq | ATGCAGGCAGTGTCACTGAGAGGTGCAGGGATTTGCAACCGTGCAGCCGAGATAGTCCATCGAGATGCGACCCGGGCGGCCATGGCCGAGGTATCGGAGCTCCTGATCACGGTGTGCGAAGCTCACAAGCTGCCATTGGCACAGACATGGGTGAGATGCTGGAGCTGCGGCGGCGGCGGCGAGGACACGGAGAAGGCCGCGCTGACGACCGCCGGCGCGCCGTTCCACCTCGCCGCCGGCGCGGACGCGCGGGGCTTCCGCGACGCCTGCGTCGAGCACCACCTGCAGCGTGGCCAGGGGCTCGTCGGCACCGCGGCGCGCGCGCCGGGCGGCGGCCGCCTCTGCGCCGACGTCGCGCGGTGCTCCAAGGACGACTACCCTCTCGCGCACTACGCTGGCATGTACGGCCTCGCCGGATGCCTCGTGCTACGCGCTGAGCTCAGCGCGGCGGCCATGGCGGACGCCGCCGCCGCCACCGCCGGCGACGAAGAGGACTGCGTCGTGCTGGAGCTCTTCCTCCCGCCGGACTGCACCGGCGTCGCGGAGCAGAAGGCGGCGGTGGACGCCGTCTCCGCCACGATCAAGCAATGCTCCGGCAACCTGAAAGCCATTGTGATCAGCAACTTGGATGATTTGTTCTTGGATACTATGGCAGATGGTGATCACCAACTAAGGCATGAAATGGATGATCTTGGAGATGATCAAAGATGCTCGGACGAGGAGGATCTGCAGCTGCTGGAGAACACAAACATTGGTGAGCTTAACATTCACAATGCAGATCAAATCAGAAATGAGGATCCTACATCACAAGTTGGCAAGAACAAGACGAAAAGAGGAAAAGCTGAGAAATCTGTCACTTTGGAGGAGCTGCAGAAACACTTCTCTGGTAGCTTGAAGGATGCTGCAAGAAGCCTCGGTGTATGCCCAACAACAATGAAACGCATCTGCAGGCAGCATGGCATCCCAAGGTGGCCATTTCGCAAGATCAGCAAGGTGAACCGCTCCCTCGACAAGATGAAGCGCGTCATGGAATCCGTGAACTGCTCGCCGTCGCCGCCGGTGGCCATGCCTGCTCACCCAGCTCTTCTTCTCCCTCCGCCGCCGCCGCCACCGCGGCCATGCCTGTCAAGTACCGTAGGAGAGACCTCCTCCCATGGATCATGCCAGGCGCCGCCATCTCACGCCAAAACTGCATTGCGAAAACCTCCGAGGTGCGGCAATGGCGACGGCGTGGTCACCATCAAGGCCAGCCACAGAGGTGACATCATCAGGTTCAGGGTGCCGTGCTCAGCCGGCGTCGCGGCGGTGAAGGCGGTGGTGGCCAAGCGGCTGAGCCTGGACGCCGGCGCCTTCGACGTCAAGTACCTGGACGACGACCACGAGTGGGTGCTTCTGTCCTGCGACGCCGACTTCCAGGAGTGCCTCGACGTCGTCCCGGCATTGCCGTCGATGTCGGTGACGGCGAGGTCAGGCTCCGGAGCGGCGGCTCCGGTGGTCGTCAGGCTGATGGTCCAGGAGGTAGCTGATAACATCGGGAGTTCCTGCGCTAGCTCAGATTAG
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| Protein seq | MQAVSLRGAGICNRAAEIVHRDATRAAMAEVSELLITVCEAHKLPLAQTWVRCWSCGGGGEDTEKAALTTAGAPFHLAAGADARGFRDACVEHHLQRGQGLVGTAARAPGGGRLCADVARCSKDDYPLAHYAGMYGLAGCLVLRAELSAAAMADAAAATAGDEEDCVVLELFLPPDCTGVAEQKAAVDAVSATIKQCSGNLKAIVISNLDDLFLDTMADGDHQLRHEMDDLGDDQRCSDEEDLQLLENTNIGELNIHNADQIRNEDPTSQVGKNKTKRGKAEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKVNRSLDKMKRVMESVNCSPSPPVAMPAHPALLLPPPPPPPRPCLSSTVGETSSHGSCQAPPSHAKTALRKPPRCGNGDGVVTIKASHRGDIIRFRVPCSAGVAAVKAVVAKRLSLDAGAFDVKYLDDDHEWVLLSCDADFQECLDVVPALPSMSVTARSGSGAAAPVVVRLMVQEVADNIGSSCASSD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0032400 | OsMH63_02T0032400.2 | Chr02 | 1915678 | 1918506 | - | maker | ||
| CDS seq | ATGGTCCATGAGATGAAGGTGTTTGTTTGTATGCGTGCGTGCGCAGGTGGGAGCGAGGGAGGGGGAGGGGGATCGCCGGGGACGGAGGAGGCGGCGGCCGTCGCGGTGAAGCAGCGGATCGCGCGGGCGCTGCGGCTGTACAAGGAGGCGGCGGGCGACGGCGGCGGCGGGTGGATGGTCCAGGTGTGGGCGCCGGCGAGGGACGGCGCCCGGCGCGTGCTCGCCACGCGGGGGCAGCCGTTCGTCCTGGCGTCGCAGTGCCACCGCCTGTTCCAGTACAGGACCGTCTCCCTCACGCGCGTCTTCCCCGTCGGCGGCGCCGCCGCCGCCGACGAGCAGGGGCTTCCTGCCAGGGCGTTCGACGCGACGGCGCCGGAGTGGACGCCCAACGTGCAGTGCTACGGCAGCGGCGAGTACGCCCGCATTAGCTACGCGCTCATCTACGACATCCAGGGCAGCCTCGCCCTCCCCATCCTTGACCCCGACGACGCGAGCTCCCCCCTCGCCGTGCTCGAGCTCGTCACCACCGCCCCGCTGCTCCGCGTCTCCGGCGAGGTCGCCAACCTCTGCAACGCTCTTCGGGCAGTGTCACTGAGAGGTGCAGGGATTTGCAACCGTGCAGCCGAGATAGTCCATCGAGATGCGACCCGGGCGGCCATGGCCGAGGTATCGGAGCTCCTGATCACGGTGTGCGAAGCTCACAAGCTGCCATTGGCACAGACATGGGTGAGATGCTGGAGCTGCGGCGGCGGCGGCGAGGACACGGAGAAGGCCGCGCTGACGACCGCCGGCGCGCCGTTCCACCTCGCCGCCGGCGCGGACGCGCGGGGCTTCCGCGACGCCTGCGTCGAGCACCACCTGCAGCGTGGCCAGGGGCTCGTCGGCACCGCGGCGCGCGCGCCGGGCGGCGGCCGCCTCTGCGCCGACGTCGCGCGGTGCTCCAAGGACGACTACCCTCTCGCGCACTACGCTGGCATGTACGGCCTCGCCGGATGCCTCGTGCTACGCGCTGAGCTCAGCGCGGCGGCCATGGCGGACGCCGCCGCCGCCACCGCCGGCGACGAAGAGGACTGCGTCGTGCTGGAGCTCTTCCTCCCGCCGGACTGCACCGGCGTCGCGGAGCAGAAGGCGGCGGTGGACGCCGTCTCCGCCACGATCAAGCAATGCTCCGGCAACCTGAAAGCCATTGTGATCAGCAACTTGGATGATTTGTTCTTGGATACTATGGCAGATGGTGATCACCAACTAAGGCATGAAATGGATGATCTTGGAGATGATCAAAGATGCTCGGACGAGGAGGATCTGCAGCTGCTGGAGAACACAAACATTGGTGAGCTTAACATTCACAATGCAGATCAAATCAGAAATGAGGATCCTACATCACAAGTTGGCAAGAACAAGACGAAAAGAGGAAAAGCTGAGAAATCTGTCACTTTGGAGGAGCTGCAGAAACACTTCTCTGGTAGCTTGAAGGATGCTGCAAGAAGCCTCGGTGTATGCCCAACAACAATGAAACGCATCTGCAGGCAGCATGGCATCCCAAGGTGGCCATTTCGCAAGATCAGCAAGGTGAACCGCTCCCTCGACAAGATGAAGCGCGTCATGGAATCCGTGAACTGCTCGCCGTCGCCGCCGGTGGCCATGCCTGCTCACCCAGCTCTTCTTCTCCCTCCGCCGCCGCCGCCACCGCGGCCATGCCTGTCAAGTACCGTAGGAGAGACCTCCTCCCATGGATCATGCCAGGCGCCGCCATCTCACGCCAAAACTGCATTGCGAAAACCTCCGAGGTGCGGCAATGGCGACGGCGTGGTCACCATCAAGGCCAGCCACAGAGGTGACATCATCAGGTTCAGGGTGCCGTGCTCAGCCGGCGTCGCGGCGGTGAAGGCGGTGGTGGCCAAGCGGCTGAGCCTGGACGCCGGCGCCTTCGACGTCAAGTACCTGGACGACGACCACGAGTGGGTGCTTCTGTCCTGCGACGCCGACTTCCAGGAGTGCCTCGACGTCGTCCCGGCATTGCCGTCGATGTCGGTGACGGCGAGGTCAGGCTCCGGAGCGGCGGCTCCGGTGGTCGTCAGGCTGATGGTCCAGGAGGTAGCTGATAACATCGGGAGTTCCTGCGCTAGCTCAGATTAG
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| Protein seq | MVHEMKVFVCMRACAGGSEGGGGGSPGTEEAAAVAVKQRIARALRLYKEAAGDGGGGWMVQVWAPARDGARRVLATRGQPFVLASQCHRLFQYRTVSLTRVFPVGGAAAADEQGLPARAFDATAPEWTPNVQCYGSGEYARISYALIYDIQGSLALPILDPDDASSPLAVLELVTTAPLLRVSGEVANLCNALRAVSLRGAGICNRAAEIVHRDATRAAMAEVSELLITVCEAHKLPLAQTWVRCWSCGGGGEDTEKAALTTAGAPFHLAAGADARGFRDACVEHHLQRGQGLVGTAARAPGGGRLCADVARCSKDDYPLAHYAGMYGLAGCLVLRAELSAAAMADAAAATAGDEEDCVVLELFLPPDCTGVAEQKAAVDAVSATIKQCSGNLKAIVISNLDDLFLDTMADGDHQLRHEMDDLGDDQRCSDEEDLQLLENTNIGELNIHNADQIRNEDPTSQVGKNKTKRGKAEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKVNRSLDKMKRVMESVNCSPSPPVAMPAHPALLLPPPPPPPRPCLSSTVGETSSHGSCQAPPSHAKTALRKPPRCGNGDGVVTIKASHRGDIIRFRVPCSAGVAAVKAVVAKRLSLDAGAFDVKYLDDDHEWVLLSCDADFQECLDVVPALPSMSVTARSGSGAAAPVVVRLMVQEVADNIGSSCASSD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_02G0032400 | OsMH63_02T0032400.3 | Chr02 | 1915678 | 1918506 | - | maker | ||
| CDS seq | ATGCAGGCAGTGTCACTGAGAGGTGCAGGGATTTGCAACCGTGCAGCCGAGATAGTCCATCGAGATGCGACCCGGGCGGCCATGGCCGAGGTATCGGAGCTCCTGATCACGGTGTGCGAAGCTCACAAGCTGCCATTGGCACAGACATGGGTGAGATGCTGGAGCTGCGGCGGCGGCGGCGAGGACACGGAGAAGGCCGCGCTGACGACCGCCGGCGCGCCGTTCCACCTCGCCGCCGGCGCGGACGCGCGGGGCTTCCGCGACGCCTGCGTCGAGCACCACCTGCAGCGTGGCCAGGGGCTCGTCGGCACCGCGGCGCGCGCGCCGGGCGGCGGCCGCCTCTGCGCCGACGTCGCGCGGTGCTCCAAGGACGACTACCCTCTCGCGCACTACGCTGGCATGTACGGCCTCGCCGGATGCCTCGTGCTACGCGCTGAGCTCAGCGCGGCGGCCATGGCGGACGCCGCCGCCGCCACCGCCGGCGACGAAGAGGACTGCGTCGTGCTGGAGCTCTTCCTCCCGCCGGACTGCACCGGCGTCGCGGAGCAGAAGGCGGCGGTGGACGCCGTCTCCGCCACGATCAAGCAATGCTCCGGCAACCTGAAAGCCATTGTGATCAGCAACTTGGATGATTTGTTCTTGGATACTATGGCAGATGGTGATCACCAACTAAGGCATGAAATGGATGATCTTGGAGATGATCAAAGATGCTCGGACGAGGAGGATCTGCAGCTGCTGGAGAACACAAACATTGGTGAGCTTAACATTCACAATGCAGATCAAATCAGAAATGAGGATCCTACATCACAAGTTGGCAAGAACAAGACGAAAAGAGGAAAAGCTGAGAAATCTGTCACTTTGGAGGAGCTGCAGAAACACTTCTCTGGTAGCTTGAAGGATGCTGCAAGAAGCCTCGGTGTATGCCCAACAACAATGAAACGCATCTGCAGGCAGCATGGCATCCCAAGGTGGCCATTTCGCAAGATCAGCAAGGTGAACCGCTCCCTCGACAAGATGAAGCGCGTCATGGAATCCGTGAACTGCTCGCCGTCGCCGCCGGTGGCCATGCCTGCTCACCCAGCTCTTCTTCTCCCTCCGCCGCCGCCGCCACCGCGGCCATGCCTGTCAAGTACCGTAGGAGAGACCTCCTCCCATGGATCATGCCAGGCGCCGCCATCTCACGCCAAAACTGCATTGCGAAAACCTCCGAGGTGCGGCAATGGCGACGGCGTGGTCACCATCAAGGCCAGCCACAGAGGTGACATCATCAGGTTCAGGGTGCCGTGCTCAGCCGGCGTCGCGGCGGTGAAGGCGGTGGTGGCCAAGCGGCTGAGCCTGGACGCCGGCGCCTTCGACGTCAAGTACCTGGACGACGACCACGAGTGGGTGCTTCTGTCCTGCGACGCCGACTTCCAGGAGTGCCTCGACGTCGTCCCGGCATTGCCGTCGATGTCGGTGACGGCGAGGTCAGGCTCCGGAGCGGCGGCTCCGGTGGTCGTCAGGCTGATGGTCCAGGAGGTAGCTGATAACATCGGGAGTTCCTGCGCTAGCTCAGATTAG
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| Protein seq | MQAVSLRGAGICNRAAEIVHRDATRAAMAEVSELLITVCEAHKLPLAQTWVRCWSCGGGGEDTEKAALTTAGAPFHLAAGADARGFRDACVEHHLQRGQGLVGTAARAPGGGRLCADVARCSKDDYPLAHYAGMYGLAGCLVLRAELSAAAMADAAAATAGDEEDCVVLELFLPPDCTGVAEQKAAVDAVSATIKQCSGNLKAIVISNLDDLFLDTMADGDHQLRHEMDDLGDDQRCSDEEDLQLLENTNIGELNIHNADQIRNEDPTSQVGKNKTKRGKAEKSVTLEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKVNRSLDKMKRVMESVNCSPSPPVAMPAHPALLLPPPPPPPRPCLSSTVGETSSHGSCQAPPSHAKTALRKPPRCGNGDGVVTIKASHRGDIIRFRVPCSAGVAAVKAVVAKRLSLDAGAFDVKYLDDDHEWVLLSCDADFQECLDVVPALPSMSVTARSGSGAAAPVVVRLMVQEVADNIGSSCASSD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.674695 | 11.68057 | 1.2178925 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0136000 | RBH | 0.076285 | 0.0 | 0.489991 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g04340 | RBH | 0.052921 | 0.0 | 0.045621 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0136000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0002820 | RBH | 0.0 | 2.080173 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0002900 | RBH | 0.0 | 0.852484 | 0.146807 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0002840 | RBH | 0.0 | 1.767313 | 0.649110 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0002810 | RBH | 0.000000 | 0.021859 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0002840 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0002750 | RBH | 0.000000 | 0.311114 | 0.135650 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0033500 | RBH | 0.7683345 | 16.8451155 | 2.257684 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0002820 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0002750 | RBH | 0.000000 | 2.394803 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0002820 | RBH | 0.0 | 2.595260 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0002910 | RBH | 0.0 | 0.139738 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0002870 | RBH | 0.0 | 0.536870 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G002850 | RBH | 0.0 | 2.101158 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0002800 | RBH | 0.0 | 0.000000 | 0.0 |
| Os XI: R9311 | R9311 | AGIS | R9311C02g05778 | RBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_02g0028300 | RBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_02g0029600 | RBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_02g0029100 | RBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_02g0028800 | RBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0201810200.01 | RBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0205990600.01 | RBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | Oglab_010275 | RBH | None | None | None |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0205483000.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0205612800.01 | RBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0202023000.01 | RBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0201806200.01 | RBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0201254800.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0201931200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | OsG46G0202048600.01 | RBH | None | None | None |
| Os XI-adm: G630 | G630 | SICAU | OsG630G0201782400.01 | RBH | None | None | None |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0201768200.01 | RBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0205586000.01 | RBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0201778800.01 | RBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0201792400.01 | RBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | OsKY131G0201375400.01 | RBH | None | None | None |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0201814200.01 | RBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0201801800.01 | RBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0201811000.01 | RBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | OsR498G0202920000.01 | RBH | None | None | None |
| Os XI-1B: R527 | R527 | SICAU | OsR527G0203257600.01 | RBH | None | None | None |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0208939000.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0201865200.01 | RBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0201751000.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0201770000.01 | RBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0201796000.01 | RBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0201782400.01 | RBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0201791200.01 | RBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0201828400.01 | RBH | None | None | None |
