Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: YX1_125827_DEL0433510

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Os XI-adm: YX1 | YX1

Os XI-3B2: LIU XU | Os125827RS1

Chr04

31936121

31936806

SV Length:

Query Start:

Query End:

Allele sv Count:

672 bp

29658169

29658840

3

Gene_id	Chromosome	Start	End
OsLiXu_04g0022340	Chr04	29653712	29662738

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
YX1_125827_DEL0433510	Chr04	31936121	31936806	29658169	29658840	672
YX1_127564_DEL0442580	Chr04	31936121	31936806	29157333	29158004	672
YX1_MH63RS3_DEL0430260	Chr04	31936121	31936806	29404029	29404700	672

>YX1_125827_DEL0433510
ctcccttcccctcgctctgcccgcgcgtgcgcgagcgccgcgccgagcgccccctccccctcgctctccttctccccatccctggcgagctccccgcccgcgaagccggcccccgcgcgccgttgttcgcgcgcgcgcccgcgtggttgccacccgtgccgcgccgcctgcgccgtccgcgtcacccggccccgttgccctgccgcgcctgcagccgcttggccccgcagccagcgcgcgtgcccgagccgagccactcaatccgccgcgcctcccgttgcaagccgcgcgcgagagccgtggtggccgaccgcctggtcgccaccatcgtcagcgcctgcccgcgcctgtcgcccgtgtcaccgcctcgccgtcatcaccgtcgtcatcgcctcggccccgccactccgcgcgcaagccgccaagggacggaggcagagcccctcctccctctaccacgtcgcccccgctcccctcctccTtttcccaaagaggcaaggggcgagccccctttctctccctcattttcccctttttccccccgccggcgtcatcctccctccgtcctgtcgccgatttggccgcgagcgccgagcgccagctcgcgccttgaccgcccaaagtcggtttccaaaccgacattgccgccctttaaacccaggcgccctccct