Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Y58S_R498_INS0506640

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr05

10460591

10463589

SV Length:

Query Start:

Query End:

Allele sv Count:

2986 bp

7626276

7629261

23 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Y58S_125827_INS0509050	Chr05	10460591	10463589	7284939	7287924	2986
Y58S_127518_INS0507920	Chr05	10460591	10463589	7378611	7381596	2986
Y58S_127652_INS0516500	Chr05	10460591	10463589	7328677	7331661	2985
Y58S_132424_INS0507730	Chr05	10460591	10463589	7309561	7312546	2986
Y58S_CN1_INS0506950	Chr05	10460591	10463589	7301196	7304181	2986
Y58S_D62_INS0507210	Chr05	10460591	10463589	7248954	7251939	2986
Y58S_FH838_INS0509130	Chr05	10460591	10463589	7542819	7545804	2986
Y58S_FS32_INS0506280	Chr05	10460591	10463589	7223626	7226611	2986
Y58S_G46_INS0507620	Chr05	10460591	10463589	7242724	7245709	2986
Y58S_G630_INS0512110	Chr05	10460591	10463589	7316665	7319649	2985
Y58S_HZ_INS0505620	Chr05	10460591	10463589	7461844	7464829	2986
Y58S_J4155_INS0503960	Chr05	10460591	10463589	7395303	7398288	2986
Y58S_J4155S_INS0503950	Chr05	10460591	10463589	7503236	7506221	2986
Y58S_LK638S_INS0506290	Chr05	10460591	10463589	7361135	7364120	2986
Y58S_R498_INS0506640	Chr05	10460591	10463589	7626276	7629261	2986
Y58S_S548_INS0506830	Chr05	10460591	10463589	7379687	7382672	2986
Y58S_Tumba_INS0508150	Chr05	10460591	10463589	7616785	7619769	2985
Y58S_WSSM_INS0506200	Chr05	10460591	10463589	7452265	7455226	2962
Y58S_XL628S_INS0506360	Chr05	10460591	10463589	7351315	7354300	2986
Y58S_Y3551_INS0506700	Chr05	10460591	10463589	7388934	7391919	2986
Y58S_YX1_INS0506160	Chr05	10460591	10463589	7496119	7499104	2986
Y58S_ZS97RS3_INS0507650	Chr05	10460591	10463589	7306332	7309317	2986
Y58S_MH63RS3_INS0507480	Chr05	10460591	10463589	7462862	7465847	2986

>Y58S_R498_INS0506640
TGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTGAACCCTCGTCCAGGAATCAGCCGAGGCACACAATAACAAATTGATAATAGAGTACAATTATTACTCTAATTAATAAGCGTATAAAATGTCATTACAGAGGTAGATAGTTCCTCTCAATCAATAAAGATCTAAGCAGCGGAAAATAAAATAAACGGCGCAAACGGCTCCACTCCATAGGCAGTTTGACCAGGGCTACACCTAATCCTCCACACCATCAGCTTCACTGTAGAACTCTTCCTCTGATGAATGATTGCAAGGTGAGTATATGATATACTCAGCAAGCCACGCAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAGTAGGGTTTCATTTGCAAAAGCAGCATTTAGCAAACATTTGAGAATTTAATAAAATAGTTAAGTAATTAAACAATATTAATCCAACGCTATACAACATACCCTGTTGTATAGGCCCAACCATTCTGAACAACCATCCCGGCTGCACAGTTCTATCTCCAAACCAGGAATATACCATTCCAAACCAGGAGCTAATCAAATTATTACCAATTAAAGCACCTTTTATTATGATGAGAAGGGTGAGACCAATCACGAAAGACATTGTTAGACCCGCCCATAACCGCGGGCACGGCTATTCGAATAGTTTTACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTTGTGACAATACCCCTTGCATAACACAATCCACTGCAGCGCACCTTCCTGGATCATAATCACCCCCTTATAAACAAGGCATGGACTCCCCAGCGACCCCCGTGGGCTTATCTCCGCCACTTCTCAGTCTGGTGCCCCGCAATGAACCATGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGGTTAATGTTTCACAACCGAAACTCGTGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATGTGCTCACAACCCACCATTACCAGGTTTTAGTTGGCAAATAATTAATTAACAAATCACGATTGGCCATCGTGAACTATCATTAAGCCATCATTAAATTATAGTGATTCATAAGTTATCCCAATAGTGTGCTAATGTTTCTAAGCAGGGCTAAGCAATTATATCTAATACATCTAGTTGAACCAACATATAGAGCTCAACTAGTCAAGTTATAATAACCCAAGGTATCAAGGAATAAGGTAATCAAGAACAAAAGGGCTATAACAAACAATAGGTTAATTCCACCCAATGACATTCGAAAATAAATGCAATAGTTGAAAAGAAACAATAGCTTTAAATAGGATCAACATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGCTGGCCTTGGAACTCTTCAAACTCTTCTCCGGCGAAAACGGACTCTCCGGAAACGACGGAATCTAAGCAGAAAGAAGCAAAATCACCAAAACAGCACATAAACAAGCATGAACAGTACATGTGGATATTTTTAACATGTAGATCTCAATTTTAGAAAAATTTAGAGACTTAAACCAACTAAATCGGAGCTAAGATGAATTAGTTATGAATTTTTAAAAGATTAAATCGGATTAAAACACTTAAATTGATTTTGATTGAATTATGACGCAATAATGAATTATTTTTGAAAAGGAAAAGAGGATTTATTGCGTCAGCGGCTAGGGTTTCGGTGGACCGGACGCACGGGCGACGGCTCACGCGAACGGACGGCCGAGATCGACTTGATCCAAAACGGACGGCCGAGATCGAACGGTCCACGACCGGCTCACAGCGAACGGCCCCGATGACGTCGGCGATGACGTCACCACCGGCGGCGGCGGCTCGGGCTTGCATGCTCGCCGGCGAACGACGGCACGGCGGCGCGAACGGAAGGCACCAACAGGTAGAGCGCAATGCGGCGAACTCACCGGTGACCAAAAGAGCGGCGGAAGATCAACAGACGGCGACGGCGACGAGGAGGAAGCGGCGGCAAACTTCGGGTCGACGGCGGCGACGGTGCTCCGGCGGTCTTCGGCGGCGGCGAAGGAGCGGACGAGAACGGCGGCAACTTGGCGATCACGACGGTGGCCTTGCCGAGCGATGATGACGACCGAGACGGCGGCGGCGCACGGCTGGAGCGACGGCTACGACGGCGGCGCTAGGTTGCACGGCGCTAGAACTCTTCCGGCGACGAGAGGCGAAGGCGAAGGTGGCGACGGGTAGAGGAGACACCGGGGAACCTTTTAAAGGGGCTCGGAGGCGACGGCGAAGGCCCACGGCGACTGGCGACGAGAAGGAAGGTTTAGGGTTCGGAGGAGAGAGACGAATCCGATTCGAACTCGATTCCAACGATTTCCAAAACGAATTAGCCGATGTTTCCAAAAGAGAAAAGGTAGAGGAAATCCCGGAGATTGTTTCCCCTCTATCAATTCGGCCGGAAACGGAAAGGATCGATCGAATTTGGAAGGGAACGGCGGCGGCGCGAAACTAGGGTTTCGGGCGGCGGCGGCCGGAGATTGACGACGACCCTGACAGGTGGGCCCCACCTGTCAGCGGGCGGATGCGCGCGCGCGCGGCGGCGGACTGGGCCGGACTGGGCCGAGGAGAGAGAGAGAGCGGTTTTGGGCCGACTTTCGGCCCAAAGCCAAAAGAGACTTTTTAAAACCTTTTTCAATTTAAATTATTCATGAAATGCAATTCCATTTATTAAAAATACTTCCTTAGCTCAAATAAATCCCAGAAAAATCTAGGAATTATAGAATTAAGCAAAGTATTTAATGAAATTTTATCTGGCCCCATTTTATATTGGAATTTATTAATTAAAAAATTAGATCTTCTCTTCAAGACTTTTAAAATTATTTCTAAAAATTCCAATTAAACAACCATTTATATATTTTGAATTTTTAGGGTGTGACAAA