Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Y58S_127518_INS0440540

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-1B: Y58S | Y58S

Os XI-3B1: KHAO YAI GUANG | Os127518RS1

Chr04

33586049

33586734

SV Length:

Query Start:

Query End:

Allele sv Count:

673 bp

28881209

28881881

7

Gene_id	Chromosome	Start	End
OsKYG_04g0021830	Chr04	28876755	28885779

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Y58S_127518_INS0440540	Chr04	33586049	33586734	28881209	28881881	673
Y58S_FS32_INS0442610	Chr04	33586049	33586734	28420545	28421216	672
Y58S_G46_INS0447880	Chr04	33586049	33586734	27887219	27887890	672
Y58S_LK638S_INS0443140	Chr04	33586049	33586734	28837896	28838569	674
Y58S_TM_INS0445060	Chr04	33586049	33586734	27029575	27030246	672
Y58S_Tumba_INS0449650	Chr04	33586049	33586734	29350650	29351321	672
Y58S_Y3551_INS0437030	Chr04	33586049	33586734	29144344	29145016	673

>Y58S_127518_INS0440540
CTCCCTTCCCCTCGCTCTGCCCGCGCGTGCGCGAGCGCCGCGCCGAGCGCCCCCTCCCCCTCGCTCTCCTTCTCCCCATCCCTGGCGAGCTCCCCGCCCGCGAAGCCGGCCCCCGCGCGCCGTTGTTCGCGCGCGCGCCCGCGTGGTTGCCACCCGTGCCGCGCCGCCTGCGCCGTCCGCGTCACCCGGCCCCGTTGGCCCTGCCGCGCCTGCAGCCGCTTGGCCCCGCAGCCAGCGCGCGTGCCCGAGCCGAGCCACTCAATCCGCCGCGCCTCCCGTTGCAAGCCGCGCGCGAGAGCCGTGGTGGCCGACCGCCTGGTCGCCACCATCGTCAGCGCCTGCCCGCGCCTGTCGCCCGTGTCACCGCCTCGCCGTCATCACCGTCGTCATCGCCTCGGCCCCGCCACTCCGCGCGCAAGCCGCCAAGGGACGGAGGCAGAGCCCCTCCTCCCTCTACCACGTCGCCCCCGCTCCCCTCCTCCTTTTCCCAAAGAGGCAAGGGGCGAGCCCCCTTTCTCTCCCTCATTTTCCCCTTTTTCCCCCCGCCGGCGTCATCCTCCCTCCGTCCTGTCGCCGATTTGGCCGCGAGCGCCGAGCGCCAGCTCGCGCCTTGACCGCCCAAAGTCGGTTTCCAAACCGACATTGCCGCCCTTTAAACCCAGGCGCCCTCCCT