Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Tumba_IR64_INS1208470

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr12

9376450

SV Length:

Query Start:

Query End:

Allele sv Count:

376 bp

9033696

9034071

19

Gene_id	Chromosome	Start	End
OsIR64_12g0008760	Chr12	9031300	9039444

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Tumba_117425_INS1214380	Chr12	9376450	9376450	9276570	9276945	376
Tumba_125827_INS1211360	Chr12	9376450	9376450	9127620	9127995	376
Tumba_127564_INS1210000	Chr12	9376450	9376450	9067563	9067938	376
Tumba_127652_INS1213640	Chr12	9376450	9376450	9150737	9151112	376
Tumba_132424_INS1210190	Chr12	9376450	9376450	9106269	9106644	376
Tumba_Basmati1_INS1215850	Chr12	9376450	9376450	9871354	9871729	376
Tumba_CN1_INS1210130	Chr12	9376450	9376450	9110219	9110594	376
Tumba_D62_INS1209790	Chr12	9376450	9376450	9218363	9218738	376
Tumba_FS32_INS1209420	Chr12	9376450	9376450	9144316	9144691	376
Tumba_G8_INS1207900	Chr12	9376450	9376450	9186867	9187242	376
Tumba_HZ_INS1208680	Chr12	9376450	9376450	9071106	9071481	376
Tumba_IR64_INS1208470	Chr12	9376450	9376450	9033696	9034071	376
Tumba_J4155_INS1210230	Chr12	9376450	9376450	9308963	9309338	376
Tumba_J4155S_INS1210500	Chr12	9376450	9376450	9276469	9276844	376
Tumba_R527_INS1208460	Chr12	9376450	9376450	8963015	8963390	376
Tumba_S548_INS1208340	Chr12	9376450	9376450	9191125	9191500	376
Tumba_TM_INS1211020	Chr12	9376450	9376450	9112572	9112947	376
Tumba_WSSM_INS1209550	Chr12	9376450	9376450	9011595	9011970	376
Tumba_Y58S_INS1210490	Chr12	9376450	9376450	9270236	9270611	376

>Tumba_IR64_INS1208470
AGGCCTGTTTGGTTGGGGGGAGTTTTTAGAAGGGATTGGGAGTTTAGAGGGTTGAGGCTATTAAGTGTTTTATTTTGTTGGGAGACATGACAATTTTGGTGGAATGGGGATGGGGAATTGAGCAAGGAACTCCTTCCTTTTCAACATCTGGGTAGGGGCAGGTAATTGGGAGGGAAGTCCTCCTTTACTTTTTCTAAGCAAATCTCAGCCATCCATTTTTATTAATGACCTAATCTCCAACTAAACTCTCTATCAATTTCCATCACCTCTACCAAACAAGATATTAAGATTAAAAATCAAATTCCCATCTTAATCTCATCATCAATTTCCTCGTGTAAACTCCCAATCCCCTTCCCTCGAGTTACCAAACAAGCCG

Variation ID: Tumba_IR64_INS1208470

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-3: Tumba | Tumba

Os XI-1B1: IR 64 | OsIR64RS1

Chr12

9376450

9376450

SV Length:

Query Start:

Query End:

Allele sv Count:

376 bp

9033696

9034071

19