Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: S548_127564_DEL0447580

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr04

32469949

32470634

SV Length:

Query Start:

Query End:

Allele sv Count:

672 bp

29157333

29158004

5

Gene_id	Chromosome	Start	End
OsLima_04g0022000	Chr04	29152874	29161903

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
S548_125827_DEL0437570	Chr04	32469949	32470634	29658169	29658840	672
S548_127564_DEL0447580	Chr04	32469949	32470634	29157333	29158004	672
S548_FH838_DEL0446560	Chr04	32469949	32470634	28797470	28798141	672
S548_G630_DEL0435170	Chr04	32469949	32470634	28922781	28923452	672
S548_MH63RS3_DEL0413670	Chr04	32469949	32470634	29404029	29404700	672

>S548_127564_DEL0447580
CTCCCTTCCCCTCGCTCTGCCCGCGCGTGCGCGAGCGCCGCGCCGAGCGCCCCCTCCCCCTCGCTCTCCTTCTCCCCATCCCTGGCGAGCTCCCCGCCCGCGAAGCCGGCCCCCGCGCGCCGTTGTTCGCGCGCGCGCccgcgtggttgccacccgtgccgcgccgcctgcgccgtccgcgtcacccggccccgttgccctgccgcgcctgcagccgcttggccccgcagccagcgcgcgtgcccgagccgagccactcaatccgccgcgcctcccgttgcaagccgcgcgcgagagccgtggtggccgaccgcctggtcgccaccatcgtcagcgcctgcccgcgcctgtcgcccgtgtcaccgcctcgccgtcatcaccgtcgtcatcgcctcggccccgccactccgcgcgcaagccgccaagggacggaggcagagcccctcctccctctaccacgtcgcccccgctcccctcctccttttcccaaagaggcaaggggcgagccccctttctctccctcattttcccctttttccccccgccggcgtcatcctccctccgtcctgtcgccgatttggccgcgagcgccgagcgccagctcgcgccttgaccgcccaaagtcggtttccaaaccgacattgccgccctttaaacccaggcgccctccct