Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: R9311_Y3551_DEL1203360

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr12

5813993

5814739

SV Length:

Query Start:

Query End:

Allele sv Count:

747 bp

5550401

5551147

4 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
R9311_FH838_DEL1203470	Chr12	5813993	5814739	5550078	5550824	747
R9311_R498_DEL1202910	Chr12	5813993	5820094	5562551	5565783	3233
R9311_Y3551_DEL1203360	Chr12	5813993	5814739	5550401	5551147	747
R9311_MH63RS3_DEL1203390	Chr12	5813993	5814739	5553643	5554389	747

>R9311_Y3551_DEL1203360
AAACGCCTTAGCCGTGGTATTATAGGGAAATACCACATCACCTTAGCAGGAATTCTCTTCTTCGTTAGCTGCCCGTCAACCTCACCTGGATCATCTCGTCTAATCTTGTATCGTAGTGCTTTACAAACAGCGCATGCTTCTAGGTTCTCGTACTCCTCACCACGATATAGGATACAATCATTCGGACATGCGTGAATCTTCTGAACTTCCAGTCCTAGAGGGCAGACTATCTTCTTAGCCTCGTACGTTGTCTCGGGCAATTTGTTTCCCTCCGGAAGAATGTTCTTGACGAGTTTCAATAAATCGCCAAATGCCTTGTCACTACCACCATTTTTTGCCTTCCATTGCAAGAACTCCAGAGTGGTATCCAACTTTTTGTGCCCCTGCTCGCAACCTGGGAAAAACGACGTTCTGTGATCCTCTAACATCTTGTCCAATTTATGGGCCCCCTTTTCACTTTCGCAGTCCTCCTTGGCATCCTGCAACATCTGACCAAGATCATCTGCAACGTCGTTATAATCAGCATCTCTATCCTCCTCGCCCGTTTGATTTCCTTCAGATCCAGCGTACTGAGCAAAGTCTAGAATATTGTCGTCTTCCACTTCATCTTTTTCCATTTCAACCCCTTGCTCTCCGTGGGATGTCCAACAATTATAGCTTGGCATGAACCCCGACTCAAACAAGTGGAAATGAATAGTCCTGGATGCAGAATACTCCTTCTGATTCTTACACTTATTGCATGGACAA