Variation ID: OglaRS2_II32_INS0456290

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os O.glaberrima: OglaRS2 | OglaRS2
Os XI-1A: II32 | II32
Chr04
24354900
24354907
SV Length:
Query Start:
Query End:
Allele sv Count:
3793 bp
28835274
28839066
31
There is no gene in this region.
SV_id Chromosome ref_start ref_end query_start query_end length
OglaRS2_117534_INS0454870 Chr04 24354900 24354907 26886632 26890428 3797
OglaRS2_125827_INS0452260 Chr04 24354900 24354907 29653809 29657605 3797
OglaRS2_127518_INS0452490 Chr04 24354900 24354907 28876852 28880648 3797
OglaRS2_127564_INS0455710 Chr04 24354900 24354907 29152971 29156769 3799
OglaRS2_127652_INS0458550 Chr04 24354900 24354907 27502166 27505949 3784
OglaRS2_127742_INS0455800 Chr04 24354900 24354907 28906676 28910472 3797
OglaRS2_132424_INS0453700 Chr04 24354900 24354907 29788826 29792622 3797
OglaRS2_CN1_INS0455160 Chr04 24354900 24354907 28303946 28307742 3797
OglaRS2_D62_INS0455720 Chr04 24354900 24354907 28336503 28340297 3795
OglaRS2_DG_INS0455650 Chr04 24354900 24354907 28723380 28727176 3797
OglaRS2_FH838_INS0456740 Chr04 24354900 24354907 28793110 28796906 3797
OglaRS2_FS32_INS0454480 Chr04 24354900 24354907 28416185 28419981 3797
OglaRS2_G46_INS0455120 Chr04 24354900 24354907 27882859 27886655 3797
OglaRS2_G630_INS0454610 Chr04 24354900 24354907 28918421 28922217 3797
OglaRS2_G8_INS0455530 Chr04 24354900 24354907 28615893 28619686 3794
OglaRS2_HZ_INS0455850 Chr04 24354900 24354907 29078343 29082139 3797
OglaRS2_II32_INS0456290 Chr04 24354900 24354907 28835274 28839066 3793
OglaRS2_IR64_INS0450890 Chr04 24354900 24354907 27264199 27267995 3797
OglaRS2_LK638S_INS0455750 Chr04 24354900 24354907 28833536 28837332 3797
OglaRS2_R498_INS0455390 Chr04 24354900 24354907 27798860 27802656 3797
OglaRS2_R527_INS0456520 Chr04 24354900 24354907 28379521 28383317 3797
OglaRS2_R9311_INS0455840 Chr04 24354900 24354907 28987429 28991225 3797
OglaRS2_S548_INS0456080 Chr04 24354900 24354907 27860578 27864374 3797
OglaRS2_TM_INS0453910 Chr04 24354900 24354907 27025215 27029011 3797
OglaRS2_Tumba_INS0454080 Chr04 24354900 24354907 29346291 29350086 3796
OglaRS2_WSSM_INS0456140 Chr04 24354900 24354907 28467599 28471394 3796
OglaRS2_XL628S_INS0456020 Chr04 24354900 24354907 28960664 28964460 3797
OglaRS2_Y3551_INS0456220 Chr04 24354900 24354907 29139984 29143780 3797
OglaRS2_YX1_INS0455590 Chr04 24354900 24354907 27362256 27366052 3797
OglaRS2_ZS97RS3_INS0457060 Chr04 24354900 24354907 29174609 29178405 3797
OglaRS2_MH63RS3_INS0453950 Chr04 24354900 24354907 29399669 29403465 3797

>OglaRS2_II32_INS0456290
GGCGACGGTTAGGGCTGTCAAAAAAGCTCGGAGCTCGCGAGCAGCTCGAGCTCGGCTCGAGTTCGACTCGGCAAGGATTCGAGCCGAGCTCGAGCTTGTCTCGAAGCTCGCGAGTTCTACCGAGACGAGCTCGAGCTATTCGGCAGAAGCTTGAAATTTTCACTCCCGCTACCCATCCCAATTTCTCCCGCACTCCAATTCCAAAATCCTACCACCAACAGAAGTCCATCACCTAACCATTTATTTCCCTTATATCCCCATCCCGTATCCAAACCCTAGCTCATTTGCTCTCTTCCTCGAAACATTTCTCTTCTAGATCTACAATCCTAGGCTGCTCTAGTGCTCCACTGACCACTGCTGTGGATCTAGCCAAGCACCGTCCATCCTTCGCCTCTCCTGTCCAGGAAGAACCCCATGGAGGACAGCAGCAGCCCACCGCCTCCACCGTGAGTGACGAACCGACGACTCGGATCTGAGTAAGTTTCCTCTTCTTTCTTTGTTTTACATTTTTATTTCTTTTGCACCCACATGTATCTAGGCCCTACATGTATTAACTGTGTAGTGTTTAGTTGCTTGATGGATGTTATTGATTTACATTGAATTTTATGGACTAGGTGGAGACATGGAGTAGTACTTATCTTGCTGTTCTCCTCTTCTGAAGAAAGACTGAAGGTTGCAGAACACCGTGTGTTTGCCATTTGCCAAGGTAAATTGATGGCAATGCTTTTCTTGTTGTACTTGTTTGATTCCTTCCCTTGTGCAGAATATATATTGATAGCAGTTGGTATTTTTATTTTTTGTAGATGTCTGTAAACCTACAAAGACAGCTATCTATAGAGATCGAGTCACCGAGCAATAGGGATGGCATAGCAGCAACAGAAGCACAACCGAATCAGCAGCTAGTACCAGGTGAAGTAAGGGGAGAAGAGGGCCAAGAGGGAAACCCAACTAAAGCCACCAGGAAAAGAAATCTCCATTGTGGGATTTCTTTGAAGAATGCACTGTGCCATCAAAGAAGAAGAAAGGAGAAATGGAAAATAAGGTCAAATGTAAGGCATGTGAAACTCTGCTCACCAAGAATAGTAGTGGCACTACAACACATTGGCGGAGGCATTTAGAGCAGTGTGATTATCACAAGCTTCAACAAAATCCATAAAACAACAGAATATCAATTTCCCTAGCCTTGATGAAGGTGATGTTGATCTTGATGCTCCTTGTGTTTCTGTCCCTGGTTATTATGATCCTACAAAGATACGTGAGCTTATTTGCAAAATGATCATTGTCCATGAGTTGCCATTTTGCCTTGTGGAGTATACATGGTTTAATGTTTTGCTAAAGAGGCTAAACCCTTCTTACAAAAAGGTCTCTAGAAATACCATTAGAAGTGATTGTATGAGGCTTTATGAATCTGAAAAAGAAAAACTGAAGAGGACTTTCAAAGATGTTAGAAAGATAAGCATCACATGTGATCTTTGGACCTCTAACCAAACAATTTGCTACATGAGCCTTGTTGCCCACTACATAGATGCTGATTGGTCAATGCATTGTCGTGTTATTAACTTTCTTGAGTTGGAGCCTCCACATAATGGTGTAGTTATTGCTAATGCCATTTCTGATTGTCTTGCTTCATGGAGAATTGAGGACAAGATAGCTAGCATCACATTTGACAATGCCTCAAGTAATGACAGTGCTGCTAACCTGTTGCTTGCCAAGTTTACAAAACGTGGTTCACTTTGGTTTTATGGAAAATTCCTTCATATCCGCTGTTGTGCTCACATTCTGAACTTAATTGTCCAAGATGGTCTGGCTGTGATTAAGCATATAATTGACAAAGTTAGGGACACTATCAAGTACATCAGAAATCAAACAATCGAGCATACAAGTTCAGTGCTGATATTGATTCTCTCAACCTTAAAAGTGACATGGGTTTGGCTATTGATTCCTGCACAAGGTGGGGCTCAACCTTCAAAATGCTGCAATCTGCATTTTTTTATAGGTCTGCCTTGGATGTATATGCTGCAGGAGATGCAAACTATAGGTGGCTGCCAACACCAGAGGAATGGAATCTATATTGTGAAGTCAATGATGCCCTTTCTGTCATTCATGCAGCCACTGAGGAGTTCTCAGGTTCAACCTACCCAACATCTAACTTTTTTTATTCTCACATTGTCGATATTAAGAGAGTACTAGGTCAGTTGTTGAAGTCCAAAGACCCAATTCTTAAAGAAATGGCAAATGCAATGCTTGAAAATTTTGAGAAGTACTGGGGCCCAGAATGCAATACTTTGTTTGCAGTTGCTTTGGTTCTAGACCCAAGGTTTAAGATGGGTATGATTAACTACACATTCCCTGCTTTGTATGAAGAAACTGTACTTCCTAAGAAACTTGCAAATGTGGAATCCACATTGAAATCTTTGCATGCATCATATGAAAGTGAACTCCAGAGCACATCAAAGGAAAATGATGCCACCACTCAATCTACTAGTACATCTCTGGGCACTACTAGTAGTCATTTCTCTGCTGCTAGCCAATTTCATGAGTATATGAAATCAAAGAATGCTGCTAGTCTTCCTAAGTCAGATTTAAAGAGGTACTTAGATGATCCTGTTGAGGATATTCCTGCAAAAAGTTTCAATCTACTTCAGTGGTGGAGGATGAATGAATTAAAGTATCCAATTGTGGCAAAGTTGGCCAAGGATATTCTTACTATTCCCATCACCTCAGTCTCATCTGAATCAGCTTTCAGCAGAGGGGGTAGAGTGATTAGTGATTATCGCAGCTCTTTACTCCCATCAACAGTACAAGCTTTGGTGTGTACATCTAGTTGGATTAGAGGAGGCCACCACAAAAGCACATATTTAGTAAGTTCTTATATTTTCATGTTTCTAACCAATTAATAGAGATACACAATCTAATAATCTATGTTTACTTGTTTGTTGCATACTAGGAGAATGATACTAATTCTATTATCCTTGTCCCAACTCAAGCTTCAACTGCAAATTCGGTTGTGGGCAGCAATTAGACTCGTTTGTCAGGTATATGTTTGAGGTTATATAAATTATCTATTGCTACCATATCAATTCCTCATCACTGATGAAACATTACCTATAATCTTTGCACATGGTTTCAGATATAACTTTACGAAACATTAATGCATGCATATAGCATAGCATCAACAATTAGTTTGAAGAAAGTGCTTGGAGGTTTCACATTGGCGTACTGCCATTGCCAATAGTGGAGTAAATATTTTGTGACAGTTGAAATTTGAAGTACGCTGTGTTAGTAGTATAAGTAATATTTAGATATTAGAGCTTTTAGATGGAACATATGTTGGGAACTTCCGGTGGGCTACTTTTGATGTTAATTGATGCTCTATGTTCTGTCAAGTCATTGACACATGATATTGTAATGTTTCTTATGGTGTTAGACACACCGGTCTATTATAAAGTAGTAATCCTATTATGACTTATGCACTACTATGAATTTGTAATCTTTCTAGTATATACCTGTCGAGAAGCTATTATATTCTATTATGAATTTGTAATCCTACTTTGGCTTGTTAAGAAGCTTTTATTGGGAGATAAGTTCAGATTGCTGAAGGAAACAGTCTTAACGAGCTTCTACGAATCGAGCTCGAGTCGAGCCGAGCCTTGATCGAGCTCGAACCGAGCCTACCTTCAAGATCGAAGGTAATGCTGGGCTCGGCTCGAGCTCGGCTCGAGCCTGTACTGAGCTCGAGCTTAGGTAGGTAAGCTCGCTCGAGCTCAGCTCGTTGACAGCCCTAGCGACGGTG

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.