Variation ID: Nipponbare_XL628S_INS1141170

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
INS
Os GJ-temp: Nipponbare | IRGSP 1.0
Os XI-adm: Xiangling628S | XL628S
Chr11
21920847
21921119
SV Length:
Query Start:
Query End:
Allele sv Count:
273 bp
13177426
13177698
42
Gene_id Chromosome Start End
OsXL628S_11g0133200 Chr11 13172196 13177722
SV_id Chromosome ref_start ref_end query_start query_end length
Nipponbare_02428_INS1119080 Chr11 21920847 21921119 12171560 12171832 273
Nipponbare_117425_INS1122020 Chr11 21920847 21921119 11739194 11739466 273
Nipponbare_117534_INS1137480 Chr11 21920847 21921119 12713497 12713769 273
Nipponbare_125619_INS1142000 Chr11 21920847 21921119 12683809 12684081 273
Nipponbare_125827_INS1141400 Chr11 21920847 21921119 13686461 13686733 273
Nipponbare_127564_INS1140650 Chr11 21920847 21921119 12543818 12544090 273
Nipponbare_127652_INS1143870 Chr11 21920847 21921119 12516186 12516458 273
Nipponbare_127742_INS1139750 Chr11 21920847 21921119 13365765 13366037 273
Nipponbare_128077_INS1124760 Chr11 21920847 21921119 12250821 12251093 273
Nipponbare_132278_INS1117390 Chr11 21920847 21921119 11970379 11970651 273
Nipponbare_132424_INS1142810 Chr11 21920847 21921119 12600889 12601161 273
Nipponbare_Azucena_INS1118670 Chr11 21920847 21921119 12242892 12243164 273
Nipponbare_Basmati1_INS1122950 Chr11 21920847 21921119 12492889 12493161 273
Nipponbare_CN1_INS1140300 Chr11 21920847 21921119 14182787 14183059 273
Nipponbare_D62_INS1130370 Chr11 21920847 21921119 12461525 12461797 273
Nipponbare_DG_INS1141670 Chr11 21920847 21921119 14769973 14770245 273
Nipponbare_DHX2_INS1111970 Chr11 21920847 21921119 11895123 11895395 273
Nipponbare_FH838_INS1143340 Chr11 21920847 21921119 14372824 14373096 273
Nipponbare_FS32_INS1133270 Chr11 21920847 21921119 12627347 12627619 273
Nipponbare_G46_INS1140750 Chr11 21920847 21921119 13221211 13221483 273
Nipponbare_G630_INS1141520 Chr11 21920847 21921119 13624151 13624423 273
Nipponbare_G8_INS1140850 Chr11 21920847 21921119 12705154 12705426 273
Nipponbare_HZ_INS1143720 Chr11 21920847 21921119 13137049 13137321 273
Nipponbare_II32_INS1141920 Chr11 21920847 21921119 14245140 14245412 273
Nipponbare_J4155_INS1139630 Chr11 21920847 21921119 12500567 12500839 273
Nipponbare_J4155S_INS1140870 Chr11 21920847 21921119 13151288 13151560 273
Nipponbare_Lemont_INS1121760 Chr11 21920847 21921119 12285856 12286128 273
Nipponbare_LK638S_INS1140750 Chr11 21920847 21921119 13183338 13183610 273
Nipponbare_R498_INS1140830 Chr11 21920847 21921119 13117322 13117594 273
Nipponbare_R527_INS1139070 Chr11 21920847 21921119 13412562 13412834 273
Nipponbare_R9311_INS1141730 Chr11 21920847 21921119 13295787 13296059 273
Nipponbare_S548_INS1140310 Chr11 21920847 21921119 13318535 13318807 273
Nipponbare_TM_INS1141030 Chr11 21920847 21921119 14096915 14097187 273
Nipponbare_Tumba_INS1136300 Chr11 21920847 21921119 13149702 13149974 273
Nipponbare_WSSM_INS1141580 Chr11 21920847 21921119 12922511 12922783 273
Nipponbare_XL628S_INS1141170 Chr11 21920847 21921119 13177426 13177698 273
Nipponbare_Y3551_INS1137490 Chr11 21920847 21921119 12996771 12997043 273
Nipponbare_Y58S_INS1136040 Chr11 21920847 21921119 13883279 13883551 273
Nipponbare_YX1_INS1141090 Chr11 21920847 21921119 12887229 12887501 273
Nipponbare_ZH11_INS1108870 Chr11 21920847 21921119 12108505 12108777 273
Nipponbare_ZS97RS3_INS1140950 Chr11 21920847 21921119 13284100 13284372 273
Nipponbare_MH63RS3_INS1141170 Chr11 21920847 21921119 13397335 13397607 273

>Nipponbare_XL628S_INS1141170
CCAGGAATCAACACATGCTCACATAAGCCACTGGCAGTGTTGCTTCCATTTTGTTCTAGGACTACTACATGCTTACAGGAGCATAGAGCCCTGATAACTTGGCAAAGACGAACCAGAATTTTAAACAGTTAGAAAATGTCATACAACATAAGACAATATGCACAATTTATCTTATGAATACTGAACATGTGTACCTAATTGAAGAAATGGCACAAAGAAAATGTCACAACCTTTTTGCTGTGATGGAGGAGGTTCTTGAGTATTCCAAGCAGC

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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