Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: NamRoo_Y3551_OTH1122170

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

OTH

Chr11

11786590

11787799

SV Length:

Query Start:

Query End:

Allele sv Count:

1001 bp

12862234

12863234

2 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
NamRoo_R527_OTH1122910	Chr11	11786590	11793165	13520652	13170790	349863
NamRoo_Y3551_OTH1122170	Chr11	11786590	11787799	12862234	12863234	1001

>NamRoo_Y3551_OTH1122170
GGGGGGAGAGAGAGACAAAAAGGAGGGATGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTTCGAAGTTCTGATGGGATCCGGTGCTTTAGTGCTGGTATGATCGCATCCGACATGCTTTGGCGTCATTCGGGTGTCATTTCTTAAAATAGGCGTAACTTTCTCATACGGACTCGGAATCAGGCAAATGATATATCCACGGACATCTACAGACATCTACAGAAAATGTTACATCCGATTCTCCCTAGCTCTCGCCCAAGGGGCGATACAACACGAGGGACGCAGCGGCGCGAGTCAAAAGGGGGGAGAGAGAGACAAAAAGGAGGGATGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTTCGGAGTTCTGATGGGATCCGATGCTTTAGTGCTGGTATGATCGCATCCGACATGCTTTGGCGTCATTCGGGTGTCATTTCTTAAAATAGGCGTAACTTTCTCATACGGACTCGGAATCAGGCAAATGATGTATCCACGGACATCTACAGAAAATGTTACATCCGATTCTTCCCAGCTCTCGCCCAAGGGGCGACACAACACGAGGGACGCAGCGGCGCGAGTCAAAAGGGGGGAGAGAGAGACAAAAAGGAGGGATGCAACACGAGGACTTCCCAGGAGGTCACCCATCCTAGTACTACTCTCGCCCAAGCACGCTTAACTTCGGAGTTCTGATGGGTTCCGGTGCTTTAGTGCTGGTATGATCGCATCCGACATGCTTTGGCGTCATTCGGGTGTCATTTCTTAAAATAGGCGTAACTTTCTCATACGGACTCGGAATCAGGCAAATGATATATCCACGGACATCTACAGAAAATGTTACATCCGATTCTCCCCAGCTCTCGCCCAAGGGGCGACACAACACGAGGGACGCAGCGGCGCGAGTCAAAAGGGGGGAGAGAGAGACAAAAAGGAT