Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: LJ_127742_INS0401550

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-adm: LJ | LJ

Os XI-1B2: PR 106 | Os127742RS1

Chr04

869987

870295

SV Length:

Query Start:

Query End:

Allele sv Count:

308 bp

28910757

28911064

7

Gene_id	Chromosome	Start	End
OsPr106_04g0022670	Chr04	28906579	28916265

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
LJ_127742_INS0401550	Chr04	869987	870295	28910757	28911064	308
LJ_HZ_INS0401630	Chr04	869987	870295	29082424	29082731	308
LJ_R498_INS0401600	Chr04	869987	870295	27802941	27803248	308
LJ_R527_INS0401580	Chr04	869987	870295	28383602	28383909	308
LJ_S548_INS0401580	Chr04	869987	870295	27864659	27864966	308
LJ_XL628S_INS0401530	Chr04	869987	870295	28964745	28965050	306
LJ_YX1_INS0401540	Chr04	869987	870295	27366337	27366644	308

>LJ_127742_INS0401550
tgtagcgcccgttccgtcgtggcgcctagcgggaaaattatctcttaaaaaccctaattgcgaaatttgtttctttgcttgttgtctagtgtccgtgccatctcaagatctcaaatccccgatatatcgtcgagttcaattccgaatctaaatccttccaaatcaaatccctccgcaaaagtctattttgcctcccccggggtcgatgggccgaatctctttcggcccatctccccctccctctcggcgctctctctctctctctctctctctctccctctctcccttcccctcgctctgcccgcgcg