Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: LJ_127564_DEL0453210

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

DEL

Chr04

27352494

27353200

SV Length:

Query Start:

Query End:

Allele sv Count:

708 bp

29160227

29160934

4

Gene_id	Chromosome	Start	End
OsLima_04g0022000	Chr04	29152874	29161903

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
LJ_127564_DEL0453210	Chr04	27352494	27353200	29160227	29160934	708
LJ_127652_DEL0456480	Chr04	27352494	27353202	3991354	3992062	709
LJ_FS32_DEL0449410	Chr04	27352494	27353200	1032905	1033614	710
LJ_Tumba_DEL0454990	Chr04	27352494	27353200	1006735	1007444	710

>LJ_127564_DEL0453210
cttgtgaaattgctgttgtggaaaggggttcgatgtttgaaaaatctgcagctgatgggatcagctaggcccgggtggccgtttgaaagttgttggcccgggtggccgtttgaaaagctgttggccgggtgccaaccttgattcaattctaaagactgatacattgcacatactccgaccggacaagacgcactgtcttatccgtgtcgtttgagaagcactcacttagttGttttcagaaaggagttcaaataaaatcaattgtaaaaacaacagacttttcttgaagcctgcattaaacacttatttcccatggcttgctgagtactcccgtactcacccttgctctatataaataatccccccagttgctgaagaagatgaagcggatcctgctgatgaggagttcttccaagagcaagccggctacgatgagtattagggtttcggcctagttcccaagtcgcgcctgtgttgtttggtccaagtcctggcttccgtttcccttttgtaatgcagttgtgagctcGggatctgtccgcagcccaacatgactgtacctctactctataataaagagacctctgttgctgtgataatccgtcttcctatgataacaacactattttctgggactggtatcgattaacaggttaatttggagcgtcacgggctagtttcggtcggtactagtccggggcgtgacag