Variation ID: Kosh_IR64_DEL0460460

Variant Type:
Ref Genome:
Query Genome:
Chromosome:
Ref Start:
Ref End:
SV Length:
Query Start:
Query End:
Allele sv Count:
3901 bp
27268280
27272180
28
Gene_id Chromosome Start End
OsIR64_04g0021500 Chr04 27264102 27273790
SV_id Chromosome ref_start ref_end query_start query_end length
Kosh_127564_DEL0464290 Chr04 32126816 32130788 36595519 36599471 3953
Kosh_127652_DEL0471030 Chr04 32126816 32130788 27506235 27510140 3906
Kosh_127742_DEL0457320 Chr04 32126816 32130788 28910757 28914655 3899
Kosh_127742_DEL0457320_1 Chr04 32126816 32130788 36651429 36655379 3951
Kosh_132424_DEL0466100 Chr04 32126816 32130788 29792907 29796805 3899
Kosh_132424_DEL0466100_1 Chr04 32126816 32130788 37348875 37352825 3951
Kosh_G8_DEL0461480 Chr04 32126816 32130788 28619971 28623867 3897
Kosh_G8_DEL0461480_1 Chr04 32126816 32130788 36332839 36336789 3951
Kosh_HZ_DEL0458770 Chr04 32126816 32130788 29082424 29086322 3899
Kosh_HZ_DEL0458770_1 Chr04 32126816 32130788 36781794 36785744 3951
Kosh_IR64_DEL0460460 Chr04 32126816 32130788 27268280 27272180 3901
Kosh_IR64_DEL0460460_1 Chr04 32126816 32130788 34934297 34938247 3951
Kosh_J4155_DEL0426410 Chr04 32126816 32130788 34834223 34838172 3950
Kosh_J4155S_DEL0425530 Chr04 32126816 32130788 35458920 35462872 3953
Kosh_LK638S_DEL0461370 Chr04 32126816 32130788 36647822 36651776 3955
Kosh_R498_DEL0454740 Chr04 32126816 32130788 27802941 27806839 3899
Kosh_R498_DEL0454740_1 Chr04 32126816 32130788 35497799 35501749 3951
Kosh_R527_DEL0454440 Chr04 32126816 32130788 28383602 28387500 3899
Kosh_R527_DEL0454440_1 Chr04 32126816 32130788 36048984 36052934 3951
Kosh_R9311_DEL0462470 Chr04 32126816 32130788 28991510 28995361 3852
Kosh_R9311_DEL0462470_1 Chr04 32126816 32130788 36665546 36669491 3946
Kosh_S548_DEL0454610 Chr04 32126816 32130788 27864659 27868557 3899
Kosh_S548_DEL0454610_1 Chr04 32126816 32130788 35563473 35567423 3951
Kosh_WSSM_DEL0460960 Chr04 32126816 32130788 28471679 28475577 3899
Kosh_XL628S_DEL0461020 Chr04 32126816 32130788 28964745 28968641 3897
Kosh_XL628S_DEL0461020_1 Chr04 32126816 32130788 36800963 36804913 3951
Kosh_Y58S_DEL0446350 Chr04 32126816 32130788 36660589 36664539 3951
Kosh_YX1_DEL0458180 Chr04 32126816 32130788 27366337 27370235 3899

>Kosh_IR64_DEL0460460
TGTAGCGCCCGTTCCGTCGTGGCGCCTAGCGGGAAAATTATCTCTTAAAAACCCTAATTGCGAAATTTGTTTCTTTGCTTGTTGTCTAGTGTCCGTGCCATCTCAAGATCTCAAATCCCCGATATATCGTCGAGTTCAATTCCGAATCTAAATCCTTCCAAATCAAATCCCTCCGCAAAAGTCTATTTTGCCTCCCCCGGGGTCGATGGGCCGAATCTCTTTCGGCCCATCTCCCCCTCCCTCTCGGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTTCCCCTCGCTCTGCCCGCGCGTGCGCGAGCGCCGCGCCGAGCGCCCCCTCCCCCTCGCTCTCCTTCTCCCCATCCCTGGCGAGCTCCCCGCCCACGAAGCCGGCCCCGCGCGCCGTTGTTCGCGCGCGCGCCCGCGTGGTTGCCACCCGTGCCGCGCCGCCTGCGCCGTCCGCGTCACCCGGCCCCGCTGCCCTGCCGCGCCTGCAGCCGCTCGGCCCCGCAGCCAGCGCGCGTGCCCGAGCCGAGCCACTCAATCCGCCGCGCCTCCCGTTGCAAGCCGCGCGCGAGAGCCGTGGTGGCCGACCGCCTGGTCGCCACCATCGTCAGCGCCTGCCCGCGCCTGTCGCCCGTGTCACCGCCTCACCGTCATCACCGTCGTCATCGCCTCGGCCCCGCCACTCCGCGCGCAAGCCGCCAAGGGACGGAGGCAGAGCCCCTCCTCCCTCTACCACGTCGCCCCCGCTCCCCTCCTCCTTTTCCCAAAGAGGCAAGGGGCGAGCCCCCTTTCTCTCCCTCATTTTCCCCTTTTTCCCCCCGCCGGCGTCATCCTCCCTCCGTCTTGTCGCCGATTTGGCCGCGAGCGCCGAGCGCCAGCTCGCGCCTTGACCGCCCAAAGTCGGTTTCCAAACCGACATTGCCGCCCTTTAAACCCAGGCGCCCTCCCTTCCTCTTTCCCCCCAATCCTCCCCGTTTCTCGTCCGCGCCATTGCCGCCACCTCCTGTGCTCTGTCTCGCCTCCGCCGTTCATCGCCAAGCACCGGGAGAGCTGGTGCGTTCGTTGACGCGGAAGCGGAAGGGTACTCCGGGCGCTCGTCTTCCTCCTCTTCCCCGGCCCGAGGCCGGAGAGATCACTCCCGCGCCGTCAGCCTCTCGTCACAGCGCCCCGCCTCATCTCGGTAGTGCCTCCCTCCGTTCTTCCTCCTCGTTCCATCTTCCCCCCTTAGTTTTCGGTAGTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGATCGTTGCCGCTGCTCGCCGTGTGCCCGCCACCGTCGCCGCCCGTGCTCCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCGTAGCTCCGCCCAATCCGACGCTAGCAACGAATTCCCGTAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCCCTCCGCCGGGCGCCGCCGCCGCAATCCGCCGCCGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCACCGCCGCCCGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTAGGCGCCACGTCGGCGCCAGCTCGGCCGAGATCAGATCAGGCCGACCCCGGTCAGCCCCTCCCGTGCGCGCGTTCCACCGCGAGCCGTGAGGCTGCGCGTGGGCCCACCGCATCCGTTCCACCGCGAACCACGCGCGTGCACCGCATCCCTTCCCCGCCCGTGCGCGTGCGCCGCGTGCTCGCTCAGCACGGTGAACCGTGTCACCGACAAGCGGGTCCCACCCGGGACCACGCGTGGTGAGCCCGGTCCACCGGCCCTCCCTCTCCTCCCCTCCCGCGCGCGCGCTTGGGCCGCCTTGGGCCGGTCGGCCCATTTAGCTCGGCCGGACCGCTCCGTTTCTCTCGGGCCGTGCCCTAGCCGCCCGAGGAAAAGTCTATTATCCCTCCCTCTTTTCTTTTCTTTTTCAAAAAGGATTTAATTAAATTCTTTTCCTTTAGACCAAAAATCCAATAATCTTAGAAATTCAATATCTTCCCAACCGTAAATCCGTTTGACTCCGTTCCACTTCCAAAATTCCTCAAATCTCGAGATCTATCTAATGGCACGCTTAGAGGTCATTAATAGGGCTTTATTTTCGCCGTTTGTTGAGTTGTCCCGTTTCGCGTGTAGTTTCGGAGCCCGAAGACCCGCAGTGCGAGGATTTTGAGGATCAAGCTCCAGATTTCAAGCAAGGCAAGCCACCTTTGAACATCTTGAGCCTATATTTGAATTTAATTATATTGCTTGAAAAATATTATGCATTGATAGGATCGCACTTAATCTGTTTGTCCCGTCTGCAAGGCAGATTGGCGGACCTACCTAGTTTGTTGCATTTGATCCTTCCTTTGTTAATTGTTATACCATGTTCCCTTGTAACCACCCAGTTGCGCCTCGGGAATCGTGCACTCTGTGCGAGTACCGACGGTCGCCTTCAAACTTCAAATCTGAGTAACAACTTGGGTAAAACTTGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTTCCCGCTCTTGCACCTAAGGACCGTTTCCTTGGAATTTCATCCAAACATAAGACAAGTACGACCACATGGGTGGAATGGGACACTCCTGGCTGAGTAACTAGCTTATCAGGGGAGCCTTGATGCCGAGAGACATGTGGATTCGCCGGGGTGGTGTCGGGGAGGACCCCTGGGCTTCCTGGCACAGTATGGTCTGGGACCTAACCTGTTGTTGGTCTGGGACCCCTCTCGTCGGCATATGGTAAACCTGTGTCGGCTTTGGAAATGCCTTGTCATGAAAGCTTGGAGGTCTCCCGACGTGGCTGATCCCCACGGGCTGGGTGATCCGGGTTAGTAATGTCGTGTGGGTAAAGTGTACCCCCTCTGCAGAGGTTAACAAACTGTTCGAACAGCCGTGCCCACGGTCATGGGCGGATGTGAGGTGATTCCTAGCGTAGTTTTGTTTGACTACTGCTTGTGAAATTGCTGTTGTGGAAAGGGGTTCGATGTTTAAAAAATCTGCAGCTGATGGGATCAGCTAGGCCCGGGTGGCCGTTTGAAAGTTGTTGGCCCGGGTGGCCGTTTGAAAAGCTGTTGGCCGGGTGCCAACCTTGATTCAATTCTAAAGACTGATACATTGCACATACTCCGACCGGACAAGATGCACTGTCTCATCCGTGTCGTTTGAGAAGCACTCACTTAGTTGTTTTCAGAAAGGAGTTCAAATAAAATCAATTGTAAAAACAACAGCCTTTTCTTGAAGCCTGCATTAAACACTTATTTCCCATGGCTTGCTGAGTACTCCCGTACTCACCCTTGCTCTATATAAATAATCCCCCCCCAGTTGCTGAAGAAGATGAAGCGGATCCTGCTGATGAGGAGTTCTTCCAAGAGCAAGCCGGCTACGATGAGTATTAGGGTTTCGGCCTAGTTCCCAAGTCGCGCCTGTGTTGTTTGGTCCAAGTCCTGGCTTCCATTTCCCTTTTGTAATGCAGTTGTGAGCTCGGGATCTGTCCGCAGCCCAACATGACTGTACCTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATAATCCGTCTTCCTGTGATAACAGCACTATTTTCTGGGACTGGTATCGATTAACAGGTTAATTTGGAGCGTCACGGGCTAGTTCCGGTCGGTACTAGTCCGGGGCGTGACA

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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