Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: Kosh_II32_INS0107340

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr01

4009797

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3865892

3866426

29

Gene_id	Chromosome	Start	End
OsII32G0100431100.01	Chr01	3863287	3866488

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
Kosh_125619_INS0107640	Chr01	4009797	4009797	3948220	3948754	535
Kosh_127518_INS0106840	Chr01	4009797	4009797	3962533	3963067	535
Kosh_127564_INS0107660	Chr01	4009797	4009797	3877806	3878340	535
Kosh_127742_INS0107480	Chr01	4009797	4009797	3964052	3964586	535
Kosh_132424_INS0106520	Chr01	4009797	4009797	3897289	3897823	535
Kosh_Basmati1_INS0103740	Chr01	4009797	4009797	3913736	3914270	535
Kosh_D62_INS0107150	Chr01	4009797	4009797	3736873	3737407	535
Kosh_DG_INS0107470	Chr01	4009797	4009797	3730108	3730642	535
Kosh_FH838_INS0107140	Chr01	4009797	4009797	4231288	4231822	535
Kosh_FS32_INS0107390	Chr01	4009797	4009797	3879806	3880340	535
Kosh_G630_INS0107040	Chr01	4009797	4009797	3942339	3942873	535
Kosh_G8_INS0107320	Chr01	4009797	4009797	3966034	3966568	535
Kosh_HZ_INS0107210	Chr01	4009797	4009797	3973037	3973571	535
Kosh_II32_INS0107340	Chr01	4009797	4009797	3865892	3866426	535
Kosh_IR64_INS0106770	Chr01	4009797	4009797	3845676	3846210	535
Kosh_J4155_INS0105570	Chr01	4009797	4009797	3958666	3959200	535
Kosh_J4155S_INS0105550	Chr01	4009797	4009797	3971710	3972244	535
Kosh_LK638S_INS0104860	Chr01	4009797	4009797	4078992	4079526	535
Kosh_R527_INS0107520	Chr01	4009797	4009797	3957957	3958491	535
Kosh_R9311_INS0107450	Chr01	4009797	4009797	3958207	3958741	535
Kosh_S548_INS0107270	Chr01	4009797	4009797	3965902	3966436	535
Kosh_Tumba_INS0107450	Chr01	4009797	4009797	3872026	3872560	535
Kosh_WSSM_INS0107390	Chr01	4009797	4009797	3962184	3962718	535
Kosh_XL628S_INS0105870	Chr01	4009797	4009797	3861680	3862214	535
Kosh_Y3551_INS0107000	Chr01	4009797	4009797	3942328	3942862	535
Kosh_Y58S_INS0105410	Chr01	4009797	4009797	3959032	3959566	535
Kosh_YX1_INS0107390	Chr01	4009797	4009797	3866459	3866993	535
Kosh_ZS97RS3_INS0107350	Chr01	4009797	4009797	3876430	3876964	535
Kosh_MH63RS3_INS0107030	Chr01	4009797	4009797	3948257	3948791	535

>Kosh_II32_INS0107340
GGCCTGTTTGGTTGGCAACCTGAGTGATGTGCCTAAGAAAACTACATGCCTAAGAGGCATTAGCTATCCTGTCAAAACTTGCCTGATGAGGCTAGCCTGAGCAAATGTTGTTTGGTTAGTAGCCTAAGCCTGAGGAAACTAAATTGAGATTAGATGGTTCATAATTACATGGTTAAGGTAGATATTATTTAAATAAAACGGTATCTTATATCCTAATCTATCGCATATAAGCAAATGTTGTATTTTCGGTTCGTTTGCACCAACCAAGATTCAACAATAAAATATTCCAACACCTTTTGCATGCACAGTCGTGGGCCCGTGACAGGACAAGCTTGATTAGCGCGTTTTGTTTTGTGTAACTAGACTGAGCCAGGCGCTCGTTTTTGGTGGCCTGAGCTAGGCTAATGAACCTATCAGGTTTTTCAGGTCAGGCAGAGAATGAAACCATCAGGCTACCAACCAAACGACACAGGATATCCCTCAGGGACATATCAGGCCAGGCTCTTTTGGCTCAGGGCTTCAACCAAACAGCCCC

Variation ID: Kosh_II32_INS0107340

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os GJ-temp: Kosh | Kosh

Os XI-1A: II32 | II32

Chr01

4009797

4009797

SV Length:

Query Start:

Query End:

Allele sv Count:

535 bp

3865892

3866426

29