Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: KY131_02428_INS1112670

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr11

12066989

12069741

SV Length:

Query Start:

Query End:

Allele sv Count:

2748 bp

12104461

12107208

10 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
KY131_02428_INS1112670	Chr11	12066989	12069741	12104461	12107208	2748
KY131_117425_INS1114750	Chr11	12066989	12069741	11803836	11806589	2754
KY131_128077_INS1110880	Chr11	12066989	12069741	12183716	12186469	2754
KY131_Azucena_INS1107250	Chr11	12066989	12069741	12307532	12310284	2753
KY131_Basmati1_INS1113520	Chr11	12066989	12069741	12557500	12560253	2754
KY131_DHX2_INS1107760	Chr11	12066989	12069741	11828010	11830761	2752
KY131_FS32_INS1120570	Chr11	12066989	12069741	12560228	12562980	2753
KY131_G630_INS1122150	Chr11	12066989	12071394	13529536	13533953	4418
KY131_ZH11_INS1106110	Chr11	12066989	12069741	12041390	12044143	2754
KY131_MH63RS3_INS1121950	Chr11	12066989	12071394	13302701	13307119	4419

>KY131_02428_INS1112670
ATGATGAACCCTGAGTTCCTCTCAACACTCAAGGCTGTTGTTGGCCCGATCTTTTGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGTGCAGATCAACCCTATTCCTGCAAGCAAATTGAAGAAACAAGCAAGAACAAGAATAAAGCAATCTGATATTGCAAATAGTAATTTAATACAAATGATAAGTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGTGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAACCCAAAAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACCAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAAGAAACTTACAAGCCCATTGGCCCAATACAGGAGACGCAGCACCTTGCTTTGTGATTGCGGCCAAACGAGATAGATTTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTCGAGAACTTTCCGTCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCGGCCGTTTGAAGTCAGCAATGTAACACGTGGCTGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGTAATGGTCGTATCCATAGTAGCCATGGTCACATCATCCTCCCCTTCTTCACAGAAAACCGTCCTCGGTTTTTCCATATGGTGCTCTTCGCGCAGTCCACTGAAAACAACCTATTTCTTGCAATCAAAACAAGACAAACTCGAGACAATATGATTAGCAGTAACATGTCTCTCTAGCTTGCATATTTTATCCGGAACTACAAGATGTTCTAAATCTGAACAAATGTAAACTCTATGCACCAAAAATATTCCTCTATCATTATATTCGCCAAAGATATGAAAAATAGCATTAGTTGGACATGGCAAATCAGATTTAGCAAATAATTTCTCCTTCAAATTATCGAGCTCACAAAAATCATCAAACTGAACATAGCCCAAAGTATTTAAAGAAGATAGCAATTCGTGTTCCTCTACTTCATTAGCAATGTGAACAACATGCTTAGAATCAGCACACAAAGAAATAGTAGAACTAACATGTTCATTCACTAGTTGTGGCATGGATATAAGTGAAACATTATCACACAACTCTTCTTTATCACAAGGAACAGCAAGTAAATCAACTTGTGACAAAGGCAACTCAGTAATTGATTCCACTAATGGTTGATCTACTATAGCATGAAAAGTGGACAAGTGTAGCTCACCTTGAGAATACTCACCTTCATTTCTCTCAGCACCATTTAATTTACCTTGCGAACTTTCTTCAGATAATGTAGCTGCATCAGCCTTCTCCTCATTCGCGAGTGATGGAAGTGACATCTCAAAATATCGTTCTTCTCATTTTGGAGACTTTTCTGAACTTCCTGCAAAACATCAGTGATAGGAGGCACAAGCATATCTTGTTGCTCCATTGGATTCTCCAAAATTTTGCGCTCAACAATGCAAGCAAGCATGAACAATTGGCCTATATGATTATATGTCACATTAACAAGCCCAGCCTGAATATTGAAATTAAGCCCTCTGAAAAATCTAGTCATTGTGTTCTCATTTGATTCTTGTAAACCACTATAAGTGATACAAATTTTAAAATCATGAAAGTACTCCCTAACAGTTTTGTCACATTGTTTTAGATGTTCCCATTTCTCAAGGAGAGCACGTCTATAGTATGAAAACACAAATCTTTTTCTCATCAGTATTTTGCATTCATCCCAAGTTTCAAGCTTATTCCCCACAGTATGCCACCAAAAAGATGCAGAACCGGTACACTTATTACTAGCAGCCTTAATCATTTGAGCATTAGAAAAATCATACTCATCAAATTGTTTTTCTACTGCTAGCTCCCAATTAATGTATGCAGCGGAATCATACTTTTCATCATAGACTGGTAACTTACATGCAACTTGTGCAAAATTATAGTCATGTACCTCATATGCATCACGTGAAGAAGTCGTCATATCTCGTCGAAGGTGTAGATGTTGACGTGAGCATGACCATCCTGTTTCCCCTTGCGCAATCCTGCCATGGTTAGCAGCAAACAAGAAACATACACAAGAATATACACGCTCCTATCAACTACTAGGTACTGGCAGCTCAAATCTCACACACACTCAAGCTTTTAACCAAGCTCTTACAAGATCTTACCAATGCAAGTGGAATGGTGATGTACACCGACTCAACCAAGCACCCCAATAGAGGTTGGATATATCGATGCCTCGGTAAACACTTGCTGTACGGCTGCAATCAAATCTGTGGAGCTCTGGGTAGGCTTAAATATGTAGCAAAGGAATAGCAAATGCTCAAATCAGAGAACGCAAAGTTGAATAATTGTTCAAAGTCAAGTACCGTGCTGGTCCTAGGCTAGAACGTACTAAAGACGCGAGCCTAGACACAAACGGTACCACAAAATAGCACCAGAAACAACTCAAGCACACTCTGATGTATGAAGTTCAGCTCAAACAAAACAATATTTTCTCTTTTCTTTCTTTCTTCTTCTTCTTTTCTTTTTTTTTCCTTTTCTTTCTGATTTTTTTTGTGCGGCTTTTTTTTTTCTTTTTTTT