Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: J4155_R527_INS0439200

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Chr04

22837028

22840507

SV Length:

Query Start:

Query End:

Allele sv Count:

3509 bp

28383992

28387500

8 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
J4155_127742_INS0441860	Chr04	22837028	22840507	28911147	28914655	3509
J4155_G8_INS0438960	Chr04	22837028	22840507	28620361	28623867	3507
J4155_HZ_INS0441620	Chr04	22837028	22840507	29082814	29086322	3509
J4155_R498_INS0441130	Chr04	22837028	22840507	27803331	27806839	3509
J4155_R527_INS0439200	Chr04	22837028	22840507	28383992	28387500	3509
J4155_S548_INS0438870	Chr04	22837028	22840507	27865049	27868557	3509
J4155_WSSM_INS0439550	Chr04	22837028	22840507	28472069	28475577	3509
J4155_YX1_INS0442030	Chr04	22837028	22840507	27366727	27370235	3509

>J4155_R527_INS0439200
CCCCGCGCGCCGTTGTTCGCGCGCGCGCCCGCGTGGTTGCCACCCGTGCCGCGCCGCCTGCGCCGTCCGCGTCACCCGGCCCCGCTGCCCTGCCGCGCCTGCAGCCGCTCGGCCCCGCAGCCAGCGCGCGTGCCCGAGCCGAGCCACTCAATCCGCCGCGCCTCCCGTTGCAAGCCGCGCGCGAGAGCCGTGGTGGCCGACCGCCTGGTCGCCACCATCGTCAGCGCCTGCCCGCGCCTGTCGCCCGTGTCACCGCCTCACCGTCATCACCGTCGTCATCGCCTCGGCCCCGCCACTCCGCGCGCAAGCCGCCAAGGGACGGAGGCAGAGCCCCTCCTCCCTCTACCACGTCGCCCCCGCTCCCCTCCTCCTTTTCCCAAAGAGGCAAGGGGCGAGCCCCCTTTCTCTCCCTCATTTTCCCCTTTTTCCCCCCGCCGGCGTCATCCTCCCTCCGTCTTGTCGCCGATTTGGCCGCGAGCGCCGAGCGCCAGCTCGCGCCTTGACCGCCCAAAGTCGGTTTCCAAACCGACATTGCCGCCCTTTAAACCCAGGCGCCCTCCCTTCCTCTTTCCCCCCAATCCTCCCCGTTTCTCGTCCGCGCCATTGCCGCCACCTCCTGTGCTCTGTCTCGCCTCCGCCGTTCATCGCCAAGCACCGGGAGAGCTGGTGCGTTCGTTGACGCGGAAGCGGAAGGGTACTCCGGGCGCTCGTCTTCCTCCTCTTCCCCGGCCCGAGGCCGGAGAGATCACTCCCGCGCCGTCAGCCTCTCGTCACAGCGCCCCGCCTCATCTCGGTAGTGCCTCCCTCCGTTCTTCCTCCTCGTTCCATCTTCCCCCCTTAGTTTTCGGTAGTAGCACGAGTAGCCTCCCCGTAGCTAGCCGGCGCCGCCCCGATCGTTGCCGCTGCTCGCCGTGTGCCCGCCACCGTCGCCGCCCGTGCTCCGTAGCACCCGCTCGTCGCCGGCCTCGCTCGGCGTAGCTCCGCCCAATCCGACGCTAGCAACGAATTCCCGTAGCCGCGTAGATGCTCTCACCGCCGGGAATTGGCCCCTCGTGACCTCGTCGCCGTTTCCCCCTTTTCCCTCCGCCGGGCGCCGCCGCCGCAATCCGCCGCCGACGGACTCCCTCCGGCGAATCCAAGCCGTTGGCTCGCTCCCTCTCATTCTCCCTCGTCATCCCGGTGTACGCCCCGTCGCCCCTCATCGTCGCAAGGCGTCCCGGAGAAACCACCGCCGCCCGCCGTCCATTCGCGGCCGGCGCCTTCGTCTTCCTCCCGCCAGCCCGCGTGGCAGCCACGTAGGCGCCACGTCGGCGCCAGCTCGGCCGAGATCAGATCAGGCCGACCCCGGTCAGCCCCTCCCGTGCGCGCGTTCCACCGCGAGCCGTGAGGCTGCGCGTGGGCCCACCGCATCCGTTCCACCGCGAACCACGCGCGTGCACCGCATCCCTTCCCCGCCCGTGCGCGTGCGCCGCGTGCTCGCTCAGCACGGTGAACCGTGTCACCGACAAGCGGGTCCCACCCGGGACCACGCGTGGTGAGCCCGGTCCACCGGCCCTCCCTCTCCTCCCCTCCCGCGCGCGCGCTTGGGCCGCCTTGGGCCGGTCGGCCCATTTAGCTCGGCCGGACCGCTCCGTTTCTCTCGGGCCGTGCCCTAGCCGCCCGAGGAAAAGTCTATTATCCCTCCCTCTTTTCTTTTCTTTTTCAAAAAGGATTTAATTAAATTCTTTTCCTTTAGACCAAAAATCCAATAATCTTAGAAATTCAATATCTTCCCAACCGTAAATCCGTTTGACTCCGTTCCACTTCCAAAATTCCTCAAATCTCGAGATCTATCTAATGGCACGCTTAGAGGTCATTAATAGGGCTTTATTTTCGCCGTTTGTTGAGTTGTCCCGTTTCGCGTGTAGTTTCGGAGCCCGAAGACCCGCAGTGCGAGGATTTTGAGGATCAAGCTCCAGATTTCAAGCAAGGCAAGCCACCTTTGAACATCTTGAGCCTATATTTGAATTTAATTATATTGCTTGAAAAATATTATGCATTGATAGGATCGCACTTAATCTGTTTGTCCCGTCTGCAAGGCAGATTGGCGGACCTACCTAGTTTGTTGCATTTGATCCTTCCTTTGTTAATTGTTATACCATGTTCCCTTGTAACCACCCAGTTGCGCCTCGGGAATCGTGCACTCTGTGCGAGTACCGACGGTCGCCTTCAAACTTCAAATCTGAGTAACAACTTGGGTAAAACTTGGGTTTTACAAAAGACTTGGAAAACCCGACACCTGGGTCGGTGCTTGCGAACTAAATGAATTTCCAAAACCGCGGACCGGGGAACGTACCGGGTGTACGGTTTTCCCGCTCTTGCACCTAAGGACCGTTTCCTTGGAATTTCATCCAAACATAAGACAAGTACGACCACATGGGTGGAATGGGACACTCCTGGCTGAGTAACTAGCTTATCAGGGGAGCCTTGATGCCGAGAGACATGTGGATTCGCCGGGGTGGTGTCGGGGAGGACCCCTGGGCTTCCTGGCACAGTATGGTCTGGGACCTAACCTGTTGTTGGTCTGGGACCCCTCTCGTCGGCATATGGTAAACCTGTGTCGGCTTTGGAAATGCCTTGTCATGAAAGCTTGGAGGTCTCCCGACGTGGCTGATCCCCACGGGCTGGGTGATCCGGGTTAGTAATGTCGTGTGGGTAAAGTGTACCCCCTCTGCAGAGGTTAACAAACTGTTCGAACAGCCGTGCCCACGGTCATGGGCGGATGTGAGGTGATTCCTAGCGTAGTTTTGTTTGACTACTGCTTGTGAAATTGCTGTTGTGGAAAGGGGTTCGATGTTTAAAAAATCTGCAGCTGATGGGATCAGCTAGGCCCGGGTGGCCGTTTGAAAGTTGTTGGCCCGGGTGGCCGTTTGAAAAGCTGTTGGCCGGGTGCCAACCTTGATTCAATTCTAAAGACTGATACATTGCACATACTCCGACCGGACAAGATGCACTGTCTCATCCGTGTCGTTTGAGAAGCACTCACTTAGTTGTTTTCAGAAAGGAGTTCAAATAAAATCAATTGTAAAAACAACAGCCTTTTCTTGAAGCCTGCATTAAACACTTATTTCCCATGGCTTGCTGAGTACTCCCGTACTCACCCTTGCTCTATATAAATAATCCCCCCCCAGTTGCTGAAGAAGATGAAGCGGATCCTGCTGATGAGGAGTTCTTCCAAGAGCAAGCCGGCTACGATGAGTATTAGGGTTTCGGCCTAGTTCCCAAGTCGCGCCTGTGTTGTTTGGTCCAAGTCCTGGCTTCCATTTCCCTTTTGTAATGCAGTTGTGAGCTCGGGATCTGTCCGCAGCCCAACATGACTGTACCTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATAATCCGTCTTCCTGTGATAACAGCACTATTTTCTGGGACTGGTATCGATTAACAGGTTAATTTGGAGCGTCACGGGCTAGTTCCGGTCGGTACTAGTCCGGGGCGTGACA