Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: J4155S_125827_INS0313960

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-adm: Jing4155S | J4155S

Os XI-3B2: LIU XU | Os125827RS1

Chr03

27275307

27275557

SV Length:

Query Start:

Query End:

Allele sv Count:

250 bp

15803832

15804081

26 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
J4155S_125619_INS0312620	Chr03	27275307	27275557	15684179	15684428	250
J4155S_125827_INS0313960	Chr03	27275307	27275557	15803832	15804081	250
J4155S_127518_INS0321710	Chr03	27275307	27275557	15799574	15799823	250
J4155S_127564_INS0314770	Chr03	27275307	27275557	15761449	15761698	250
J4155S_132424_INS0320600	Chr03	27275307	27275557	16009542	16009791	250
J4155S_Basmati1_INS0329680	Chr03	27275307	27275557	15613020	15613269	250
J4155S_CN1_INS0312260	Chr03	27275307	27275557	15696181	15696430	250
J4155S_D62_INS0305910	Chr03	27275307	27275557	15446633	15446882	250
J4155S_DG_INS0319160	Chr03	27275307	27275557	14949588	14949837	250
J4155S_FH838_INS0312560	Chr03	27275307	27275557	15535005	15535254	250
J4155S_FS32_INS0308760	Chr03	27275307	27275557	15781934	15782183	250
J4155S_G630_INS0313610	Chr03	27275307	27275557	15643623	15643872	250
J4155S_HZ_INS0312070	Chr03	27275307	27275557	15791893	15792142	250
J4155S_II32_INS0318460	Chr03	27275307	27275557	15530698	15530947	250
J4155S_Lemont_INS0333020	Chr03	27275307	27275557	15393281	15393530	250
J4155S_R498_INS0317690	Chr03	27275307	27275557	15601692	15601941	250
J4155S_R527_INS0317700	Chr03	27275307	27275557	15695336	15695585	250
J4155S_R9311_INS0312020	Chr03	27275307	27275557	15799133	15799382	250
J4155S_S548_INS0312150	Chr03	27275307	27275557	15766406	15766655	250
J4155S_TM_INS0311130	Chr03	27275307	27275557	15700511	15700760	250
J4155S_Tumba_INS0315200	Chr03	27275307	27275557	15721888	15722137	250
J4155S_WSSM_INS0317400	Chr03	27275307	27275557	15604188	15604437	250
J4155S_Y58S_INS0311950	Chr03	27275307	27275557	15640914	15641163	250
J4155S_YX1_INS0309130	Chr03	27275307	27275557	15601411	15601660	250
J4155S_ZS97RS3_INS0318340	Chr03	27275307	27275557	15679956	15680205	250
J4155S_MH63RS3_INS0320690	Chr03	27275307	27275557	15759766	15760015	250

>J4155S_125827_INS0313960
tactccctccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaattatatgtctacataaaaatatatttaacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaacatttcaaaacggagagagtattatatatatt