Rice Gene Index: a comprehensive database for homology, collinearity, and transcripts of genes in rice pangenome.

Variation ID: II32_125827_INS0514110

Variant Type:

Ref Genome:

Query Genome:

Chromosome:

Ref Start:

Ref End:

INS

Os XI-1A: II32 | II32

Os XI-3B2: LIU XU | Os125827RS1

Chr05

26333122

26336068

SV Length:

Query Start:

Query End:

Allele sv Count:

2985 bp

7284939

7287923

25 There is no gene in this region.

SV_id	Chromosome	ref_start	ref_end	query_start	query_end	length
II32_117534_INS0534530	Chr05	26333122	26336068	7197681	7200662	2982
II32_125619_INS0514880	Chr05	26333122	26336068	7159014	7161995	2982
II32_125827_INS0514110	Chr05	26333122	26336068	7284939	7287923	2985
II32_127518_INS0515670	Chr05	26333122	26336068	7378611	7381595	2985
II32_127652_INS0540010	Chr05	26333122	26336068	7328677	7331660	2984
II32_132424_INS0508540	Chr05	26333122	26336068	7309561	7312545	2985
II32_CN1_INS0507100	Chr05	26333122	26336068	7301196	7304180	2985
II32_D62_INS0512580	Chr05	26333122	26336068	7248954	7251938	2985
II32_FH838_INS0513190	Chr05	26333122	26336068	7542819	7545803	2985
II32_FS32_INS0507120	Chr05	26333122	26336068	7223626	7226610	2985
II32_G46_INS0509230	Chr05	26333122	26336068	7242724	7245708	2985
II32_HZ_INS0513850	Chr05	26333122	26336068	7461844	7464828	2985
II32_J4155_INS0509060	Chr05	26333122	26336068	7395303	7398287	2985
II32_J4155S_INS0509330	Chr05	26333122	26336068	7503236	7506220	2985
II32_LK638S_INS0507120	Chr05	26333122	26336068	7361135	7364119	2985
II32_R498_INS0516450	Chr05	26333122	26336068	7626276	7629260	2985
II32_R9311_INS0508510	Chr05	26333122	26336068	7253893	7256877	2985
II32_S548_INS0508790	Chr05	26333122	26336068	7379687	7382671	2985
II32_Tumba_INS0515650	Chr05	26333122	26336068	7616785	7619768	2984
II32_WSSM_INS0510760	Chr05	26333122	26336068	7452265	7455225	2961
II32_XL628S_INS0507230	Chr05	26333122	26336068	7351315	7354299	2985
II32_Y3551_INS0507290	Chr05	26333122	26336068	7388934	7391918	2985
II32_YX1_INS0513130	Chr05	26333122	26336068	7496119	7499103	2985
II32_ZS97RS3_INS0507440	Chr05	26333122	26336068	7306332	7309316	2985
II32_MH63RS3_INS0509370	Chr05	26333122	26336068	7462862	7465846	2985

>II32_125827_INS0514110
tgtcacgcccggaatttctatccaaaattccaaacgcttacatgtgtgtgaaccctcgtccaggaatcagccgaggcacacaataacaaattgataatagagtacaattattactctaattaataagcgtataaaatgtcattacagaggtagatagttcctctcaatcaataaagatctaagcagcggaaaataaaataaacggcgcaaacggctccactccataggcagtttgaccagggctacacctaatcctccacaccatcagcttcactgtagaactcttcctctgatgaatgattgcaaggtgagtatatgatatactcagcaagccacgcagcaaatatgcaagtgcacaggataacaaaggatggcatagtagggtttcatttgcaaaagcagcatttagcaaacatttgagaatttaataaaatagttaagtaattaaacaatattaatccaacgctatacaacataccctgttgtataggcccaaccattctgaacaaccatcccggctgcacagttctatctccaaaccaggaatataccattccaaaccaggagctaatcaaattattaccaattaaagcaccttttattatgatgagaagggtgagaccaatcacgaaagacattgttagacccgcccataaccgcgggcacggctattcgaatagttttactctgatcagaggtgtaccactgtacccacaagacacaaccccacatcatgtcaccatgtgcctcaataccaccacggtacctcggaaaggagttgtgacaataccccttgcataacacaatccactgcagcgcaccttcctggatcataatcacccccttataaacaaggcatggactccccagcgacccccgtgggcttatctccgccacttctcagtctggtgccccgcaatgaaccatgctatacaaaagataaagccgttgcccacgctggcttgtggttggcacggttaatgtttcacaaccgaaactcgtgaaccggtccttaattgtcatgagcacaaccatcaaaaccatgtgctcacaacccaccattaccaggttttagttggcaaataattaattaacaaatcacgattggccatcgtgaactatcattaagccatcattaaattatagtgattcataagttatcccaatagtgtgctaatgtttctaagcagggctaagcaattatatctaatacatctagttgaaccaacatatagagctcaactagtcaagttataataacccaaggtatcaaggaataaggtaatcaagaacaaaagggctataacaaacaataggttaattccacccaatgacattcgaaaataaatgcaatagttgaaaagaaacaatagctttaaataggatcaacatgctcaaagggttgtttgggatctgtgtgacttgccttgctggccttggaactcttcaaactcttctccggcgaaaacggactctccggaaacgacggaatctaagcagaaagaagcaaaatcaccaaaacagcacataaacaagcatgaacagtacatgtggatatttttaacatgtagatctcaattttagaaaaatttagagacttaaaccaactaaatcggagctaagatgaattagttatgaatttttaaaagattaaatcggattaaaacacttaaattgattttgattgaattatgacgcaataatgaattatttttgaaaaggaaaagaggatttattgcgtcagcggctagggtttcggtggaccggacgcacgggcgacggctcacgcgaacggacggccgagatcgacttgatccaaaacggacggccgagatcgaacggtccacgaccggctcacagcgaacggccccgatgacgtcggcgatgacgtcaccaccggcggcggcggctcgggcttgcatgctcgccggcgaacgacggcacggcggcgcgaacggaaggcaccaacaggtagagcgcaatgcggcgaactcaccggtgaccaaaagagcggcggaagatcaacagacggcgacggcgacgaggaggaagcggcggcaaacttcgggtcgacggcggcgacggtgctccggcggtcttcggcggcggcgaaggagcggacgagaacggcggcaacttggcgatcacgacggtggccttgccgagcgatgatgacgaccgagacggcggcggcgcacggctggagcgacggctacgacggcggcgctaggttgcacggcgctagaactcttccggcgacgagaggcgaaggcgaaggtggcgacgggtagaggagacaccggggaaccttttaaaggggctcggaggcgacggcgaaggcccacggcgactggcgacgagaaggaaggtttagggttcggaggagagagacgaatccgattcgaactcgattccaacgatttccaaaacgaattagccgatgtttccaaaagagaaaaggtagaggaaatcccggagattgtttcccctctatcaattcggccggaaacggaaaggatcgatcgaatttggaagggaacggcggcggcgcgaaactagggtttcgggcggcggcggccggagattgacgacgaccctgacaggtgggccccacctgtcagcgggcggatgcgcgcgcgcgcggcggcggactgggccggactgggccgaggagagagagagagcggttttgggccgactttcggcccaaagccaaaagagactttttaaaacctttttcaatttaaattattcatgaaatgcaattccatttattaaaaatacttccttagctcaaataaatcccagaaaaatctaggaattatagaattaagcaaagtatttaatgaaattttatctggccccattttatattggaatttattaattaaaaaattagatcttctcttcaagacttttaaaattatttctaaaaattccaattaaacaaccatttatatattttgaatttttagggtgtgacaa